BLASTX nr result

ID: Glycyrrhiza23_contig00024872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024872
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42005.1| unknown [Medicago truncatula]                          265   4e-69
ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|2...   264   6e-69
ref|XP_003519998.1| PREDICTED: cleavage and polyadenylation spec...   262   2e-68
ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   262   2e-68
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   261   5e-68

>gb|AFK42005.1| unknown [Medicago truncatula]
          Length = 534

 Score =  265 bits (676), Expect = 4e-69
 Identities = 127/139 (91%), Positives = 134/139 (96%)
 Frame = +1

Query: 1   LLITESTYATTIRDSKYAREREFLKAVHKCVSGGGKVLIPTFALGRAQELCILLDDYWER 180
           LLITESTYATTIRDSKYAREREFLKAVHKCVSGGGKVLIPTFALGRAQEL ILLDDYWER
Sbjct: 198 LLITESTYATTIRDSKYAREREFLKAVHKCVSGGGKVLIPTFALGRAQELRILLDDYWER 257

Query: 181 MNLKVPIYFSAGLTVQANMYYKMLIKWTSQKIKDTYSTHNAFDFKNVHNFEKSMIDSPGP 360
           MNLKVPIYFS+GLT+QAN Y+KMLI WTSQKIKDTYSTHNAFDFKNVH FE+SM+D+PGP
Sbjct: 258 MNLKVPIYFSSGLTIQANTYHKMLIGWTSQKIKDTYSTHNAFDFKNVHKFERSMLDAPGP 317

Query: 361 CVLFATPGMISGGFSLEVF 417
           CVLFATPGM+ GGFSLEVF
Sbjct: 318 CVLFATPGMLIGGFSLEVF 336


>ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|222863821|gb|EEF00952.1|
           predicted protein [Populus trichocarpa]
          Length = 639

 Score =  264 bits (674), Expect = 6e-69
 Identities = 123/139 (88%), Positives = 137/139 (98%)
 Frame = +1

Query: 1   LLITESTYATTIRDSKYAREREFLKAVHKCVSGGGKVLIPTFALGRAQELCILLDDYWER 180
           LLITESTYATTIRDSKYAREREFLKAVH+CV+GGGKVLIPTFALGRAQELCILLDDYWER
Sbjct: 198 LLITESTYATTIRDSKYAREREFLKAVHECVAGGGKVLIPTFALGRAQELCILLDDYWER 257

Query: 181 MNLKVPIYFSAGLTVQANMYYKMLIKWTSQKIKDTYSTHNAFDFKNVHNFEKSMIDSPGP 360
           MNLKVPIYFSAGLT+QAN+YYK+LI WTSQK+K+TY+T NAFDFK+VHNF++S+I++PGP
Sbjct: 258 MNLKVPIYFSAGLTIQANLYYKILISWTSQKVKETYATRNAFDFKHVHNFDRSLINAPGP 317

Query: 361 CVLFATPGMISGGFSLEVF 417
           CVLFATPGMISGGFSLEVF
Sbjct: 318 CVLFATPGMISGGFSLEVF 336


>ref|XP_003519998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II-like [Glycine max]
          Length = 516

 Score =  262 bits (670), Expect = 2e-68
 Identities = 125/139 (89%), Positives = 133/139 (95%)
 Frame = +1

Query: 1   LLITESTYATTIRDSKYAREREFLKAVHKCVSGGGKVLIPTFALGRAQELCILLDDYWER 180
           LLITESTYATTIRDS+YAREREFLKAVHKCVS GGKVLIPTFALGRAQELCILL+DYWER
Sbjct: 198 LLITESTYATTIRDSRYAREREFLKAVHKCVSCGGKVLIPTFALGRAQELCILLEDYWER 257

Query: 181 MNLKVPIYFSAGLTVQANMYYKMLIKWTSQKIKDTYSTHNAFDFKNVHNFEKSMIDSPGP 360
           MNLKVPIYFSAGLT+QAN YYKMLI+WT QKIKDTYS HNAFDFKNV  FE+SMID+PGP
Sbjct: 258 MNLKVPIYFSAGLTIQANAYYKMLIRWTRQKIKDTYSKHNAFDFKNVQKFERSMIDAPGP 317

Query: 361 CVLFATPGMISGGFSLEVF 417
           CVLFATPGM+SGGFS+EVF
Sbjct: 318 CVLFATPGMLSGGFSVEVF 336


>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
           communis] gi|223534732|gb|EEF36424.1| cleavage and
           polyadenylation specificity factor, putative [Ricinus
           communis]
          Length = 963

 Score =  262 bits (670), Expect = 2e-68
 Identities = 123/139 (88%), Positives = 135/139 (97%)
 Frame = +1

Query: 1   LLITESTYATTIRDSKYAREREFLKAVHKCVSGGGKVLIPTFALGRAQELCILLDDYWER 180
           LLITESTYATTIRDSKYAREREFLK VHKCV+GGGKVLIPTFALGRAQELC+LLDDYWER
Sbjct: 198 LLITESTYATTIRDSKYAREREFLKVVHKCVAGGGKVLIPTFALGRAQELCLLLDDYWER 257

Query: 181 MNLKVPIYFSAGLTVQANMYYKMLIKWTSQKIKDTYSTHNAFDFKNVHNFEKSMIDSPGP 360
           MNLKVPIYFSAGLT+QANMYYKMLI WTSQKIK+TY++ NAFDFKNV+ F++S++D+PGP
Sbjct: 258 MNLKVPIYFSAGLTIQANMYYKMLIGWTSQKIKETYTSRNAFDFKNVYTFDRSLLDAPGP 317

Query: 361 CVLFATPGMISGGFSLEVF 417
           CVLFATPGMISGGFSLEVF
Sbjct: 318 CVLFATPGMISGGFSLEVF 336


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  261 bits (666), Expect = 5e-68
 Identities = 121/139 (87%), Positives = 136/139 (97%)
 Frame = +1

Query: 1    LLITESTYATTIRDSKYAREREFLKAVHKCVSGGGKVLIPTFALGRAQELCILLDDYWER 180
            LLITESTYATT+RDSKYAREREFLKAVHKCV+ GGKVLIPTFALGRAQELCILLD+YWER
Sbjct: 1447 LLITESTYATTVRDSKYAREREFLKAVHKCVADGGKVLIPTFALGRAQELCILLDNYWER 1506

Query: 181  MNLKVPIYFSAGLTVQANMYYKMLIKWTSQKIKDTYSTHNAFDFKNVHNFEKSMIDSPGP 360
            MNLKVPIYFSAGLT+QANMYYKMLI WT+Q++K+TY+THNAFDFKNV +F++S+I++PGP
Sbjct: 1507 MNLKVPIYFSAGLTIQANMYYKMLISWTNQRVKETYATHNAFDFKNVRSFDRSLINAPGP 1566

Query: 361  CVLFATPGMISGGFSLEVF 417
            CVLFATPGMISGGFSLEVF
Sbjct: 1567 CVLFATPGMISGGFSLEVF 1585


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