BLASTX nr result

ID: Glycyrrhiza23_contig00024981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024981
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783...   234   8e-60
ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819...   234   8e-60
gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold ...   211   8e-53
gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]      207   1e-51
gb|AFN53681.1| gag protein [Linum usitatissimum]                      188   7e-46

>ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783177 [Glycine max]
          Length = 2219

 Score =  234 bits (597), Expect = 8e-60
 Identities = 111/185 (60%), Positives = 145/185 (78%), Gaps = 1/185 (0%)
 Frame = -1

Query: 593 DGRIEVPL-LTDPSYPAWERCNLLVHSWIMNSVSDSIAQSIVFLENALDVWRDLKDRFSQ 417
           DG I +P+   DPS+ AW RCN+L+HSWI+NSV  SI++SIVF++NA DVW DLK+RFSQ
Sbjct: 257 DGTIPMPVDAFDPSFRAWNRCNMLIHSWILNSVEPSISRSIVFMDNASDVWLDLKERFSQ 316

Query: 416 GDLIHISELQQEIHSLQQGSRSVTEFFTELKTLWEELEAYRPIPACACPVRCTCASMRNV 237
           GDL+ +SE+QQEI++L QG+RSVT F+++LK LWEELE Y PIP C C  RC+C +MR  
Sbjct: 317 GDLVRVSEIQQEIYALTQGTRSVTTFYSDLKALWEELEIYMPIPNCTCHHRCSCDAMRLA 376

Query: 236 RVYHQQDYVIRFLTGLNDHFSVVRSQILLMDPLPALNKVFSMVIQHERQGHYYVNDDASV 57
           R +H   +V+RFLTGLND F+ V+SQILL++PLP++ K+FSMVIQ ERQ      DD+  
Sbjct: 377 RRHHHTLHVMRFLTGLNDEFNAVKSQILLIEPLPSITKIFSMVIQFERQNCVPNLDDSKA 436

Query: 56  LVNAA 42
           LVNA+
Sbjct: 437 LVNAS 441


>ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819074 [Glycine max]
          Length = 1750

 Score =  234 bits (597), Expect = 8e-60
 Identities = 111/185 (60%), Positives = 145/185 (78%), Gaps = 1/185 (0%)
 Frame = -1

Query: 593 DGRIEVPL-LTDPSYPAWERCNLLVHSWIMNSVSDSIAQSIVFLENALDVWRDLKDRFSQ 417
           DG I +P+   DPS+ AW RCN+L+HSWI+NSV  SI++SIVF++NA DVW DLK+RFSQ
Sbjct: 64  DGTIPMPVDAFDPSFRAWNRCNMLIHSWILNSVEPSISRSIVFMDNASDVWLDLKERFSQ 123

Query: 416 GDLIHISELQQEIHSLQQGSRSVTEFFTELKTLWEELEAYRPIPACACPVRCTCASMRNV 237
           GDL+ +SE+QQEI++L QG+RSVT F+++LK LWEELE Y PIP C C  RC+C +MR  
Sbjct: 124 GDLVRVSEIQQEIYALTQGTRSVTTFYSDLKALWEELEIYMPIPNCTCHHRCSCDAMRLA 183

Query: 236 RVYHQQDYVIRFLTGLNDHFSVVRSQILLMDPLPALNKVFSMVIQHERQGHYYVNDDASV 57
           R +H   +V+RFLTGLND F+ V+SQILL++PLP++ K+FSMVIQ ERQ      DD+  
Sbjct: 184 RRHHHTLHVMRFLTGLNDEFNAVKSQILLIEPLPSITKIFSMVIQFERQNCVPNLDDSKA 243

Query: 56  LVNAA 42
           LVNA+
Sbjct: 244 LVNAS 248


>gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 772

 Score =  211 bits (537), Expect = 8e-53
 Identities = 100/189 (52%), Positives = 140/189 (74%), Gaps = 4/189 (2%)
 Frame = -1

Query: 593 DGRIEVPLLTDPSYPAWERCNLLVHSWIMNSVSDSIAQSIVFLENALDVWRDLKDRFSQG 414
           DG + +P + D +  AWERCN L+ SWI+NSVS  IAQ+IVF E A+DVW +L++RFS+ 
Sbjct: 62  DGSVPIPPMDDLNRTAWERCNNLILSWIINSVSPQIAQTIVFHEYAIDVWIELQERFSKV 121

