BLASTX nr result

ID: Glycyrrhiza23_contig00024820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024820
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522757.1| PREDICTED: cyclin-D4-1-like [Glycine max]         108   6e-22
ref|XP_003602950.1| Cyclin d2 [Medicago truncatula] gi|355491998...   100   1e-19
gb|ACU21437.1| unknown [Glycine max]                                  100   2e-19
ref|NP_001237137.1| cyclin d2 [Glycine max] gi|42362309|gb|AAS13...   100   2e-19
ref|XP_003518252.1| PREDICTED: cyclin-D4-1-like [Glycine max]          96   4e-18

>ref|XP_003522757.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 352

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/74 (74%), Positives = 61/74 (82%), Gaps = 6/74 (8%)
 Frame = -2

Query: 364 CVKMIQELSSNS------SASVPCVPQSPIGVLDAVCFSYRSDDTNAGGSCSSHNNSPDA 203
           CVKMIQELS NS      SASV C+PQSPIGVLDA+CFSY+SDDTNAG S +S +NSP A
Sbjct: 279 CVKMIQELSCNSGSAKDSSASVTCLPQSPIGVLDALCFSYKSDDTNAGSSVNSSHNSPVA 338

Query: 202 KRRKLNKTCGEELL 161
           KRRKLNKTCG +LL
Sbjct: 339 KRRKLNKTCGADLL 352


>ref|XP_003602950.1| Cyclin d2 [Medicago truncatula] gi|355491998|gb|AES73201.1| Cyclin
           d2 [Medicago truncatula]
          Length = 362

 Score =  100 bits (249), Expect = 1e-19
 Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 11/79 (13%)
 Frame = -2

Query: 364 CVKMIQELSSNS--------SASVPCVPQSPIGVLDAVCFSYRSDDTNA--GGSC-SSHN 218
           CV  +QE+S NS        ++SVP VPQSP+GVLD +CFSY+SDDTNA  GGSC SSH+
Sbjct: 284 CVGKVQEMSLNSVFTGKDSSASSVPSVPQSPMGVLDTLCFSYKSDDTNAGGGGSCSSSHS 343

Query: 217 NSPDAKRRKLNKTCGEELL 161
           +SPDAKRRKLNKTCG ELL
Sbjct: 344 SSPDAKRRKLNKTCGSELL 362


>gb|ACU21437.1| unknown [Glycine max]
          Length = 352

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/74 (68%), Positives = 58/74 (78%), Gaps = 6/74 (8%)
 Frame = -2

Query: 364 CVKMIQELSSNS------SASVPCVPQSPIGVLDAVCFSYRSDDTNAGGSCSSHNNSPDA 203
           CV+MIQELS NS      SASV C+PQSPIGVLDA+CF+Y+SDDTNA    +S +NSP A
Sbjct: 279 CVQMIQELSCNSGSAKDSSASVTCLPQSPIGVLDALCFNYKSDDTNASSCVNSSHNSPVA 338

Query: 202 KRRKLNKTCGEELL 161
           KRRKLNKTCG E L
Sbjct: 339 KRRKLNKTCGAEQL 352


>ref|NP_001237137.1| cyclin d2 [Glycine max] gi|42362309|gb|AAS13370.1| cyclin d2
           [Glycine max]
          Length = 361

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/74 (68%), Positives = 58/74 (78%), Gaps = 6/74 (8%)
 Frame = -2

Query: 364 CVKMIQELSSNS------SASVPCVPQSPIGVLDAVCFSYRSDDTNAGGSCSSHNNSPDA 203
           CV+MIQELS NS      SASV C+PQSPIGVLDA+CF+Y+SDDTNA    +S +NSP A
Sbjct: 288 CVQMIQELSCNSGSAKDSSASVTCLPQSPIGVLDALCFNYKSDDTNASSCVNSSHNSPVA 347

Query: 202 KRRKLNKTCGEELL 161
           KRRKLNKTCG E L
Sbjct: 348 KRRKLNKTCGAEQL 361


>ref|XP_003518252.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 357

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 53/77 (68%), Positives = 58/77 (75%), Gaps = 12/77 (15%)
 Frame = -2

Query: 364 CVKMIQELSSNS----------SASVPCVPQSPIGVLDAVCFSYRSDDTNAGGSC--SSH 221
           CVK+IQEL+SNS          S SVP VPQSPIGVL+  CFSY+SDDTNA  SC  +SH
Sbjct: 282 CVKLIQELASNSGGGSAKGDSASVSVPSVPQSPIGVLNTECFSYKSDDTNA-ASCANTSH 340

Query: 220 NNSPDAKRRKLNKTCGE 170
           NNSPDAKRRKLNKT GE
Sbjct: 341 NNSPDAKRRKLNKTFGE 357


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