BLASTX nr result

ID: Glycyrrhiza23_contig00025027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025027
         (956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF75791.1|AF271892_1 DEAD box protein P68 [Pisum sativum]         565   e-159
ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [...   533   e-149
ref|XP_002319430.1| predicted protein [Populus trichocarpa] gi|2...   531   e-148
ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putativ...   526   e-147
ref|XP_001785829.1| predicted protein [Physcomitrella patens sub...   509   e-142

>gb|AAF75791.1|AF271892_1 DEAD box protein P68 [Pisum sativum]
          Length = 622

 Score =  565 bits (1457), Expect = e-159
 Identities = 290/318 (91%), Positives = 302/318 (94%)
 Frame = -2

Query: 955  CLDPSIMKDIAYHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQ 776
            CL PSIMKDIAYHEYTRP+SIQAQAMP+ALSGRDLLGCAETGSGKTAAFTIPM+QHCL Q
Sbjct: 124  CLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMLQHCLVQ 183

Query: 775  PPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIIVGGTNIEKQRSELRTGV 596
            PPIRRGDGPLALVLAPTRELAQQIEKEV+AFSRSLES K  I+VGGTNIEKQRSELR GV
Sbjct: 184  PPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIEKQRSELRAGV 243

Query: 595  EIAVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLF 416
            EIAVATPGRFIDHLQQGNTSLSRIS+VVLDEADRMLDMGFEPQIREIMR+LPEKHQTLLF
Sbjct: 244  EIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPEKHQTLLF 303

Query: 415  SATMPEEIEALSKEYLTKPVQVKVGKVSSPTTNVSQTLVKVSESEKTDRLLDMLVEEASQ 236
            SATMP EIEAL+KEYL  PVQVKVGKVSSPTTNVSQTLVKVS SEK DRLLD+LVEEASQ
Sbjct: 304  SATMPVEIEALAKEYLANPVQVKVGKVSSPTTNVSQTLVKVSGSEKIDRLLDLLVEEASQ 363

Query: 235  SEKCGHPFPLTIVFVERKTRCDEVVEALVAQGLSAVSLHGGRSQSEREAALHDFRSGSTS 56
            +EKCGH FPLTIVFVERKTRCDEV EALVAQGLSAVSLHGG SQ+EREAAL +FRS STS
Sbjct: 364  AEKCGHRFPLTIVFVERKTRCDEVAEALVAQGLSAVSLHGGHSQNEREAALQNFRSSSTS 423

Query: 55   ILVATDVASRGLDVTGVS 2
            ILVATDVASRGLDVTGVS
Sbjct: 424  ILVATDVASRGLDVTGVS 441


>ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [Vitis vinifera]
            gi|297745752|emb|CBI15808.3| unnamed protein product
            [Vitis vinifera]
          Length = 568

 Score =  533 bits (1372), Expect = e-149
 Identities = 271/317 (85%), Positives = 292/317 (92%)
 Frame = -2

Query: 952  LDPSIMKDIAYHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQP 773
            L  SIMKDI +HEYTRPT IQAQAMPVALSGRDLLGCAETGSGKTAAF IPMIQHCLAQP
Sbjct: 130  LHQSIMKDITFHEYTRPTFIQAQAMPVALSGRDLLGCAETGSGKTAAFAIPMIQHCLAQP 189

Query: 772  PIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIIVGGTNIEKQRSELRTGVE 593
            P+RRGDGPLALVLAPTRELAQQIEKEVKAFSRSL+SF+TAI+VGGTNI +QRSELR GV 
Sbjct: 190  PVRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLDSFRTAIVVGGTNISEQRSELRAGVN 249

Query: 592  IAVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLFS 413
            I VATPGRFI HLQ+GNTSLSRISFVVLDEADRMLDMGFEPQIRE+M+NLP+KHQTLLFS
Sbjct: 250  IVVATPGRFIHHLQEGNTSLSRISFVVLDEADRMLDMGFEPQIREVMQNLPQKHQTLLFS 309

