BLASTX nr result

ID: Glycyrrhiza23_contig00024878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024878
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518477.1| ATP synthase gamma chain 2, chloroplast, put...    61   2e-07
gb|ADN34052.1| ATP synthase [Cucumis melo subsp. melo]                 60   3e-07
ref|XP_004145113.1| PREDICTED: ATP synthase gamma chain, chlorop...    59   6e-07
ref|XP_002305572.1| predicted protein [Populus trichocarpa] gi|1...    59   8e-07
ref|XP_002874807.1| hypothetical protein ARALYDRAFT_911722 [Arab...    57   2e-06

>ref|XP_002518477.1| ATP synthase gamma chain 2, chloroplast, putative [Ricinus
           communis] gi|223542322|gb|EEF43864.1| ATP synthase gamma
           chain 2, chloroplast, putative [Ricinus communis]
          Length = 376

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 38/96 (39%), Positives = 55/96 (57%)
 Frame = +2

Query: 281 NKYAKSGSLSNVHHLFAEIPHNTCLDLVWNTQIFSVAVELVIAANVRRDLEVVANSKPFS 460
           N  ++S S + +H    ++   T +D V NTQ  + A++LV AA VRR  E V N +PFS
Sbjct: 41  NSPSRSSSATPIHCNLRDL--RTRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFS 98

Query: 461 VALVEVFYNINKQLPMDHLGKLKCAHLEKNECMRKI 568
             LVEV YNIN+QL  + +       L KN  ++K+
Sbjct: 99  ETLVEVLYNINEQLQTEDID----VPLTKNRPVKKV 130


>gb|ADN34052.1| ATP synthase [Cucumis melo subsp. melo]
          Length = 373

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 36/71 (50%), Positives = 46/71 (64%)
 Frame = +2

Query: 290 AKSGSLSNVHHLFAEIPHNTCLDLVWNTQIFSVAVELVIAANVRRDLEVVANSKPFSVAL 469
           A+S S+S +H    E+     +D V NTQ  + A++LV AA VRR  E V N +PFS AL
Sbjct: 41  ARSWSVSPIHCGLRELRDR--IDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEAL 98

Query: 470 VEVFYNINKQL 502
           VEV YNIN+QL
Sbjct: 99  VEVLYNINEQL 109


>ref|XP_004145113.1| PREDICTED: ATP synthase gamma chain, chloroplastic-like [Cucumis
           sativus] gi|449474626|ref|XP_004154236.1| PREDICTED: ATP
           synthase gamma chain, chloroplastic-like [Cucumis
           sativus] gi|449488358|ref|XP_004158011.1| PREDICTED: ATP
           synthase gamma chain, chloroplastic-like [Cucumis
           sativus]
          Length = 373

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 35/71 (49%), Positives = 46/71 (64%)
 Frame = +2

Query: 290 AKSGSLSNVHHLFAEIPHNTCLDLVWNTQIFSVAVELVIAANVRRDLEVVANSKPFSVAL 469
           A+S S++ +H    E+     +D V NTQ  + A++LV AA VRR  E V N +PFS AL
Sbjct: 41  ARSWSVTPIHCGLRELRDR--IDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEAL 98

Query: 470 VEVFYNINKQL 502
           VEV YNIN+QL
Sbjct: 99  VEVLYNINEQL 109


>ref|XP_002305572.1| predicted protein [Populus trichocarpa] gi|118489494|gb|ABK96549.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222848536|gb|EEE86083.1| predicted protein [Populus
           trichocarpa]
          Length = 375

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 35/77 (45%), Positives = 47/77 (61%)
 Frame = +2

Query: 281 NKYAKSGSLSNVHHLFAEIPHNTCLDLVWNTQIFSVAVELVIAANVRRDLEVVANSKPFS 460
           N  ++S S++ +H    E+   T +  V NTQ  + A++LV AA VRR  E V N +PFS
Sbjct: 40  NNPSRSTSVTPIHCGLREL--RTRIQSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFS 97

Query: 461 VALVEVFYNINKQLPMD 511
             LVEV YNIN+QL  D
Sbjct: 98  ETLVEVLYNINEQLQTD 114


>ref|XP_002874807.1| hypothetical protein ARALYDRAFT_911722 [Arabidopsis lyrata subsp.
           lyrata] gi|297320644|gb|EFH51066.1| hypothetical protein
           ARALYDRAFT_911722 [Arabidopsis lyrata subsp. lyrata]
          Length = 377

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/74 (45%), Positives = 45/74 (60%)
 Frame = +2

Query: 290 AKSGSLSNVHHLFAEIPHNTCLDLVWNTQIFSVAVELVIAANVRRDLEVVANSKPFSVAL 469
           ++S S+S +     E+     +D V NTQ  + A++LV AA VRR  E V N +PFS  L
Sbjct: 45  SRSSSVSPLQASLRELRDR--IDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETL 102

Query: 470 VEVFYNINKQLPMD 511
           VEV YNIN+QL  D
Sbjct: 103 VEVLYNINEQLQTD 116


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