BLASTX nr result

ID: Glycyrrhiza23_contig00024989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024989
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE80156.1| Ribonuclease H [Medicago truncatula]                    64   2e-08
ref|XP_003619713.1| hypothetical protein MTR_6g065050 [Medicago ...    62   5e-08
ref|XP_003630994.1| hypothetical protein MTR_8g105950 [Medicago ...    61   8e-08
gb|ABD32401.2| Ribonuclease H [Medicago truncatula]                    61   8e-08
ref|XP_003590301.1| hypothetical protein MTR_1g056190 [Medicago ...    60   2e-07

>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
          Length = 438

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/81 (43%), Positives = 47/81 (58%)
 Frame = -3

Query: 454 LINEGVTQFDPLANEVQIVRHILQEFMQCSVIHTLREGNQCVDFLAKLGSATDDHLVLLQ 275
           LI     ++   A  +Q ++ +L      ++ HTLREGNQC DF AKLG+ +D HLV+ Q
Sbjct: 358 LIMNDTPRYHTYAVLIQNIKDLLS-VRNITLHHTLREGNQCADFFAKLGANSDVHLVVHQ 416

Query: 274 QPPHSMSTLLLADASGVAFTR 212
            PP  +  LL ADA G  F R
Sbjct: 417 SPPADLLPLLRADAIGTVFIR 437


>ref|XP_003619713.1| hypothetical protein MTR_6g065050 [Medicago truncatula]
           gi|355494728|gb|AES75931.1| hypothetical protein
           MTR_6g065050 [Medicago truncatula]
          Length = 80

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/78 (38%), Positives = 43/78 (55%)
 Frame = -3

Query: 445 EGVTQFDPLANEVQIVRHILQEFMQCSVIHTLREGNQCVDFLAKLGSATDDHLVLLQQPP 266
           E  T +    NEV ++R +LQ   Q  + H  REGN C D+ AK G+  +  L + + PP
Sbjct: 2   EANTLYHLYGNEVVLLRKLLQRNWQVHISHIYREGNSCADWFAKTGARNNADLTVCRNPP 61

Query: 265 HSMSTLLLADASGVAFTR 212
             +  LL+ADA+G  F R
Sbjct: 62  TDLGPLLIADANGTRFVR 79


>ref|XP_003630994.1| hypothetical protein MTR_8g105950 [Medicago truncatula]
           gi|355525016|gb|AET05470.1| hypothetical protein
           MTR_8g105950 [Medicago truncatula]
          Length = 245

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/66 (45%), Positives = 45/66 (68%)
 Frame = -3

Query: 415 NEVQIVRHILQEFMQCSVIHTLREGNQCVDFLAKLGSATDDHLVLLQQPPHSMSTLLLAD 236
           N +  ++H+L+     S+ HT REGN  VDFLAK G+ +D  LV+L + P +++++LLAD
Sbjct: 179 NLIIAIKHLLRRDWVVSLRHTFREGNVVVDFLAKEGALSDSSLVILNEAPPNITSVLLAD 238

Query: 235 ASGVAF 218
           A GV F
Sbjct: 239 AIGVEF 244


>gb|ABD32401.2| Ribonuclease H [Medicago truncatula]
          Length = 233

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/81 (41%), Positives = 47/81 (58%)
 Frame = -3

Query: 454 LINEGVTQFDPLANEVQIVRHILQEFMQCSVIHTLREGNQCVDFLAKLGSATDDHLVLLQ 275
           LI     ++   A  +Q ++ +L +    S+ HTLREGNQC DF AK G+ +D  LV+ Q
Sbjct: 153 LIANDTPRYHIYAALIQNIKDLLND-RNISLHHTLREGNQCADFFAKFGANSDAALVVHQ 211

Query: 274 QPPHSMSTLLLADASGVAFTR 212
            PP  +  LL ADA G+ F R
Sbjct: 212 SPPADLLPLLRADALGIYFVR 232


>ref|XP_003590301.1| hypothetical protein MTR_1g056190 [Medicago truncatula]
           gi|355479349|gb|AES60552.1| hypothetical protein
           MTR_1g056190 [Medicago truncatula]
          Length = 153

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/52 (51%), Positives = 34/52 (65%)
 Frame = -3

Query: 367 SVIHTLREGNQCVDFLAKLGSATDDHLVLLQQPPHSMSTLLLADASGVAFTR 212
           S+ H+LREGN CVDF+AKLG+ TD  L +   PP  + +LLL D  G  F R
Sbjct: 101 SIHHSLREGNHCVDFMAKLGATTDVDLTVYSSPPEDLLSLLLTDEMGTLFLR 152


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