BLASTX nr result

ID: Glycyrrhiza23_contig00025089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025089
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544368.1| PREDICTED: uncharacterized protein LOC100818...   439   e-121
ref|XP_003616296.1| DNA repair protein complementing XP-C cells-...   438   e-121
ref|XP_002531915.1| DNA repair protein xp-C / rad4, putative [Ri...   345   5e-93
ref|XP_002275277.1| PREDICTED: DNA repair protein complementing ...   337   1e-90
ref|XP_002305874.1| predicted protein [Populus trichocarpa] gi|2...   336   3e-90

>ref|XP_003544368.1| PREDICTED: uncharacterized protein LOC100818100 [Glycine max]
          Length = 926

 Score =  439 bits (1130), Expect = e-121
 Identities = 209/233 (89%), Positives = 222/233 (95%)
 Frame = -1

Query: 702  LRGLESGATGGVVHSRTNQIVATEANMNDSFVPTRSSLEDIELETRALTEPLPTNQQAYK 523
            LR LESGATGGV H  TNQI++TE+NMNDS VPTRSS+EDIELETRALTEPLPTNQQAYK
Sbjct: 551  LRDLESGATGGVAHLGTNQIISTESNMNDSVVPTRSSIEDIELETRALTEPLPTNQQAYK 610

Query: 522  SHPLYAIEKWLTKYQVLHPKGPVLGFCSGHPVYPRTCVQTVKTRERWLREGLQVKPNEHP 343
            SHPLYAIEKWLTKYQVLHPKGPVLGFCSGHPVYPRTCVQTVKT+ERWLREGLQVKPNEHP
Sbjct: 611  SHPLYAIEKWLTKYQVLHPKGPVLGFCSGHPVYPRTCVQTVKTKERWLREGLQVKPNEHP 670

Query: 342  VKELQRSIKPQKGQDFEAEDYGCAADSKEDIKLYGQWQLEPLNLPHAVNGIVPKNDRGQV 163
            VK+LQRS+KPQK QD EA+DYGC  DS E IKLYG+WQLEPLNLPHAVNGIVPKN+RGQV
Sbjct: 671  VKDLQRSMKPQKVQDSEADDYGC-TDSIEQIKLYGKWQLEPLNLPHAVNGIVPKNERGQV 729

Query: 162  DVWSEKCLPPGTVHLRFPRAYSVAKRLEIDYAPAMVGFEFKNGRSYPVYDGIV 4
            DVWSEKCLPPGTVHLRFP+A+SVAKRLEIDYAPAMVGFEFKNGRSYPV+DGIV
Sbjct: 730  DVWSEKCLPPGTVHLRFPKAFSVAKRLEIDYAPAMVGFEFKNGRSYPVFDGIV 782


>ref|XP_003616296.1| DNA repair protein complementing XP-C cells-like protein [Medicago
            truncatula] gi|355517631|gb|AES99254.1| DNA repair
            protein complementing XP-C cells-like protein [Medicago
            truncatula]
          Length = 1052

 Score =  438 bits (1127), Expect = e-121
 Identities = 207/233 (88%), Positives = 220/233 (94%)
 Frame = -1

Query: 702  LRGLESGATGGVVHSRTNQIVATEANMNDSFVPTRSSLEDIELETRALTEPLPTNQQAYK 523
            LR LESGATGGVVHSRTNQI ATEANMNDSFVPTRSS+ED+ELETRALTEPLPTNQQAYK
Sbjct: 677  LRNLESGATGGVVHSRTNQISATEANMNDSFVPTRSSIEDVELETRALTEPLPTNQQAYK 736

Query: 522  SHPLYAIEKWLTKYQVLHPKGPVLGFCSGHPVYPRTCVQTVKTRERWLREGLQVKPNEHP 343
            +H LY IEKWLTKYQ+LHPKGPVLGFCSGHPVYPRTCVQTV T+ERWLREGLQVKPNEHP
Sbjct: 737  NHSLYVIEKWLTKYQILHPKGPVLGFCSGHPVYPRTCVQTVMTKERWLREGLQVKPNEHP 796