Query: 412  ATMPEEIEALSKEYLTKPVQVKVGKVSSPTTNVSQTLVKVSESEKTDRLLDMLVEEASQS 233
            ATMP EIE L++EYL  PVQVKVGKVS PT NVSQ L KVSESEK D LL +LVEEASQ+
Sbjct: 310  ATMPMEIETLAQEYLNNPVQVKVGKVSCPTANVSQILEKVSESEKIDGLLALLVEEASQA 369

Query: 232  EKCGHPFPLTIVFVERKTRCDEVVEALVAQGLSAVSLHGGRSQSEREAALHDFRSGSTSI 53
            E+CG PFPLTIVFVERKTRCDEV EALVAQGL AV+LHGGRSQ+EREAAL DFR+G+T+I
Sbjct: 370  ERCGRPFPLTIVFVERKTRCDEVAEALVAQGLRAVALHGGRSQAEREAALRDFRNGATNI 429

Query: 52   LVATDVASRGLDVTGVS 2
            LVATDVASRGLDVTGV+
Sbjct: 430  LVATDVASRGLDVTGVA 446


>ref|XP_002319430.1| predicted protein [Populus trichocarpa] gi|222857806|gb|EEE95353.1|
            predicted protein [Populus trichocarpa]
          Length = 559

 Score =  531 bits (1367), Expect = e-148
 Identities = 272/318 (85%), Positives = 291/318 (91%)
 Frame = -2

Query: 955  CLDPSIMKDIAYHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQ 776
            CL  SIMKDIA+HEYTRPTSIQAQAM VALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQ
Sbjct: 121  CLHQSIMKDIAHHEYTRPTSIQAQAMTVALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQ 180

Query: 775  PPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIIVGGTNIEKQRSELRTGV 596
            P +RRGDGPLALVLAPTRELAQQIEKEVK FSRSLESF+TAI+VGGTNI  QR ELR GV
Sbjct: 181  PTVRRGDGPLALVLAPTRELAQQIEKEVKGFSRSLESFRTAIVVGGTNIADQRLELRAGV 240

Query: 595  EIAVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLF 416
            ++ VATPGR IDHLQQGNTSLSRISF+VLDEADRMLDMGFEPQIRE+MRNLPEKHQTLLF
Sbjct: 241  DVIVATPGRLIDHLQQGNTSLSRISFIVLDEADRMLDMGFEPQIREVMRNLPEKHQTLLF 300

Query: 415  SATMPEEIEALSKEYLTKPVQVKVGKVSSPTTNVSQTLVKVSESEKTDRLLDMLVEEASQ 236
            SATMP EIE L++EYLT PVQV+VGKVSSPT NVSQ L KVSESEK D LL +LVE+ASQ
Sbjct: 301  SATMPVEIETLTQEYLTSPVQVRVGKVSSPTANVSQILTKVSESEKIDCLLALLVEDASQ 360

Query: 235  SEKCGHPFPLTIVFVERKTRCDEVVEALVAQGLSAVSLHGGRSQSEREAALHDFRSGSTS 56
            +E+   PFPLTIVFVERKTRC+EV EALVAQ L AV+LHGGRSQS+REAAL DFRSGSTS
Sbjct: 361  AERSNQPFPLTIVFVERKTRCNEVAEALVAQALQAVALHGGRSQSDREAALRDFRSGSTS 420

Query: 55   ILVATDVASRGLDVTGVS 2
            ILVATDVASRGLDVTGV+
Sbjct: 421  ILVATDVASRGLDVTGVA 438


>ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223536802|gb|EEF38442.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 564

 Score =  526 bits (1354), Expect = e-147
 Identities = 267/318 (83%), Positives = 289/318 (90%)
 Frame = -2

Query: 955  CLDPSIMKDIAYHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQ 776
            CL+ +IMKDIAYH YTRPT IQ QAM V+LSGRDLL CAETGSGKTAAFTIPMIQHCLAQ
Sbjct: 127  CLNQNIMKDIAYHGYTRPTPIQVQAMTVSLSGRDLLACAETGSGKTAAFTIPMIQHCLAQ 186

