BLASTX nr result

ID: Glycyrrhiza23_contig00024864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024864
         (1315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544820.1| PREDICTED: ribonuclease 3-like protein 2-lik...   426   e-117
ref|XP_002529460.1| ribonuclease III, putative [Ricinus communis...   409   e-111
ref|XP_003602658.1| Endoribonuclease Dicer-like protein [Medicag...   402   e-109
gb|AFK35665.1| unknown [Medicago truncatula]                          399   e-109
ref|XP_002278706.1| PREDICTED: ribonuclease 3-like protein 2-lik...   395   e-107

>ref|XP_003544820.1| PREDICTED: ribonuclease 3-like protein 2-like [Glycine max]
          Length = 345

 Score =  426 bits (1094), Expect = e-117
 Identities = 226/344 (65%), Positives = 264/344 (76%), Gaps = 6/344 (1%)
 Frame = +3

Query: 300  MEASVLVAVEEIIGYTFRNTKLLEDALTHCSVVDAVSYERLEFLGDVVLGLAISNHLFMA 479
            ME S+L  VE I+ Y FRN KLLE+ALTH S +D VSYERLEF+GD VL LAISN+LF+A
Sbjct: 1    MEVSLLEEVENILRYRFRNKKLLEEALTHSSFLDGVSYERLEFVGDPVLSLAISNYLFLA 60

Query: 480  HPSLDPGQLSLLRAANVSTEKLARVAVRHGLHRFVRHSSPPLVDKVTEFVDAVAEEHDIV 659
            +P LDPGQLS LRAANVSTEKLARVAVR GLHRFVRHS+PPLVDKV  FVDAV  E + V
Sbjct: 61   YPDLDPGQLSALRAANVSTEKLARVAVRIGLHRFVRHSAPPLVDKVERFVDAVKLEINPV 120

Query: 660  VYGGLVKAPKILADIVESVAAAVYVDVGFDLQKLWVIIRHLLEPIVTLGDLEQQPQPVTM 839
             +GG VKAPK+LAD+VESVAAA+YVDV FDLQ LWVI+R +LEPIVT   LE+QPQPVTM
Sbjct: 121  AHGGSVKAPKVLADVVESVAAAIYVDVNFDLQTLWVIMRGVLEPIVTPDALEKQPQPVTM 180

Query: 840  LFEICQKNGKEVDIKHRRNGDKSIASVYVDGHLVASASSDQKDIAR------XXXXXXXX 1001
            L+E+CQK GK+VDIK  R GD S+A V+VDG  VASASS QKD A+              
Sbjct: 181  LYEMCQKKGKQVDIKPSREGDLSVAKVFVDGEFVASASSSQKDHAKLEAAKIALGKLAHL 240

Query: 1002 XXXXXXXXXSTMKLDFCAGVDGTFEIEAAKNKLHELCAMKKWPKPVFNIEKDVGPPHDKK 1181
                     + MKL+F A  +GT+ +EA KNKL ELCA+KKWP P + IEKD GP H+KK
Sbjct: 241  VPSTDKKSATNMKLNFAADENGTWVVEAPKNKLRELCAVKKWPIPEYIIEKDSGPSHEKK 300

Query: 1182 FVCSVQIVTSAGILQMLGDEKPRVRDSEHSAASLMIWALQECNF 1313
            FVC+VQI T+ GILQM GDEK RV+D+E+SAASLMI ALQ+ N+
Sbjct: 301  FVCAVQIPTADGILQMSGDEKSRVKDAENSAASLMIRALQQYNY 344


>ref|XP_002529460.1| ribonuclease III, putative [Ricinus communis]
            gi|223531076|gb|EEF32926.1| ribonuclease III, putative
            [Ricinus communis]
          Length = 342

 Score =  409 bits (1050), Expect = e-111
 Identities = 212/341 (62%), Positives = 259/341 (75%), Gaps = 3/341 (0%)
 Frame = +3

Query: 300  MEASVLV-AVEEIIGYTFRNTKLLEDALTHCSVVDAVSYERLEFLGDVVLGLAISNHLFM 476
            MEAS  + AVE+I+ YTF+N +L+E+ALTH S   + +Y+RLEF+GD  LGLA+SNH+F+
Sbjct: 1    MEASSSISAVEKILNYTFKNKQLVEEALTHSSYTASPNYQRLEFIGDAALGLALSNHVFL 60

Query: 477  AHPSLDPGQLSLLRAANVSTEKLARVAVRHGLHRFVRHSSPPLVDKVTEFVDAVAEEHD- 653
            A+P LDPG LSLLRAAN+STEKLARVAV+HGL RF+RH++  L DKV EF DAV  E D 
Sbjct: 61   AYPDLDPGHLSLLRAANISTEKLARVAVKHGLFRFLRHNATALDDKVKEFSDAVLREEDE 120

Query: 654  IVVYGGLVKAPKILADIVESVAAAVYVDVGFDLQKLWVIIRHLLEPIVTLGDLEQQPQPV 833
             V +GG VKAPK+LADIVESVAAAVYVDV FDLQ+LWVI R LLEPIVT  DL+QQPQP+
Sbjct: 121  AVAHGGTVKAPKVLADIVESVAAAVYVDVNFDLQRLWVIFRGLLEPIVTPEDLQQQPQPM 180