Query: 342  VKELQRSIKPQKGQDFEAEDYGCAADSKEDIKLYGQWQLEPLNLPHAVNGIVPKNDRGQV 163
             KEL+RSIKPQK QDFEA+DY C  DSKE+IKLYG+WQLEPLNLPHAVNGIVPKN+RGQV
Sbjct: 797  AKELKRSIKPQKVQDFEADDYDCTTDSKENIKLYGKWQLEPLNLPHAVNGIVPKNERGQV 856

Query: 162  DVWSEKCLPPGTVHLRFPRAYSVAKRLEIDYAPAMVGFEFKNGRSYPVYDGIV 4
            DVWSEKCLPPGTVHLRF  AYSVAKRLEID APAMVGFEFKNGR++PVY+GIV
Sbjct: 857  DVWSEKCLPPGTVHLRFRSAYSVAKRLEIDSAPAMVGFEFKNGRAHPVYNGIV 909


>ref|XP_002531915.1| DNA repair protein xp-C / rad4, putative [Ricinus communis]
            gi|223528425|gb|EEF30459.1| DNA repair protein xp-C /
            rad4, putative [Ricinus communis]
          Length = 683

 Score =  345 bits (885), Expect = 5e-93
 Identities = 170/234 (72%), Positives = 194/234 (82%), Gaps = 1/234 (0%)
 Frame = -1

Query: 702  LRGLESGATGGV-VHSRTNQIVATEANMNDSFVPTRSSLEDIELETRALTEPLPTNQQAY 526
            LR LESGATGG  V  R   I   E++  +SFV TR+SLED+ELETRALTEPLPTNQQAY
Sbjct: 421  LRELESGATGGPEVPERKTDI---ESSGRNSFVSTRTSLEDMELETRALTEPLPTNQQAY 477

Query: 525  KSHPLYAIEKWLTKYQVLHPKGPVLGFCSGHPVYPRTCVQTVKTRERWLREGLQVKPNEH 346
            K+H LYAIE+WLTKYQ+LHP+GPVLGFCSGHPVYPR CVQT+KT  RWLREGLQ+K NE 
Sbjct: 478  KNHQLYAIERWLTKYQILHPRGPVLGFCSGHPVYPRACVQTLKTEHRWLREGLQIKANEC 537

Query: 345  PVKELQRSIKPQKGQDFEAEDYGCAADSKEDIKLYGQWQLEPLNLPHAVNGIVPKNDRGQ 166
            P K L++S   +K +  E +DY    D K +I+LYG+WQLEPL LPHAVNGIVPKN+RGQ
Sbjct: 538  PTKVLKQSANLKKVKSSEDDDYS-EVDPKGNIELYGKWQLEPLQLPHAVNGIVPKNERGQ 596

Query: 165  VDVWSEKCLPPGTVHLRFPRAYSVAKRLEIDYAPAMVGFEFKNGRSYPVYDGIV 4
            VDVWSEKCLPPGTVHLR PR + VAKRLEIDYAPAMVGFEFKNGRS P+++GIV
Sbjct: 597  VDVWSEKCLPPGTVHLRLPRVFHVAKRLEIDYAPAMVGFEFKNGRSVPIFEGIV 650


>ref|XP_002275277.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Vitis
            vinifera]
          Length = 1103

 Score =  337 bits (865), Expect = 1e-90
 Identities = 167/234 (71%), Positives = 193/234 (82%), Gaps = 1/234 (0%)
 Frame = -1

