BLASTX nr result

ID: Glycyrrhiza23_contig00025115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025115
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541714.1| PREDICTED: glutamate receptor 2.7-like [Glyc...   235   3e-60
ref|XP_003541713.1| PREDICTED: glutamate receptor 2.7-like [Glyc...   235   3e-60
ref|XP_003593708.1| Glutamate-gated kainate-type ion channel rec...   211   4e-53
ref|XP_003593705.1| Glutamate receptor 2.7 [Medicago truncatula]...   206   2e-51
ref|XP_003593706.1| Glutamate receptor 2.9 [Medicago truncatula]...   202   3e-50

>ref|XP_003541714.1| PREDICTED: glutamate receptor 2.7-like [Glycine max]
          Length = 914

 Score =  235 bits (599), Expect = 3e-60
 Identities = 119/150 (79%), Positives = 128/150 (85%)
 Frame = -1

Query: 452 LAAKAQVPTISFSAPPLVPPLMHLRWPYLIQMAKNQTAHMNCIADIIHACNWQKVIAIYE 273
           L  KAQ+P ISFS+P +VPPLM  RWP+LIQMAK+Q AHMNCIADIIHA NWQKVIAIYE
Sbjct: 120 LGNKAQIPIISFSSPSIVPPLMQHRWPFLIQMAKDQAAHMNCIADIIHAYNWQKVIAIYE 179

Query: 272 DDPYSGDSGMLSLLSEALQKVNSQIEYRLVLPPFTSLSDPKGVVLDEXXXXXXXXSRVFI 93
           D+PYSGDSG+LSL SEALQK N+QIE RLVLP FTSLSDPKGVVLDE        SRVF+
Sbjct: 180 DNPYSGDSGLLSLFSEALQKGNAQIENRLVLPHFTSLSDPKGVVLDELFKLLPLKSRVFV 239

Query: 92  VLQASLPMVTHLFREAKKIGFLEKDSAWII 3
           VLQAS PMVTHLFREAKKIGFL KDSAWII
Sbjct: 240 VLQASFPMVTHLFREAKKIGFLGKDSAWII 269


>ref|XP_003541713.1| PREDICTED: glutamate receptor 2.7-like [Glycine max]
          Length = 926

 Score =  235 bits (599), Expect = 3e-60
 Identities = 119/150 (79%), Positives = 128/150 (85%)
 Frame = -1

Query: 452 LAAKAQVPTISFSAPPLVPPLMHLRWPYLIQMAKNQTAHMNCIADIIHACNWQKVIAIYE 273
           L  KAQ+P ISFS+P +VPPLM  RWP+LIQMAK+Q AHMNCIADIIHA NWQKVIAIYE
Sbjct: 124 LGNKAQIPIISFSSPSIVPPLMQHRWPFLIQMAKDQAAHMNCIADIIHAYNWQKVIAIYE 183

Query: 272 DDPYSGDSGMLSLLSEALQKVNSQIEYRLVLPPFTSLSDPKGVVLDEXXXXXXXXSRVFI 93
           D+PYSGDSG+LSL SEALQK N+QIE RLVLP FTSLSDPKGVVLDE        SRVF+
Sbjct: 184 DNPYSGDSGLLSLFSEALQKGNAQIENRLVLPHFTSLSDPKGVVLDELLKLLPLKSRVFV 243

Query: 92  VLQASLPMVTHLFREAKKIGFLEKDSAWII 3
           VLQAS PMVTHLFREAKKIGFL KDSAWII
Sbjct: 244 VLQASFPMVTHLFREAKKIGFLGKDSAWII 273


>ref|XP_003593708.1| Glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Medicago truncatula] gi|355482756|gb|AES63959.1|
           Glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Medicago truncatula]
          Length = 635

 Score =  211 bits (538), Expect = 4e-53
 Identities = 110/149 (73%), Positives = 122/149 (81%), Gaps = 1/149 (0%)
 Frame = -1

