BLASTX nr result

ID: Glycyrrhiza23_contig00025053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025053
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534243.1| PREDICTED: protein SGT1 homolog At5g65490-li...    67   1e-09
ref|XP_002866674.1| hypothetical protein ARALYDRAFT_496782 [Arab...    65   6e-09
gb|AAL87313.1| unknown protein [Arabidopsis thaliana]                  65   6e-09
ref|NP_201352.1| uncharacterized protein [Arabidopsis thaliana] ...    65   6e-09
ref|XP_002265187.2| PREDICTED: LOW QUALITY PROTEIN: protein SGT1...    64   1e-08

>ref|XP_003534243.1| PREDICTED: protein SGT1 homolog At5g65490-like [Glycine max]
          Length = 645

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = +3

Query: 57  AFHLPHWLNPDISLHRVFLCSGDIHIVPHNLLPFPSLLDSLHFLTNPP 200
           AFHLP WLNPD + HR+FL +G +HIVP N L  PSL+DSL+F+ + P
Sbjct: 132 AFHLPRWLNPDTAHHRLFLRNGSLHIVPRNRLTNPSLIDSLNFVASSP 179


>ref|XP_002866674.1| hypothetical protein ARALYDRAFT_496782 [Arabidopsis lyrata subsp.
           lyrata] gi|297312509|gb|EFH42933.1| hypothetical protein
           ARALYDRAFT_496782 [Arabidopsis lyrata subsp. lyrata]
          Length = 650

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +3

Query: 57  AFHLPHWLNPDISLHRVFLCSGDIHIVPHNLLPFPSLLDSLHFL 188
           AFHLP WLNP+ SL+RVF+  GD+HIVP + LP PSL+ SL FL
Sbjct: 135 AFHLPRWLNPETSLNRVFIRGGDLHIVPRSRLPDPSLVASLRFL 178


>gb|AAL87313.1| unknown protein [Arabidopsis thaliana]
          Length = 645

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +3

Query: 57  AFHLPHWLNPDISLHRVFLCSGDIHIVPHNLLPFPSLLDSLHFL 188
           AFHLP WLNP+ SL+RVF+  GD+HIVP + LP PSL+ SL FL
Sbjct: 131 AFHLPRWLNPETSLNRVFIRGGDLHIVPRSRLPDPSLVASLRFL 174


>ref|NP_201352.1| uncharacterized protein [Arabidopsis thaliana]
           gi|17369179|sp|Q9LSM5.1|SGT1_ARATH RecName: Full=Protein
           SGT1 homolog At5g65490 gi|8978278|dbj|BAA98169.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|332010679|gb|AED98062.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 643

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +3

Query: 57  AFHLPHWLNPDISLHRVFLCSGDIHIVPHNLLPFPSLLDSLHFL 188
           AFHLP WLNP+ SL+RVF+  GD+HIVP + LP PSL+ SL FL
Sbjct: 129 AFHLPRWLNPETSLNRVFIRGGDLHIVPRSRLPDPSLVASLRFL 172


>ref|XP_002265187.2| PREDICTED: LOW QUALITY PROTEIN: protein SGT1 homolog At5g65490-like
           [Vitis vinifera]
          Length = 604

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +3

Query: 57  AFHLPHWLNPDISLHRVFLCSGDIHIVPHNLLPFPSLLDSLHFLTN 194
           AFHLP W+NP+ S++RVF+  G++HIVP + L  PSLLDSL FL N
Sbjct: 132 AFHLPRWINPENSVNRVFIRRGELHIVPKSRLSSPSLLDSLQFLVN 177


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