BLASTX nr result

ID: Glycyrrhiza23_contig00024996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024996
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-l...   166   1e-39
ref|XP_003590708.1| ATP-dependent DNA helicase pcrA [Medicago tr...   162   3e-38
ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [R...   148   4e-34
ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-l...   138   5e-31

>ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max]
          Length = 1123

 Score =  166 bits (421), Expect = 1e-39
 Identities = 78/88 (88%), Positives = 84/88 (95%)
 Frame = +2

Query: 5    RSVVSHIFHQWAKKKAFQDPKRLLDKVGFVIDERLRQKGNRNKDLLSTLKSCLCCDEANQ 184
            RS+VSH+FHQWAKKKAFQDPKRLLDKV FVIDERLRQK N+NKDLL+TLKSCL CDEA Q
Sbjct: 990  RSIVSHLFHQWAKKKAFQDPKRLLDKVSFVIDERLRQKRNKNKDLLNTLKSCLSCDEAFQ 1049

Query: 185  YAQYVLRWEQIPADKRAYLMREKQEHFM 268
            YAQYVLRWEQIPADKRA+LMREKQEHF+
Sbjct: 1050 YAQYVLRWEQIPADKRAHLMREKQEHFL 1077


>ref|XP_003590708.1| ATP-dependent DNA helicase pcrA [Medicago truncatula]
           gi|355479756|gb|AES60959.1| ATP-dependent DNA helicase
           pcrA [Medicago truncatula]
          Length = 339

 Score =  162 bits (410), Expect = 3e-38
 Identities = 77/89 (86%), Positives = 85/89 (95%)
 Frame = +2

Query: 2   ERSVVSHIFHQWAKKKAFQDPKRLLDKVGFVIDERLRQKGNRNKDLLSTLKSCLCCDEAN 181
           +RSVVSHIFH+WAKKKAFQDPKRLLDKVGFVIDERLRQK N++KDLL++LKS L CDEA 
Sbjct: 205 DRSVVSHIFHKWAKKKAFQDPKRLLDKVGFVIDERLRQKKNKHKDLLNSLKSSLSCDEAM 264

Query: 182 QYAQYVLRWEQIPADKRAYLMREKQEHFM 268
           QYAQYVLRWEQIPADKRA+LMREKQEHF+
Sbjct: 265 QYAQYVLRWEQIPADKRAHLMREKQEHFL 293


>ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [Ricinus communis]
            gi|223550147|gb|EEF51634.1| ATP-dependent DNA helicase
            pcrA, putative [Ricinus communis]
          Length = 1089

 Score =  148 bits (374), Expect = 4e-34
 Identities = 68/88 (77%), Positives = 81/88 (92%)
 Frame = +2

Query: 2    ERSVVSHIFHQWAKKKAFQDPKRLLDKVGFVIDERLRQKGNRNKDLLSTLKSCLCCDEAN 181
            +RSVVSH+FHQWAKK+AFQ+PKRLLDKVGFVIDERLR K N++KD+L  LK+CL CDEA 
Sbjct: 955  DRSVVSHLFHQWAKKQAFQNPKRLLDKVGFVIDERLRIKKNKHKDVLRALKACLSCDEAF 1014

Query: 182  QYAQYVLRWEQIPADKRAYLMREKQEHF 265
            QYA+Y LRWEQIPAD+RA++MREKQE+F
Sbjct: 1015 QYAEYALRWEQIPADERAHMMREKQEYF 1042


>ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|222832580|gb|EEE71057.1|
            predicted protein [Populus trichocarpa]
          Length = 1056

 Score =  148 bits (374), Expect = 4e-34
 Identities = 68/88 (77%), Positives = 81/88 (92%)
 Frame = +2

Query: 2    ERSVVSHIFHQWAKKKAFQDPKRLLDKVGFVIDERLRQKGNRNKDLLSTLKSCLCCDEAN 181
            ERSV+SH+FHQWAKK+AFQ+PKRLL+KVGFVIDERLR + N++KD+L  LKSCL CDEA 
Sbjct: 922  ERSVISHLFHQWAKKQAFQNPKRLLNKVGFVIDERLRVEKNKHKDVLRALKSCLSCDEAF 981

Query: 182  QYAQYVLRWEQIPADKRAYLMREKQEHF 265
            QYA+YVLRWEQIPAD+RA+L+ EKQEHF
Sbjct: 982  QYAEYVLRWEQIPADQRAHLIHEKQEHF 1009


>ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-like [Vitis vinifera]
          Length = 1113

 Score =  138 bits (347), Expect = 5e-31
 Identities = 64/89 (71%), Positives = 76/89 (85%)
 Frame = +2

Query: 2    ERSVVSHIFHQWAKKKAFQDPKRLLDKVGFVIDERLRQKGNRNKDLLSTLKSCLCCDEAN 181
            +RSVVSH+FH WAKK+AFQ+PKRLLDKVGF IDERLR   N++KD L  LKS L CDEA 
Sbjct: 979  DRSVVSHLFHHWAKKQAFQEPKRLLDKVGFAIDERLRVTKNKHKDALRELKSSLKCDEAF 1038

Query: 182  QYAQYVLRWEQIPADKRAYLMREKQEHFM 268
             YA+Y+L+WE+IPADKRA+LMR KQEHF+
Sbjct: 1039 HYAEYILKWEKIPADKRAHLMRMKQEHFL 1067


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