BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024918
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_084809.1| photosystem I assembly protein Ycf4 [Lotus japo...   204   9e-51
ref|XP_003606016.1| Apocytochrome F [Medicago truncatula] gi|355...   199   3e-49
ref|XP_003605600.1| Photosystem I assembly protein ycf4 [Medicag...   199   3e-49
gb|ADE42521.1| photosystem I assembly protein Ycf4 [Vicia faba]       183   2e-44
gb|AEJ10263.1| photosystem I assembly protein ycf4 [Ravenea hild...   149   3e-34

>ref|NP_084809.1| photosystem I assembly protein Ycf4 [Lotus japonicus]
           gi|18202723|sp|Q9BBR9.1|YCF4_LOTJA RecName:
           Full=Photosystem I assembly protein Ycf4
           gi|13358990|dbj|BAB33207.1| hypothetical protein [Lotus
           japonicus]
          Length = 200

 Score =  204 bits (519), Expect = 9e-51
 Identities = 102/181 (56%), Positives = 117/181 (64%), Gaps = 1/181 (0%)
 Frame = +2

Query: 50  MTWESEHVWRSEDAWIDIVTGSRKPSDFFWAXXXXXXXXXXXXXXXXXYYGRNLLSFISS 229
           MTW SE  W+SE+  +D VTG R P DFFWA                 Y  +N LSFISS
Sbjct: 1   MTWISEDTWQSEEVRVDFVTGCRNPRDFFWAFITLLGSVGFLLVAASSYLHKNFLSFISS 60

Query: 230 EFEPELVPFLPQGATMTFYGTAGXXXXXXXXXXIFWNVGSGYDFFDKKNKMVCFFRYGFP 409
           EF+ EL+ FLPQGAT+T YGTAG          IFWNVGSGYD FDKK  +VC FRYGFP
Sbjct: 61  EFDSELIRFLPQGATITVYGTAGLFVSLFLWLTIFWNVGSGYDLFDKKRGIVCIFRYGFP 120

Query: 410 GKNRRIFIRVRMDDXXXXXXXXXXETKKDSRY-RNGVLYMQTREQGAIPLTPIDDYYRTP 586
           GKNRRIFIRV ++D          E KK+ RY R+GVLYMQTREQGAIPLT +DD +  P
Sbjct: 121 GKNRRIFIRVLINDIQSLIIQSKKENKKEGRYLRSGVLYMQTREQGAIPLTAVDDSWNPP 180

Query: 587 R 589
           +
Sbjct: 181 K 181


>ref|XP_003606016.1| Apocytochrome F [Medicago truncatula] gi|355507071|gb|AES88213.1|
           Apocytochrome F [Medicago truncatula]
          Length = 751

 Score =  199 bits (506), Expect = 3e-49
 Identities = 105/184 (57%), Positives = 119/184 (64%), Gaps = 2/184 (1%)
 Frame = +2

Query: 50  MTWESE-HVWRSEDAWIDIVTGSRKPSDFFWAXXXXXXXXXXXXXXXXXYYGRNLLSFIS 226
           ++W SE H  RS+DAW+DIV GSRKP +FFWA                 YYGR+  S IS
Sbjct: 27  ISWGSEKHGCRSQDAWLDIVPGSRKPINFFWASFTLLGSLGVLYLSVSSYYGRHFFSLIS 86

Query: 227 SEFEPELVPFLPQGATMTFYGTAGXXXXXXXXXXIFWNVGSGYDFFDKKNKMVCFFRYGF 406
           SEF   +VPFLPQG T+TFYG AG          IFWNVGSGY+FFDKK +MVCFFRYGF
Sbjct: 87  SEF---VVPFLPQGVTLTFYGIAGLFLSLHWWLLIFWNVGSGYNFFDKKKRMVCFFRYGF 143

Query: 407 PGKNRRIFIRVRMDDXXXXXXXXXXETKKDSRYRNGVLYMQTREQGAIPLTPIDDYY-RT 583
           PG  RRIF+RVRM+D            +  S    GVLYMQTREQG IPLTP+DDYY RT
Sbjct: 144 PGTYRRIFLRVRMEDIQSLILQANPNPEPSS----GVLYMQTREQGTIPLTPVDDYYDRT 199

Query: 584 PRKV 595
           PR V
Sbjct: 200 PRNV 203


>ref|XP_003605600.1| Photosystem I assembly protein ycf4 [Medicago truncatula]
           gi|355506655|gb|AES87797.1| Photosystem I assembly
           protein ycf4 [Medicago truncatula]
          Length = 224

 Score =  199 bits (506), Expect = 3e-49
 Identities = 105/184 (57%), Positives = 119/184 (64%), Gaps = 2/184 (1%)
 Frame = +2