Query: 834  TMLFEICQKNGKEVDIKHRRNGDKSIASVYVDGHLVASASSDQKDIARXXXXXXXXXXXX 1013
            TMLFE+CQK GKEVDI H ++G K+IAS+YVDG  VAS SS+QK+ A+            
Sbjct: 181  TMLFELCQKKGKEVDIVHWKSGTKNIASIYVDGGFVASGSSEQKETAKLNAAKGALQKLS 240

Query: 1014 XXXXXSTMKL-DFCAGVDGTFEIEAAKNKLHELCAMKKWPKPVFNIEKDVGPPHDKKFVC 1190
                 +     D    + G+FEIE AK KLHELC  KKWPKP +NIEK+ GP H+KK+VC
Sbjct: 241  HLMPSNLGHFEDVLKTIGGSFEIEGAKRKLHELCGKKKWPKPTYNIEKETGPSHEKKYVC 300

Query: 1191 SVQIVTSAGILQMLGDEKPRVRDSEHSAASLMIWALQECNF 1313
            SVQI T  G+L M GDEK RV+++++SAASLMI ALQE N+
Sbjct: 301  SVQIATVDGVLYMRGDEKMRVKEADNSAASLMIRALQESNY 341


>ref|XP_003602658.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
            gi|355491706|gb|AES72909.1| Endoribonuclease Dicer-like
            protein [Medicago truncatula]
          Length = 344

 Score =  402 bits (1033), Expect = e-109
 Identities = 213/336 (63%), Positives = 255/336 (75%), Gaps = 2/336 (0%)
 Frame = +3

Query: 297  RMEASVLVAVEEIIGYTFRNTKLLEDALTHCSVVDAVSYERLEFLGDVVLGLAISNHLFM 476
            +ME SV  AVE+IIGYTFRN  LLE+ALTH S  ++VSYERLEF+GD VLG AISNHLF+
Sbjct: 4    KMEDSV-AAVEKIIGYTFRNKNLLEEALTHSSYPESVSYERLEFIGDAVLGHAISNHLFL 62

Query: 477  AHPSLDPGQLSLLRAANVSTEKLARVAVRHGLHRFVRHSSPPLVDKVTEFVDAVAEEHD- 653
             + ++D  QLSLLR+ANVSTEKLAR AV + LHR++R  +  L + + EF  AV +E   
Sbjct: 63   VYTNVDQRQLSLLRSANVSTEKLARAAVSNCLHRYIRLKTHSLAEHIREFAAAVEQEKGR 122

Query: 654  -IVVYGGLVKAPKILADIVESVAAAVYVDVGFDLQKLWVIIRHLLEPIVTLGDLEQQPQP 830
             IV+YGG VKAPK+LAD+VESVAAAVYVD+ FDL+KLWV+IR LLEPIVTL DLEQ+PQP
Sbjct: 123  AIVLYGGAVKAPKVLADVVESVAAAVYVDLDFDLKKLWVVIRGLLEPIVTLNDLEQKPQP 182

Query: 831  VTMLFEICQKNGKEVDIKHRRNGDKSIASVYVDGHLVASASSDQKDIARXXXXXXXXXXX 1010
            VTML+EIC KNGK+VDI+H RNGDKS ASVYVDG L A ASSDQKDIA+           
Sbjct: 183  VTMLYEICHKNGKKVDIRHSRNGDKSTASVYVDGELFAVASSDQKDIAKLDAAKSAVQKL 242

Query: 1011 XXXXXXSTMKLDFCAGVDGTFEIEAAKNKLHELCAMKKWPKPVFNIEKDVGPPHDKKFVC 1190
                  +T   D C G+DGTFEIE  K KL+ LC  KKWP PV++IE+D G P +K FV 
Sbjct: 243  ERVLPITTTTPDNCKGLDGTFEIEEPKQKLYALCGRKKWPTPVYSIERDEGTPQNKIFVT 302

Query: 1191 SVQIVTSAGILQMLGDEKPRVRDSEHSAASLMIWAL 1298
            SVQ+ T  G L+MLG+EK RV+DS++SAASLMI AL
Sbjct: 303  SVQVATPDGTLKMLGEEKSRVKDSQNSAASLMIRAL 338


>gb|AFK35665.1| unknown [Medicago truncatula]
          Length = 344

 Score =  399 bits (1025), Expect = e-109
 Identities = 212/336 (63%), Positives = 254/336 (75%), Gaps = 2/336 (0%)
 Frame = +3

Query: 297  RMEASVLVAVEEIIGYTFRNTKLLEDALTHCSVVDAVSYERLEFLGDVVLGLAISNHLFM 476
            +ME SV  AVE+IIGYTFRN  LLE+ALTH S  ++VSYERLEF+GD VLG AISNHLF+
Sbjct: 4    KMEDSV-AAVEKIIGYTFRNKNLLEEALTHSSYPESVSYERLEFIGDAVLGHAISNHLFL 62

