BLASTX nr result

ID: Glycyrrhiza23_contig00024842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024842
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_003610665.1| F-box/LRR-repeat protein [Medicago truncatul...   103   2e-20
ref|XP_002305601.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...    82   5e-14

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score =  134 bits (338), Expect = 6e-30
 Identities = 81/172 (47%), Positives = 102/172 (59%), Gaps = 4/172 (2%)
 Frame = +1

Query: 1   DFVERVIALREPSNLDLFALACEVLTDAPRINSWVSYAVNHNVQHLLLQLSQIQEGPFEL 180
           DFV+RV+ALR PSN+  F L+CEV  D  R+ +W+S AVN NV+ L L+L    E  F L
Sbjct: 83  DFVDRVLALRGPSNIVQFYLSCEVKDDPSRVGTWISAAVNRNVKDLYLELRDF-EASFVL 141

Query: 181 PHCLFTCDTLKKAVIVANTLLKLPSSIHFSNLKFLTLCYVAFPEHKSTQQLFCGLPVLEE 360
           PHCLF C+TL +  I    +LKLPSSI  S LK L L  V F +  STQQLF  LP L E
Sbjct: 142 PHCLFNCETLTELEINMPYILKLPSSISLSCLKILNLYEVIFTDDHSTQQLF-SLPNLVE 200

Query: 361 LTLDRCTWWNVKTIAIDPPMLLKLVIIEN-EADPAN---CRFIIFAKNLKSF 504
           L +  C W N+  ++I  P L  L I E  ++ PA+   C   IF  +L  F
Sbjct: 201 LEIHECNWMNLVAVSISAPKLQSLDIHEPCQSSPASLGGCHVRIFGTHLADF 252


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  107 bits (267), Expect = 1e-21
 Identities = 70/171 (40%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
 Frame = +1

Query: 7   VERVIALREPSNLDLFALACEVLTDAPRINSWVSYAVNHNVQHLLLQLSQIQEGP-FELP 183
           VERV+ LR+ SN++ F L+C +  DA R  +WVS AVN NV+ L +   +  E   F  P
Sbjct: 98  VERVLLLRDSSNIEKFTLSCGI-DDATRTRTWVSAAVNRNVKELCVNFYEGGESESFVSP 156

Query: 184 HCLFTCDTLKKAVIVANTLLKLPSSIHFSNLKFLTLCYVAFPEHKSTQQLFCGLPVLEEL 363
            CLFTC TL K  I ++ +L+L SSI    LK L+L +V FP+  STQQ+   L  LE+L
Sbjct: 157 LCLFTCATLTKLKITSHGVLRLSSSISLPCLKILSLQHVVFPDEDSTQQIL-NLRTLEKL 215

Query: 364 TLDRCTWWNVKTIAIDPPMLLKLVIIENEADPAN----CRFIIFAKNLKSF 504
            +    W N+K I I  P L  L I E   +       C  +IF   L  F
Sbjct: 216 KISYYDWKNLKAITISAPKLRSLDICEMHRNDLRGSDACHVMIFGTALTFF 266


>ref|XP_003610665.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355512000|gb|AES93623.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 489

 Score =  103 bits (256), Expect = 2e-20
 Identities = 60/146 (41%), Positives = 85/146 (58%)
 Frame = +1

Query: 1   DFVERVIALREPSNLDLFALACEVLTDAPRINSWVSYAVNHNVQHLLLQLSQIQEGPFEL 180
           DFVE++      S+L  F+L  EV  +APR+  W+S  VN N++ L L+L  ++E P  L
Sbjct: 81  DFVEKLRVFCNTSSLKKFSLFFEVGMEAPRVTKWLSIFVNPNIEELKLELYTVKE-PLVL 139

Query: 181 PHCLFTCDTLKKAVIVANTLLKLPSSIHFSNLKFLTLCYVAFPEHKSTQQLFCGLPVLEE 360
               FT + L K  +  + ++KLPS+I+F NL  LTL +V FP +  T + F  L  L+E
Sbjct: 140 SDQFFTSEKLTKFELSMSQVIKLPSTINFQNLVTLTLKHVIFPNYYCTTEFFLSLRSLKE 199

Query: 361 LTLDRCTWWNVKTIAIDPPMLLKLVI 438
           +TL  C W  V TI I  P+L KL I
Sbjct: 200 MTLIDCNWKKVGTIIITCPLLQKLFI 225


>ref|XP_002305601.1| predicted protein [Populus trichocarpa] gi|222848565|gb|EEE86112.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 58/151 (38%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
 Frame = +1

Query: 61  ACEVLTDAPRINSWVSYAVNHNVQHLLLQLSQIQEGPFELPHCLFTCDTLKKAVIVANTL 240
           +C+V +DA  IN+W+  A+    Q L L L Q       LPHCLFT  +L    +     
Sbjct: 76  SCDVHSDASHINTWIFAALCCKFQELKLDLYQYNANESLLPHCLFTFQSLTVLELYLFHD 135

Query: 241 LKLPSSIHFSNLKFLTLCYVAFPEHKSTQQLFCGLPVLEELTLDRCTWWNVKTIAIDPPM 420
           LKL S+I   NLK L L ++ F +  ST QLF G   L ++TLD CTW + K + I  PM
Sbjct: 136 LKLLSTICLPNLKELKLSFITFVDDHST-QLFDGCLNLRKVTLDECTWKDEKFVFISSPM 194

Query: 421 LLKLVIIE---NEADPANCRFIIFAKNLKSF 504
           L  L I +   ++  P +C+ +    NLK F
Sbjct: 195 LKFLSICDLTWDDGSPNDCQVVTCGTNLKFF 225


>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 467

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 2/145 (1%)
 Frame = +1

Query: 73  LTDAPRINSWVSYAVNHNVQHLLLQLSQIQEGPFELPHCLFTCDTLKKAVIVANTLLKLP 252
           + DA +++S +S A+ H+V  L L L   +   F LP+      +L K  IV   L  +P
Sbjct: 107 IVDAGKVSSMLSSALMHDVHDLTLNLES-ENSRFVLPNSFSASRSLTKLDIVFGFLDSVP 165

Query: 253 SSIHFSNLKFLTLCYVAFPEHKSTQQLFCGLPVLEELTLDRCTWWNVKTIAIDPPMLLKL 432
             I F +LK L+  +V F   KS Q+LF G PVL++L+ ++C W N+  I++  P L KL
Sbjct: 166 DGICFPSLKILSFAHVTFTNEKSAQRLFSGCPVLQDLSFEKCYWVNI-NISVAIPTLKKL 224

Query: 433 VII--ENEADPANCRFIIFAKNLKS 501
            I    +  D  +C F I A NL S
Sbjct: 225 DIFFRSSSLDRNSCMFKIDAVNLLS 249


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