BLASTX nr result

ID: Glycyrrhiza23_contig00025075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025075
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627695.1| E3 ubiquitin-protein ligase Arkadia [Medicag...   255   3e-66
ref|XP_003542854.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l...   245   4e-63
gb|ACU21297.1| unknown [Glycine max]                                  245   4e-63
ref|XP_003540530.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l...   244   1e-62
gb|ACU23155.1| unknown [Glycine max]                                  240   1e-61

>ref|XP_003627695.1| E3 ubiquitin-protein ligase Arkadia [Medicago truncatula]
           gi|355521717|gb|AET02171.1| E3 ubiquitin-protein ligase
           Arkadia [Medicago truncatula]
          Length = 288

 Score =  255 bits (652), Expect = 3e-66
 Identities = 122/157 (77%), Positives = 134/157 (85%), Gaps = 3/157 (1%)
 Frame = -3

Query: 464 MNDGRQMGVHYMDAG-FPYPANESFVDFFQGVSHVPVNYAFPGSMPDQDNVYWSMNMNPY 288
           MNDGRQMGVHYMD G FPY  NE+FVDFFQG++HVPVNYAFPGSMPDQ++VYWSMNM+PY
Sbjct: 1   MNDGRQMGVHYMDGGGFPYAVNENFVDFFQGINHVPVNYAFPGSMPDQESVYWSMNMSPY 60

Query: 287 KFXXXXXXXXXXXXXYEVNDHLPRMEINRAEWEYPSVVIAEEPATSDSPPRRDGVSMQTI 108
           KF             YE+ND+LPRME NR EWEYPS VI+EEPATSDSPPRRDGV+MQTI
Sbjct: 61  KFGMSGPGSTSYYNSYELNDNLPRMENNRVEWEYPSEVISEEPATSDSPPRRDGVNMQTI 120

Query: 107 PEECSPNHHESSSSQ--VVWQDDIDPDNMTYEELLDL 3
           PEECSPNH ESSSSQ  V+WQD+IDPDNMTYEELLDL
Sbjct: 121 PEECSPNHQESSSSQVEVIWQDNIDPDNMTYEELLDL 157


>ref|XP_003542854.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Glycine max]
          Length = 247

 Score =  245 bits (625), Expect = 4e-63
 Identities = 119/157 (75%), Positives = 132/157 (84%), Gaps = 3/157 (1%)
 Frame = -3

Query: 464 MNDGRQMGVHYMDAGFPYPANESFVDFFQGVSHVPVNYAFPGSMPDQDNVYWSMNMNPYK 285
           MNDGRQMGVHY+DAGFPY  N++FVDFFQG +HVPVNYAF GS+PDQ++VYWSMNMNPYK
Sbjct: 1   MNDGRQMGVHYVDAGFPYAVNDNFVDFFQGFTHVPVNYAFAGSIPDQESVYWSMNMNPYK 60

Query: 284 FXXXXXXXXXXXXXYEVNDHLPRMEINRAEWEYPS-VVIAEEPATSDSPPRRDGV-SMQT 111
           F             YEVN HLPRMEI+RAEWEYPS +   EEPAT+DSPPRRDGV SMQT
Sbjct: 61  FGLSGPGSTSYYSSYEVNGHLPRMEIDRAEWEYPSTITTVEEPATTDSPPRRDGVTSMQT 120

Query: 110 IPEECSPNHHES-SSSQVVWQDDIDPDNMTYEELLDL 3
           IPEECSPNHHES SSSQV+WQD+I PD+MTYEELLDL
Sbjct: 121 IPEECSPNHHESNSSSQVIWQDNIYPDDMTYEELLDL 157


>gb|ACU21297.1| unknown [Glycine max]
          Length = 207

 Score =  245 bits (625), Expect = 4e-63
 Identities = 119/157 (75%), Positives = 132/157 (84%), Gaps = 3/157 (1%)
 Frame = -3