Query: 477  AHPSLDPGQLSLLRAANVSTEKLARVAVRHGLHRFVRHSSPPLVDKVTEFVDAVAEEHD- 653
             + ++D  QLSLLR+ANVSTEKLAR AV + LHR++R  +  L + + EF  AV +E   
Sbjct: 63   VYTNVDQRQLSLLRSANVSTEKLARAAVSNCLHRYIRLKTHSLAEHIREFAAAVEQEKGR 122

Query: 654  -IVVYGGLVKAPKILADIVESVAAAVYVDVGFDLQKLWVIIRHLLEPIVTLGDLEQQPQP 830
             IV+YGG VKA K+LAD+VESVAAAVYVD+ FDL+KLWV+IR LLEPIVTL DLEQ+PQP
Sbjct: 123  AIVLYGGAVKASKVLADVVESVAAAVYVDLDFDLKKLWVVIRGLLEPIVTLNDLEQKPQP 182

Query: 831  VTMLFEICQKNGKEVDIKHRRNGDKSIASVYVDGHLVASASSDQKDIARXXXXXXXXXXX 1010
            VTML+EIC KNGK+VDI+H RNGDKS ASVYVDG L A ASSDQKDIA+           
Sbjct: 183  VTMLYEICHKNGKKVDIRHSRNGDKSTASVYVDGELFAVASSDQKDIAKLDAAKSAVQKL 242

Query: 1011 XXXXXXSTMKLDFCAGVDGTFEIEAAKNKLHELCAMKKWPKPVFNIEKDVGPPHDKKFVC 1190
                  +T   D C G+DGTFEIE  K KL+ LC  KKWP PV++IE+D G P +K FV 
Sbjct: 243  ERVLPITTTTPDNCKGLDGTFEIEEPKQKLYALCGRKKWPTPVYSIERDEGTPQNKIFVT 302

Query: 1191 SVQIVTSAGILQMLGDEKPRVRDSEHSAASLMIWAL 1298
            SVQ+ T  G L+MLG+EK RV+DS++SAASLMI AL
Sbjct: 303  SVQVATPDGTLKMLGEEKSRVKDSQNSAASLMIRAL 338


>ref|XP_002278706.1| PREDICTED: ribonuclease 3-like protein 2-like [Vitis vinifera]
          Length = 364

 Score =  395 bits (1016), Expect = e-107
 Identities = 208/340 (61%), Positives = 252/340 (74%)
 Frame = +3

Query: 294  KRMEASVLVAVEEIIGYTFRNTKLLEDALTHCSVVDAVSYERLEFLGDVVLGLAISNHLF 473
            K MEASV  AVE II Y FRN KLLE+ALTH S  D+ SY+RLEF+GD  LG A+SN++F
Sbjct: 26   KSMEASV-EAVERIINYKFRNKKLLEEALTHSSYTDSASYQRLEFIGDAALGCALSNYVF 84

Query: 474  MAHPSLDPGQLSLLRAANVSTEKLARVAVRHGLHRFVRHSSPPLVDKVTEFVDAVAEEHD 653
            +A+PSLDPGQLSL+RAAN+STEKLARVAVR GL+++VRH++  L DKV EF  AV EE D
Sbjct: 85   LAYPSLDPGQLSLIRAANISTEKLARVAVRVGLYQYVRHNAAALDDKVREFALAVQEEGD 144

Query: 654  IVVYGGLVKAPKILADIVESVAAAVYVDVGFDLQKLWVIIRHLLEPIVTLGDLEQQPQPV 833
             V+YGG VKAPK LADIVESVAAA+YVD  FDLQ LWVI R LLEPIVT   L+QQPQPV
Sbjct: 145  SVLYGGSVKAPKFLADIVESVAAAIYVDCNFDLQVLWVIFRGLLEPIVTHEALQQQPQPV 204

Query: 834  TMLFEICQKNGKEVDIKHRRNGDKSIASVYVDGHLVASASSDQKDIARXXXXXXXXXXXX 1013
            T+L+E+CQK+GK VDIKH R G K+IASVYV G  +AS SSD+K+IA+            
Sbjct: 205  TLLYELCQKDGKHVDIKHWRKGSKNIASVYVGGKFIASGSSDEKEIAKLNAAKEALQKLS 264

Query: 1014 XXXXXSTMKLDFCAGVDGTFEIEAAKNKLHELCAMKKWPKPVFNIEKDVGPPHDKKFVCS 1193
                 + M  +    ++G+ EI+ AK KLHE C+ KKWPKP + IEK+VGP H+K F+CS
Sbjct: 265  SKLKDTEMTQNNLE-INGSCEIDGAKQKLHEFCSKKKWPKPSYRIEKEVGPAHEKGFLCS 323

Query: 1194 VQIVTSAGILQMLGDEKPRVRDSEHSAASLMIWALQECNF 1313
            V I T  G+L M GD KPRV+D+E+SAAS MI  L E  +
Sbjct: 324  VHIETVDGVLVMQGDTKPRVKDAENSAASFMICTLYESRY 363


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