Query: 50  MTWESE-HVWRSEDAWIDIVTGSRKPSDFFWAXXXXXXXXXXXXXXXXXYYGRNLLSFIS 226
           ++W SE H  RS+DAW+DIV GSRKP +FFWA                 YYGR+  S IS
Sbjct: 27  ISWGSEKHGCRSQDAWLDIVPGSRKPINFFWASFTLLGSLGVLYLSVSSYYGRHFFSLIS 86

Query: 227 SEFEPELVPFLPQGATMTFYGTAGXXXXXXXXXXIFWNVGSGYDFFDKKNKMVCFFRYGF 406
           SEF   +VPFLPQG T+TFYG AG          IFWNVGSGY+FFDKK +MVCFFRYGF
Sbjct: 87  SEF---VVPFLPQGVTLTFYGIAGLFLSLHWWLLIFWNVGSGYNFFDKKKRMVCFFRYGF 143

Query: 407 PGKNRRIFIRVRMDDXXXXXXXXXXETKKDSRYRNGVLYMQTREQGAIPLTPIDDYY-RT 583
           PG  RRIF+RVRM+D            +  S    GVLYMQTREQG IPLTP+DDYY RT
Sbjct: 144 PGTYRRIFLRVRMEDIQSLILQANPNPEPSS----GVLYMQTREQGTIPLTPVDDYYDRT 199

Query: 584 PRKV 595
           PR V
Sbjct: 200 PRNV 203


>gb|ADE42521.1| photosystem I assembly protein Ycf4 [Vicia faba]
          Length = 219

 Score =  183 bits (465), Expect = 2e-44
 Identities = 99/183 (54%), Positives = 115/183 (62%), Gaps = 1/183 (0%)
 Frame = +2

Query: 50  MTWESEHVW-RSEDAWIDIVTGSRKPSDFFWAXXXXXXXXXXXXXXXXXYYGRNLLSFIS 226
           ++W SE +  RS+DAW+DIV GSRK  + FWA                 YYGR+  SFIS
Sbjct: 27  ISWGSEKLGCRSQDAWLDIVPGSRKIINLFWASFTLLGSLGVLYISVSSYYGRDFFSFIS 86

Query: 227 SEFEPELVPFLPQGATMTFYGTAGXXXXXXXXXXIFWNVGSGYDFFDKKNKMVCFFRYGF 406
           SEF   ++PFL QG T+TFYG AG          IFWNVGSGY+FFDKKN+MVCFFRYGF
Sbjct: 87  SEF---VIPFLTQGVTLTFYGIAGLFLSLHWWLLIFWNVGSGYNFFDKKNRMVCFFRYGF 143

Query: 407 PGKNRRIFIRVRMDDXXXXXXXXXXETKKDSRYRNGVLYMQTREQGAIPLTPIDDYYRTP 586
           PG  RRIF+RVRM+D          E        +GVLYMQTREQG IPLTP+DD  RTP
Sbjct: 144 PGTYRRIFLRVRMEDIQSLILQANPEPS------SGVLYMQTREQGTIPLTPVDD--RTP 195

Query: 587 RKV 595
             V
Sbjct: 196 CNV 198


>gb|AEJ10263.1| photosystem I assembly protein ycf4 [Ravenea hildebrandtii]
          Length = 183

 Score =  149 bits (377), Expect = 3e-34
 Identities = 80/174 (45%), Positives = 99/174 (56%)
 Frame = +2

Query: 74  WRSEDAWIDIVTGSRKPSDFFWAXXXXXXXXXXXXXXXXXYYGRNLLSFISSEFEPELVP 253
           WRSE  WI+++ GSRK S+FFWA                 Y GRNL+S     F  + + 
Sbjct: 3   WRSEHIWIELIMGSRKTSNFFWACILFLGSLGFLVVGTSSYLGRNLISV----FPSQQII 58

Query: 254 FLPQGATMTFYGTAGXXXXXXXXXXIFWNVGSGYDFFDKKNKMVCFFRYGFPGKNRRIFI 433
           F PQG  M+FYG AG          I WNVGSGYD FD+K  +VC FR+GFPGKNRRIF+
Sbjct: 59  FFPQGIVMSFYGIAGLFISSYLWCTISWNVGSGYDRFDRKEGIVCIFRWGFPGKNRRIFL 118

Query: 434 RVRMDDXXXXXXXXXXETKKDSRYRNGVLYMQTREQGAIPLTPIDDYYRTPRKV 595
           R+ M D             K+  Y   VLYM+ R QGAIPLT  D+Y+ TPR++
Sbjct: 119 RLLMRDIQSIRMEV-----KEGLYPRRVLYMEIRGQGAIPLTRTDEYF-TPREI 166