Query: 464 MNDGRQMGVHYMDAGFPYPANESFVDFFQGVSHVPVNYAFPGSMPDQDNVYWSMNMNPYK 285
           MNDGRQMGVHY+DAGFPY  N++FVDFFQG +HVPVNYAF GS+PDQ++VYWSMNMNPYK
Sbjct: 1   MNDGRQMGVHYVDAGFPYAVNDNFVDFFQGFTHVPVNYAFAGSIPDQESVYWSMNMNPYK 60

Query: 284 FXXXXXXXXXXXXXYEVNDHLPRMEINRAEWEYPS-VVIAEEPATSDSPPRRDGV-SMQT 111
           F             YEVN HLPRMEI+RAEWEYPS +   EEPAT+DSPPRRDGV SMQT
Sbjct: 61  FGLSGPGSTSYYSSYEVNGHLPRMEIDRAEWEYPSTITTVEEPATTDSPPRRDGVTSMQT 120

Query: 110 IPEECSPNHHES-SSSQVVWQDDIDPDNMTYEELLDL 3
           IPEECSPNHHES SSSQV+WQD+I PD+MTYEELLDL
Sbjct: 121 IPEECSPNHHESNSSSQVIWQDNIYPDDMTYEELLDL 157


>ref|XP_003540530.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Glycine max]
          Length = 247

 Score =  244 bits (622), Expect = 1e-62
 Identities = 119/157 (75%), Positives = 132/157 (84%), Gaps = 3/157 (1%)
 Frame = -3

Query: 464 MNDGRQMGVHYMDAGFPYPANESFVDFFQGVSHVPVNYAFPGSMPDQDNVYWSMNMNPYK 285
           MNDGRQMGV+Y+DAGFPY  NE+FVDFFQG + VPVNYAF GS+PDQ++VYWSMNMNPYK
Sbjct: 1   MNDGRQMGVNYVDAGFPYAVNENFVDFFQGFTPVPVNYAFAGSIPDQESVYWSMNMNPYK 60

Query: 284 FXXXXXXXXXXXXXYEVNDHLPRMEINRAEWEYPS-VVIAEEPATSDSPPRRDGV-SMQT 111
           F             YEVN HLPRMEI+RAEWEYPS +   EEPAT+DSPPRRDGV +MQT
Sbjct: 61  FGLSGPGSTSYYSSYEVNGHLPRMEIDRAEWEYPSTITTVEEPATTDSPPRRDGVTNMQT 120

Query: 110 IPEECSPNHHES-SSSQVVWQDDIDPDNMTYEELLDL 3
           IPEECSPNHHES SSSQV+WQD+IDPDNMTYEELLDL
Sbjct: 121 IPEECSPNHHESNSSSQVIWQDNIDPDNMTYEELLDL 157


>gb|ACU23155.1| unknown [Glycine max]
          Length = 247

 Score =  240 bits (613), Expect = 1e-61
 Identities = 117/157 (74%), Positives = 131/157 (83%), Gaps = 3/157 (1%)
 Frame = -3

Query: 464 MNDGRQMGVHYMDAGFPYPANESFVDFFQGVSHVPVNYAFPGSMPDQDNVYWSMNMNPYK 285
           MNDGRQMGVHY+DAGFPY  N++FVDFFQG +HVPVNYAF GS+PDQ++VYWSMNMNPYK
Sbjct: 1   MNDGRQMGVHYVDAGFPYAVNDNFVDFFQGFTHVPVNYAFAGSIPDQESVYWSMNMNPYK 60

Query: 284 FXXXXXXXXXXXXXYEVNDHLPRMEINRAEWEYPS-VVIAEEPATSDSPPRRDGV-SMQT 111
           F             Y VN HLPRMEI+RAEWEYPS +   EEPAT+DSPPRRDGV SMQT
Sbjct: 61  FGLSGPGSTSYYSSYGVNGHLPRMEIDRAEWEYPSTITTVEEPATTDSPPRRDGVTSMQT 120

Query: 110 IPEECSPNHHES-SSSQVVWQDDIDPDNMTYEELLDL 3
           IPEECSP+HHES SSSQV+WQD+I PD+MTYEELLDL
Sbjct: 121 IPEECSPDHHESNSSSQVIWQDNIYPDDMTYEELLDL 157


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