BLASTX nr result

ID: Glycyrrhiza23_contig00025012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025012
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532734.1| PREDICTED: uncharacterized protein LOC100820...   236   2e-60
emb|CBI21495.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268...   170   1e-40
ref|XP_002532942.1| conserved hypothetical protein [Ricinus comm...   165   3e-39
ref|NP_201300.1| Mitochondrial transcription termination factor ...   147   1e-33

>ref|XP_003532734.1| PREDICTED: uncharacterized protein LOC100820280 [Glycine max]
          Length = 1401

 Score =  236 bits (602), Expect = 2e-60
 Identities = 119/175 (68%), Positives = 142/175 (81%)
 Frame = -3

Query: 525  KKALVPSVEAIRRIVHDEKEFVQVLRKCGPILPKYRKFVDNITFLESLGIVGSQLSMLLK 346
            KK LVPSVEAI +I+  EK+FV VL +CG ILP Y+KF+DN+ FLES GIVGS L+MLLK
Sbjct: 1168 KKTLVPSVEAIGKILCSEKDFVHVLLRCGRILPNYKKFMDNVVFLESCGIVGSHLAMLLK 1227

Query: 345  RQSRLLTAQQSKVKSYALRAVDMGFHENSRMFVHALLTICGLSFKTFSRKLELIQCFGFS 166
             Q  +   +QS +  Y  RAVDMGF+ENSRM VHA+ +I  LS+KTF RKL+LI CFGFS
Sbjct: 1228 LQPGIFITRQSIIGDYVSRAVDMGFNENSRMLVHAIHSISSLSYKTFRRKLKLIICFGFS 1287

Query: 165  KDESLQMFKRSPGLLRTSEKKLKVGVEFFLHTVMLSKSVLVHRPMILMYSIEDRV 1
             +E LQMF+RSP LLRTSEKK+KVG+EFFLHTVML KSVLVH+P +LMYS+EDRV
Sbjct: 1288 NEEGLQMFRRSPTLLRTSEKKVKVGLEFFLHTVMLPKSVLVHQPRVLMYSMEDRV 1342


>emb|CBI21495.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  170 bits (431), Expect = 1e-40
 Identities = 90/179 (50%), Positives = 128/179 (71%), Gaps = 4/179 (2%)
 Frame = -3

Query: 525 KKALVPSVEAIRRIVHDEK---EFVQVLRKCGPILPKYRKFV-DNITFLESLGIVGSQLS 358
           +K LVP +E +++ + D++   + ++VLR+C  +L +  + +  NI FLES GIVGSQLS
Sbjct: 129 EKKLVPCIEILKKTLSDDENNGDLIRVLRRCTWVLSRNPELLLSNIAFLESCGIVGSQLS 188

Query: 357 MLLKRQSRLLTAQQSKVKSYALRAVDMGFHENSRMFVHALLTICGLSFKTFSRKLELIQC 178
           MLL RQ RL   +QS +K    RAVDMGF   SRM V+AL TI  L  +T  +K EL + 
Sbjct: 189 MLLTRQPRLFVIKQSTLKDLVSRAVDMGFSIESRMLVYALYTISCLRDETLRKKFELFRS 248

Query: 177 FGFSKDESLQMFKRSPGLLRTSEKKLKVGVEFFLHTVMLSKSVLVHRPMILMYSIEDRV 1
           +GF++ E ++MF+R+PGLLR SE+KLK+G+EFF++T+   K++LVHRP ILM S+EDRV
Sbjct: 249 WGFTEQECIEMFRRTPGLLRASEEKLKLGMEFFMNTMKFEKTLLVHRPTILMLSMEDRV 307


>ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268158 [Vitis vinifera]
          Length = 388

 Score =  170 bits (431), Expect = 1e-40
 Identities = 90/179 (50%), Positives = 128/179 (71%), Gaps = 4/179 (2%)
 Frame = -3

Query: 525 KKALVPSVEAIRRIVHDEK---EFVQVLRKCGPILPKYRKFV-DNITFLESLGIVGSQLS 358
           +K LVP +E +++ + D++   + ++VLR+C  +L +  + +  NI FLES GIVGSQLS
Sbjct: 148 EKKLVPCIEILKKTLSDDENNGDLIRVLRRCTWVLSRNPELLLSNIAFLESCGIVGSQLS 207