Query: 702  LRGLESGATGGVVHSRTN-QIVATEANMNDSFVPTRSSLEDIELETRALTEPLPTNQQAY 526
            L+ LE+GA GGV   + N + V  E++  ++FV TR SLED+ELETRALTEPLPTNQQAY
Sbjct: 730  LKELEAGAVGGVEVLKENVKKVRAESSDRNAFVATRDSLEDMELETRALTEPLPTNQQAY 789

Query: 525  KSHPLYAIEKWLTKYQVLHPKGPVLGFCSGHPVYPRTCVQTVKTRERWLREGLQVKPNEH 346
            K+H LYA+E+WLTKYQ+LHPKGPVLGFCSGHPVYPRTCVQT+KT++RWLREGLQVK +EH
Sbjct: 790  KNHQLYAMERWLTKYQILHPKGPVLGFCSGHPVYPRTCVQTLKTKQRWLREGLQVKADEH 849

Query: 345  PVKELQRSIKPQKGQDFEAEDYGCAADSKEDIKLYGQWQLEPLNLPHAVNGIVPKNDRGQ 166
            P K L+ S K  K Q  EA DYG  AD    I LYG+WQ+EPL LP AVNGIVPKN+ GQ
Sbjct: 850  PTKVLKCSSKLSKVQALEAVDYG-DADPGGTIALYGRWQMEPLCLPCAVNGIVPKNEWGQ 908

Query: 165  VDVWSEKCLPPGTVHLRFPRAYSVAKRLEIDYAPAMVGFEFKNGRSYPVYDGIV 4
            VDVWSEKCLPPGTVHLR PR   +AK+LEID+APAMVGFEF+NGRS PV+DGIV
Sbjct: 909  VDVWSEKCLPPGTVHLRVPRVVPIAKKLEIDFAPAMVGFEFRNGRSIPVFDGIV 962


>ref|XP_002305874.1| predicted protein [Populus trichocarpa] gi|222848838|gb|EEE86385.1|
            predicted protein [Populus trichocarpa]
          Length = 868

 Score =  336 bits (861), Expect = 3e-90
 Identities = 167/239 (69%), Positives = 193/239 (80%), Gaps = 6/239 (2%)
 Frame = -1

Query: 702  LRGLESGATGGVVHSRTNQIVATEANMN------DSFVPTRSSLEDIELETRALTEPLPT 541
            LR LESGATGG+ H       A+  + N      +SF  TR+++ED+EL+TRALTEPLPT
Sbjct: 495  LRELESGATGGMAHLEKPHADASNEHENVIASGLNSFAATRNTIEDMELQTRALTEPLPT 554

Query: 540  NQQAYKSHPLYAIEKWLTKYQVLHPKGPVLGFCSGHPVYPRTCVQTVKTRERWLREGLQV 361
            NQQAYK+H LYAIEKWLTK Q+LHPKGP+LGFCSGHPVYPR CVQT++T+ERWLREGLQV
Sbjct: 555  NQQAYKNHLLYAIEKWLTKCQILHPKGPILGFCSGHPVYPRACVQTLRTKERWLREGLQV 614

Query: 360  KPNEHPVKELQRSIKPQKGQDFEAEDYGCAADSKEDIKLYGQWQLEPLNLPHAVNGIVPK 181
            K  E P K +++S K +K Q  E +DYG   DS   ++LYG WQLEPL LPHAVNGIVPK
Sbjct: 615  KVKELPAKVVKQSGKLKKVQFSEDDDYG-ETDSGV-VELYGMWQLEPLQLPHAVNGIVPK 672

Query: 180  NDRGQVDVWSEKCLPPGTVHLRFPRAYSVAKRLEIDYAPAMVGFEFKNGRSYPVYDGIV 4
            N+RGQVDVWSEKCLPPGTVHLR PR + VAKRLEIDYAPAMVGFEF+NGRS PV+DGIV
Sbjct: 673  NERGQVDVWSEKCLPPGTVHLRLPRVFYVAKRLEIDYAPAMVGFEFRNGRSVPVFDGIV 731


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