Query: 775  PPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIIVGGTNIEKQRSELRTGV 596
             PIRRGDGPLALVLAPTRELAQQIEKEVK FSRSL+SF+TAI+VGGTNI  QRSELR GV
Sbjct: 187  SPIRRGDGPLALVLAPTRELAQQIEKEVKCFSRSLDSFRTAIVVGGTNIADQRSELRAGV 246

Query: 595  EIAVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLF 416
            +I VATPGRFIDHLQQGNTSLSRISF+VLDEADRMLDMGFEPQIRE++ NLPE+HQTLLF
Sbjct: 247  DIMVATPGRFIDHLQQGNTSLSRISFIVLDEADRMLDMGFEPQIREVLHNLPERHQTLLF 306

Query: 415  SATMPEEIEALSKEYLTKPVQVKVGKVSSPTTNVSQTLVKVSESEKTDRLLDMLVEEASQ 236
            SATMPEEIE L++EYLT PVQVKVGKVS  T NVSQ L KVSESEK D LL +LVE+ASQ
Sbjct: 307  SATMPEEIETLAQEYLTTPVQVKVGKVSGLTANVSQVLKKVSESEKIDCLLGLLVEDASQ 366

Query: 235  SEKCGHPFPLTIVFVERKTRCDEVVEALVAQGLSAVSLHGGRSQSEREAALHDFRSGSTS 56
            +E+  HPFPLT+VFV+RK RCDEV EALVAQGL AV+LHGGRSQ+EREAALHDFRSGST 
Sbjct: 367  AERADHPFPLTVVFVDRKARCDEVAEALVAQGLRAVALHGGRSQNEREAALHDFRSGSTD 426

Query: 55   ILVATDVASRGLDVTGVS 2
            ILVATDVASRGLDVTGV+
Sbjct: 427  ILVATDVASRGLDVTGVT 444


>ref|XP_001785829.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162662518|gb|EDQ49361.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 538

 Score =  509 bits (1310), Expect = e-142
 Identities = 257/318 (80%), Positives = 285/318 (89%)
 Frame = -2

Query: 955  CLDPSIMKDIAYHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQ 776
            CL  SIMKD+ +H YT PT IQAQA+PVALSGRDLLGCAETGSGKTAAF++PMIQHCLAQ
Sbjct: 116  CLHLSIMKDVTFHNYTTPTPIQAQALPVALSGRDLLGCAETGSGKTAAFSLPMIQHCLAQ 175

Query: 775  PPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIIVGGTNIEKQRSELRTGV 596
            PPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRS E FKT+I+VGGTNI +QRSELR GV
Sbjct: 176  PPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSAEGFKTSIVVGGTNIYEQRSELRAGV 235

Query: 595  EIAVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLF 416
            EI VATPGRFIDHLQQGN+SLSR+S+VVLDEADRMLDMGFEPQIRE+MR+LP+KHQTLLF
Sbjct: 236  EIVVATPGRFIDHLQQGNSSLSRVSYVVLDEADRMLDMGFEPQIREVMRSLPKKHQTLLF 295

Query: 415  SATMPEEIEALSKEYLTKPVQVKVGKVSSPTTNVSQTLVKVSESEKTDRLLDMLVEEASQ 236
            SATMPEEIEAL++EYL KPV+VKVG+VSSPT NV+Q L K++E EK D LL +LV+E SQ
Sbjct: 296  SATMPEEIEALAQEYLNKPVRVKVGRVSSPTANVTQNLEKITEKEKIDSLLALLVDEHSQ 355

Query: 235  SEKCGHPFPLTIVFVERKTRCDEVVEALVAQGLSAVSLHGGRSQSEREAALHDFRSGSTS 56
            S     P PLTIVFVERK RCDEV +ALV QGL A +LHGGRSQSEREAAL DFR G+T+
Sbjct: 356  SLDSNQPPPLTIVFVERKARCDEVTDALVEQGLKATALHGGRSQSEREAALRDFRKGTTN 415

Query: 55   ILVATDVASRGLDVTGVS 2
            ILVATDVASRGLDVTGV+
Sbjct: 416  ILVATDVASRGLDVTGVA 433


Top