BLASTX nr result

ID: Glycyrrhiza23_contig00024910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024910
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554187.1| PREDICTED: exo-poly-alpha-D-galacturonosidas...   133   2e-29
ref|XP_003625193.1| Polygalacturonase [Medicago truncatula] gi|3...   117   1e-24
gb|ABN08146.1| Virulence factor, pectin lyase fold [Medicago tru...   117   1e-24
ref|XP_002526753.1| pentatricopeptide repeat-containing protein,...    97   1e-18
ref|XP_004161486.1| PREDICTED: exo-poly-alpha-D-galacturonosidas...    96   2e-18

>ref|XP_003554187.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Glycine max]
          Length = 466

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/71 (85%), Positives = 65/71 (91%)
 Frame = +1

Query: 1   DGVRYDTAPIQSAIDSCPSGCPCQVTFPAPGKYLTATVFLKSGVVLNVEAGATILGGARL 180
           DG+RYDT  IQSAI+SCP G PC VTFPAPGKYLTATVFLKSGVVLNVE+GATILGG RL
Sbjct: 42  DGLRYDTEAIQSAINSCPEGDPCHVTFPAPGKYLTATVFLKSGVVLNVESGATILGGTRL 101

Query: 181 EDYPKESWRWY 213
           EDYP+ESWRWY
Sbjct: 102 EDYPEESWRWY 112


>ref|XP_003625193.1| Polygalacturonase [Medicago truncatula] gi|355500208|gb|AES81411.1|
           Polygalacturonase [Medicago truncatula]
          Length = 482

 Score =  117 bits (293), Expect = 1e-24
 Identities = 52/71 (73%), Positives = 60/71 (84%)
 Frame = +1

Query: 1   DGVRYDTAPIQSAIDSCPSGCPCQVTFPAPGKYLTATVFLKSGVVLNVEAGATILGGARL 180
           DG+ YDT  IQ+AIDSCP   PC++TFP+PG YLTAT+FL+SGVVLNVE GATILGG R 
Sbjct: 58  DGIHYDTVSIQTAIDSCPYSIPCRITFPSPGNYLTATIFLRSGVVLNVEPGATILGGPRQ 117

Query: 181 EDYPKESWRWY 213
           +DYPKES RWY
Sbjct: 118 KDYPKESSRWY 128


>gb|ABN08146.1| Virulence factor, pectin lyase fold [Medicago truncatula]
          Length = 205

 Score =  117 bits (293), Expect = 1e-24
 Identities = 52/71 (73%), Positives = 60/71 (84%)
 Frame = +1

Query: 1   DGVRYDTAPIQSAIDSCPSGCPCQVTFPAPGKYLTATVFLKSGVVLNVEAGATILGGARL 180
           DG+ YDT  IQ+AIDSCP   PC++TFP+PG YLTAT+FL+SGVVLNVE GATILGG R 
Sbjct: 58  DGIHYDTVSIQTAIDSCPYSIPCRITFPSPGNYLTATIFLRSGVVLNVEPGATILGGPRQ 117

Query: 181 EDYPKESWRWY 213
           +DYPKES RWY
Sbjct: 118 KDYPKESSRWY 128


>ref|XP_002526753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533942|gb|EEF35667.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 818

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/71 (64%), Positives = 53/71 (74%)
 Frame = +1

Query: 1   DGVRYDTAPIQSAIDSCPSGCPCQVTFPAPGKYLTATVFLKSGVVLNVEAGATILGGARL 180
           +G  YDT PIQS ID+CP    C V FP PGKYLTAT+ LKS VVL ++ GAT+LGG R+
Sbjct: 51  NGHDYDTVPIQSTIDACPPTTTCHVKFP-PGKYLTATIHLKSKVVLEIQKGATLLGGTRM 109

Query: 181 EDYPKESWRWY 213
           EDYPKE  RWY
Sbjct: 110 EDYPKEFSRWY 120


>ref|XP_004161486.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Cucumis
           sativus]
          Length = 463

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/71 (60%), Positives = 57/71 (80%)
 Frame = +1

Query: 1   DGVRYDTAPIQSAIDSCPSGCPCQVTFPAPGKYLTATVFLKSGVVLNVEAGATILGGARL 180
           DG+ YDT  IQSAI+SCP+   C VTFP PG YLTAT++L+SGVVL+++ GAT+L G ++
Sbjct: 44  DGLHYDTTAIQSAINSCPAPSRCYVTFP-PGTYLTATIWLRSGVVLDIQPGATVLAGTKM 102

Query: 181 EDYPKESWRWY 213
           EDYP +S RW+
Sbjct: 103 EDYPADSSRWF 113


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