Query: 446 AKAQVPTISFSAPPLVPPL-MHLRWPYLIQMAKNQTAHMNCIADIIHACNWQKVIAIYED 270
           AK Q+PTISFS+PPLV    M  RWP+LIQMA+N +A MN +ADI+H  N QKVIAIYED
Sbjct: 122 AKFQIPTISFSSPPLVSSSSMQFRWPFLIQMAQNHSAQMNFLADIVHGFNSQKVIAIYED 181

Query: 269 DPYSGDSGMLSLLSEALQKVNSQIEYRLVLPPFTSLSDPKGVVLDEXXXXXXXXSRVFIV 90
           +PYS D GML+LLSEAL+KVNS+IEYRLVLPPFTSLSDPKG VLDE        SRVFIV
Sbjct: 182 NPYSSDFGMLNLLSEALEKVNSKIEYRLVLPPFTSLSDPKGFVLDELLKLLRLKSRVFIV 241

Query: 89  LQASLPMVTHLFREAKKIGFLEKDSAWII 3
           LQASLPMV HLFREAKKIG LEK+S WII
Sbjct: 242 LQASLPMVNHLFREAKKIGLLEKESTWII 270


>ref|XP_003593705.1| Glutamate receptor 2.7 [Medicago truncatula]
           gi|355482753|gb|AES63956.1| Glutamate receptor 2.7
           [Medicago truncatula]
          Length = 939

 Score =  206 bits (523), Expect = 2e-51
 Identities = 110/150 (73%), Positives = 120/150 (80%)
 Frame = -1

Query: 452 LAAKAQVPTISFSAPPLVPPLMHLRWPYLIQMAKNQTAHMNCIADIIHACNWQKVIAIYE 273
           + A  QVPTISFS+  +   LM LRWP+LIQMA+NQTA M  I+DIIHA N QKVIAIYE
Sbjct: 118 VGAMFQVPTISFSSSLVPSSLMQLRWPFLIQMAQNQTAQMKFISDIIHAFNSQKVIAIYE 177

Query: 272 DDPYSGDSGMLSLLSEALQKVNSQIEYRLVLPPFTSLSDPKGVVLDEXXXXXXXXSRVFI 93
           D+PY+ DSG LSLLSEALQKVNSQIEY+LVLP FTSLSDPKG VLDE        SRVFI
Sbjct: 178 DNPYNSDSGRLSLLSEALQKVNSQIEYQLVLPSFTSLSDPKGFVLDELLKLLPLKSRVFI 237

Query: 92  VLQASLPMVTHLFREAKKIGFLEKDSAWII 3
           VLQASL MV HLFREAKKIG LEK+S WII
Sbjct: 238 VLQASLAMVNHLFREAKKIGLLEKESTWII 267


>ref|XP_003593706.1| Glutamate receptor 2.9 [Medicago truncatula]
           gi|355482754|gb|AES63957.1| Glutamate receptor 2.9
           [Medicago truncatula]
          Length = 947

 Score =  202 bits (513), Expect = 3e-50
 Identities = 107/150 (71%), Positives = 119/150 (79%)
 Frame = -1

Query: 452 LAAKAQVPTISFSAPPLVPPLMHLRWPYLIQMAKNQTAHMNCIADIIHACNWQKVIAIYE 273
           + A  QVPTISFS+P +   L   RWP+LIQMA+NQTA +N I+ IIHA N QKVIAIYE
Sbjct: 119 VGAMFQVPTISFSSPLVPSSLTQTRWPFLIQMAQNQTAQINFISGIIHAFNSQKVIAIYE 178

Query: 272 DDPYSGDSGMLSLLSEALQKVNSQIEYRLVLPPFTSLSDPKGVVLDEXXXXXXXXSRVFI 93
           ++PY+ D GMLSLLSEALQKVNSQIEY+LVLPPFTSLSDPKG VLDE        SRVFI
Sbjct: 179 ENPYNSDFGMLSLLSEALQKVNSQIEYQLVLPPFTSLSDPKGFVLDELLKLLRLKSRVFI 238

Query: 92  VLQASLPMVTHLFREAKKIGFLEKDSAWII 3
           VLQASLPMV  LFREA KIG LEK+S WII
Sbjct: 239 VLQASLPMVIQLFREANKIGLLEKESTWII 268


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