Query: 357 MLLKRQSRLLTAQQSKVKSYALRAVDMGFHENSRMFVHALLTICGLSFKTFSRKLELIQC 178
           MLL RQ RL   +QS +K    RAVDMGF   SRM V+AL TI  L  +T  +K EL + 
Sbjct: 208 MLLTRQPRLFVIKQSTLKDLVSRAVDMGFSIESRMLVYALYTISCLRDETLRKKFELFRS 267

Query: 177 FGFSKDESLQMFKRSPGLLRTSEKKLKVGVEFFLHTVMLSKSVLVHRPMILMYSIEDRV 1
           +GF++ E ++MF+R+PGLLR SE+KLK+G+EFF++T+   K++LVHRP ILM S+EDRV
Sbjct: 268 WGFTEQECIEMFRRTPGLLRASEEKLKLGMEFFMNTMKFEKTLLVHRPTILMLSMEDRV 326


>ref|XP_002532942.1| conserved hypothetical protein [Ricinus communis]
           gi|223527293|gb|EEF29446.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 366

 Score =  165 bits (418), Expect = 3e-39
 Identities = 85/179 (47%), Positives = 127/179 (70%), Gaps = 5/179 (2%)
 Frame = -3

Query: 522 KALVPSVEAIRRIV---HDEKEFVQVLRKCGPILPKYRK--FVDNITFLESLGIVGSQLS 358
           K L P VE ++R++    + K+ V+VL +C  I+ K  K   + N+ FLES GIVGSQLS
Sbjct: 123 KKLSPRVEILKRLLLNDENNKDLVKVLTRCNWIISKNPKSRLLSNVAFLESCGIVGSQLS 182

Query: 357 MLLKRQSRLLTAQQSKVKSYALRAVDMGFHENSRMFVHALLTICGLSFKTFSRKLELIQC 178
           MLL+RQ RL   Q+S ++    + ++MGF  NSRM V+AL T+  +S +TF +K+E+++ 
Sbjct: 183 MLLRRQPRLFIMQESALRDLVSQVLNMGFSVNSRMLVYALYTVSCMSHETFGKKIEILKK 242

Query: 177 FGFSKDESLQMFKRSPGLLRTSEKKLKVGVEFFLHTVMLSKSVLVHRPMILMYSIEDRV 1
           FGFS+ E  +MF++ PGLLR+SEKKLK+G++FF++T+   + VLV+RP  LM S+E+RV
Sbjct: 243 FGFSEYECTEMFRKQPGLLRSSEKKLKLGLDFFINTIKFKREVLVYRPTCLMLSMEERV 301


>ref|NP_201300.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|8843759|dbj|BAA97307.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|332010591|gb|AED97974.1| Mitochondrial transcription
           termination factor family protein [Arabidopsis thaliana]
          Length = 391

 Score =  147 bits (370), Expect = 1e-33
 Identities = 79/178 (44%), Positives = 116/178 (65%), Gaps = 4/178 (2%)
 Frame = -3

Query: 522 KALVPSVEAIRRIVHDEKEFVQV-LRKCGPILPKYRK---FVDNITFLESLGIVGSQLSM 355
           K L+P+VE ++ IV  + E + V L +CG +L         + NI++LE+ GIVGSQL+ 
Sbjct: 141 KKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLAS 200

Query: 354 LLKRQSRLLTAQQSKVKSYALRAVDMGFHENSRMFVHALLTICGLSFKTFSRKLELIQCF 175
           LL+RQ R+    + K++ Y  RA+D+GF  NSRM VHA++++  LS KTF RK++L    
Sbjct: 201 LLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMAN 260

Query: 174 GFSKDESLQMFKRSPGLLRTSEKKLKVGVEFFLHTVMLSKSVLVHRPMILMYSIEDRV 1
           GFS+DE   + +RSPGL+R SE KL +G EF+L  + L +  L  RP +L Y++E RV
Sbjct: 261 GFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRV 318


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