Query: 413 DLIHISELQQEIHSLQQGSRSVTEFFTELKTLWEELEAYRPIPACACPVRCTCASMRNVR 234
           D I ++ L+  I++L+QG +SV ++FT +K+LWEEL ++RP+P C CP  C C SMR  R
Sbjct: 122 DRIRVASLRSSINNLKQGDKSVLDYFTSIKSLWEELNSHRPMPMCTCPYPCRCESMRAAR 181

Query: 233 VYHQQDYVIRFLTGLNDHFSVVRSQILLMDPLPALNKVFSMVIQHERQ----GHYYVNDD 66
            +  +D VI+FLTGLND FSVV++Q+LL+DPLP++NKV+SMVIQ E           N+D
Sbjct: 182 DFRMEDQVIQFLTGLNDSFSVVKTQVLLIDPLPSINKVYSMVIQEESNIIPPTSLASNED 241

Query: 65  ASVLVNAAD 39
           +S+LVNA+D
Sbjct: 242 SSILVNASD 250


>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
          Length = 1157

 Score =  207 bits (526), Expect = 1e-51
 Identities = 98/189 (51%), Positives = 139/189 (73%), Gaps = 4/189 (2%)
 Frame = -1

Query: 593 DGRIEVPLLTDPSYPAWERCNLLVHSWIMNSVSDSIAQSIVFLENALDVWRDLKDRFSQG 414
           DG I VP + D +  AWERCN L+HSWI+NSV++SIAQ+IVF + AL  W DLK+ FS+ 
Sbjct: 58  DGSISVPDIDDLNRQAWERCNHLIHSWIVNSVTESIAQTIVFHDTALSAWDDLKECFSKV 117

Query: 413 DLIHISELQQEIHSLQQGSRSVTEFFTELKTLWEELEAYRPIPACACPVRCTCASMRNVR 234
           D + +  L+  I++L+QG++SV ++F EL TLW+EL ++RPIP C C   C C S+R  +
Sbjct: 118 DRVRVLSLRSTINNLKQGTKSVLDYFIELCTLWDELNSHRPIPNCTCIHPCRCESIRLAK 177

Query: 233 VYHQQDYVIRFLTGLNDHFSVVRSQILLMDPLPALNKVFSMVIQHERQGHYY----VNDD 66
            Y  +D +++FLTGLND FSVV++QILLMDPLP +NKV+S+V+Q E Q   +    ++DD
Sbjct: 178 YYRTEDQILQFLTGLNDTFSVVKTQILLMDPLPPINKVYSLVVQEESQNIVFSTPSISDD 237

Query: 65  ASVLVNAAD 39
           +S+ VNA+D
Sbjct: 238 SSISVNASD 246


>gb|AFN53681.1| gag protein [Linum usitatissimum]
          Length = 375

 Score =  188 bits (477), Expect = 7e-46
 Identities = 91/167 (54%), Positives = 122/167 (73%)
 Frame = -1

Query: 593 DGRIEVPLLTDPSYPAWERCNLLVHSWIMNSVSDSIAQSIVFLENALDVWRDLKDRFSQG 414
           DG IE P    P YP W R N LV SWI+ SVS  IA+SI++ ++A   W  L+ RFSQG
Sbjct: 83  DGTIEAPDAGQPLYPYWIRNNKLVLSWILRSVSPIIAKSILYSKSARSAWVVLRSRFSQG 142

Query: 413 DLIHISELQQEIHSLQQGSRSVTEFFTELKTLWEELEAYRPIPACACPVRCTCASMRNVR 234
           D   I++LQ+++ +L+QG+RSVTEFFTEL TL++EL  +RP+P CACP  CTC  +  +R
Sbjct: 143 DAFKIADLQEKVFALKQGTRSVTEFFTELITLYDELSNFRPLPDCACPPPCTCI-LSKIR 201

Query: 233 VYHQQDYVIRFLTGLNDHFSVVRSQILLMDPLPALNKVFSMVIQHER 93
            YH QD VIRFL GL D F+  RSQ++L+DPLP+L++VF+M++Q ER
Sbjct: 202 TYHDQDRVIRFLRGLTDGFAGARSQVMLLDPLPSLDRVFAMMVQQER 248


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