BLASTX nr result

ID: Glycyrrhiza23_contig00024819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024819
         (848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554160.1| PREDICTED: DNA helicase INO80-like isoform 2...   328   1e-87
ref|XP_003554159.1| PREDICTED: DNA helicase INO80-like isoform 1...   328   1e-87
ref|XP_003520510.1| PREDICTED: DNA helicase INO80-like [Glycine ...   316   4e-84
ref|XP_003537256.1| PREDICTED: DNA helicase INO80-like [Glycine ...   281   2e-73
ref|XP_003625104.1| Chromatin remodeling complex subunit [Medica...   265   1e-68

>ref|XP_003554160.1| PREDICTED: DNA helicase INO80-like isoform 2 [Glycine max]
          Length = 1542

 Score =  328 bits (840), Expect = 1e-87
 Identities = 167/224 (74%), Positives = 185/224 (82%), Gaps = 1/224 (0%)
 Frame = -1

Query: 671 MDHTNKPNHSHSLSYSTLFNLEPLLNFQLPQQDDDFDYYGNSSQDEESRDSQGGGAIANH 492
           MDH  +P    SLSYSTLFNLEPL+NFQLP+QDDDFDYYGNSSQDE SRDS+GGG I NH
Sbjct: 1   MDH--RPKSKDSLSYSTLFNLEPLMNFQLPKQDDDFDYYGNSSQDE-SRDSEGGG-ITNH 56

Query: 491 SNGNVHGREVNLLKKRGRSQNSDDEDRGSFYGTYMTEERYRSMLGDHVQKYKRRSKEASS 312
            NGNVH +EVNL KKR  S NSD+E++ SFYG +MTEERYRSMLG+H+QKYKRR K   S
Sbjct: 57  GNGNVHEKEVNLFKKRRWSLNSDNEEKTSFYGAHMTEERYRSMLGEHIQKYKRRFKGTLS 116

Query: 311 SPAQNWVALPPVKSNTGLKPRKLGNDHR-GGLHAAETTSEWLYDSNSQKQGNYRDADSIQ 135
           SPAQN  A P VKSNTGLK RK GN+HR GGLH AE+TSEW+ DS+SQK GNYRDAD   
Sbjct: 117 SPAQNQAAAPLVKSNTGLKARKSGNEHRGGGLHVAESTSEWMNDSSSQKPGNYRDADFSP 176

Query: 134 QRGTDRVMYEPAILEIGDGITYKIPPVYDKLATMLDLPSFSDIH 3
           Q GTDR+MYEPA L+IGDGI YKIPPVYDKLA  L+LPSFSDIH
Sbjct: 177 QYGTDRIMYEPASLDIGDGIIYKIPPVYDKLAGALNLPSFSDIH 220


>ref|XP_003554159.1| PREDICTED: DNA helicase INO80-like isoform 1 [Glycine max]
          Length = 1531

 Score =  328 bits (840), Expect = 1e-87
 Identities = 167/224 (74%), Positives = 185/224 (82%), Gaps = 1/224 (0%)
 Frame = -1

Query: 671 MDHTNKPNHSHSLSYSTLFNLEPLLNFQLPQQDDDFDYYGNSSQDEESRDSQGGGAIANH 492
           MDH  +P    SLSYSTLFNLEPL+NFQLP+QDDDFDYYGNSSQDE SRDS+GGG I NH
Sbjct: 1   MDH--RPKSKDSLSYSTLFNLEPLMNFQLPKQDDDFDYYGNSSQDE-SRDSEGGG-ITNH 56

Query: 491 SNGNVHGREVNLLKKRGRSQNSDDEDRGSFYGTYMTEERYRSMLGDHVQKYKRRSKEASS 312
            NGNVH +EVNL KKR  S NSD+E++ SFYG +MTEERYRSMLG+H+QKYKRR K   S
Sbjct: 57  GNGNVHEKEVNLFKKRRWSLNSDNEEKTSFYGAHMTEERYRSMLGEHIQKYKRRFKGTLS 116

Query: 311 SPAQNWVALPPVKSNTGLKPRKLGNDHR-GGLHAAETTSEWLYDSNSQKQGNYRDADSIQ 135
           SPAQN  A P VKSNTGLK RK GN+HR GGLH AE+TSEW+ DS+SQK GNYRDAD   
Sbjct: 117 SPAQNQAAAPLVKSNTGLKARKSGNEHRGGGLHVAESTSEWMNDSSSQKPGNYRDADFSP 176

Query: 134 QRGTDRVMYEPAILEIGDGITYKIPPVYDKLATMLDLPSFSDIH 3
           Q GTDR+MYEPA L+IGDGI YKIPPVYDKLA  L+LPSFSDIH
Sbjct: 177 QYGTDRIMYEPASLDIGDGIIYKIPPVYDKLAGALNLPSFSDIH 220


>ref|XP_003520510.1| PREDICTED: DNA helicase INO80-like [Glycine max]
          Length = 1543

 Score =  316 bits (810), Expect = 4e-84
 Identities = 163/224 (72%), Positives = 183/224 (81%), Gaps = 1/224 (0%)
 Frame = -1

Query: 671 MDHTNKPNHSHSLSYSTLFNLEPLLNFQLPQQDDDFDYYGNSSQDEESRDSQGGGAIANH 492
           MDH  +P    SLSYSTLFNLE L+NFQLP+QD+DFDYYGNSSQDE SRDSQG G IANH
Sbjct: 1   MDH--RPKSKESLSYSTLFNLESLMNFQLPEQDNDFDYYGNSSQDE-SRDSQGVG-IANH 56

Query: 491 SNGNVHGREVNLLKKRGRSQNSDDEDRGSFYGTYMTEERYRSMLGDHVQKYKRRSKEASS 312
           SNGNVH +EVNL KKR  S NSD+E++ SFYGT+MTEERYRSMLG+H+QKYKRR K   +
Sbjct: 57  SNGNVHEKEVNLFKKRRWSLNSDNEEKSSFYGTHMTEERYRSMLGEHIQKYKRRFKGTLN 116

Query: 311 SPAQNWVALPPVKSNTGLKPRKLGNDHR-GGLHAAETTSEWLYDSNSQKQGNYRDADSIQ 135
           SPAQN  A+P VKSNTGLK  K GN+ R GGLH AE+TSEW+ DS SQK GNYR+AD   
Sbjct: 117 SPAQNQAAVPLVKSNTGLKAHKSGNERRGGGLHVAESTSEWMNDSGSQKPGNYRNADFSP 176

Query: 134 QRGTDRVMYEPAILEIGDGITYKIPPVYDKLATMLDLPSFSDIH 3
           Q GTDR+MYEPA L+IGDGI YKIPPVYDKLA  L+LPS SDIH
Sbjct: 177 QYGTDRIMYEPASLDIGDGIIYKIPPVYDKLAGALNLPSCSDIH 220


>ref|XP_003537256.1| PREDICTED: DNA helicase INO80-like [Glycine max]
          Length = 1460

 Score =  281 bits (718), Expect = 2e-73
 Identities = 146/226 (64%), Positives = 175/226 (77%), Gaps = 3/226 (1%)
 Frame = -1

Query: 671 MDHTNKPNHSHSLSYSTLFNLEPLLNFQLPQQDDD-FDYYGNSSQDEESRDSQGGGAIAN 495
           MD  +K NHS   SYSTLFNLEPL NF+LP++DDD FDYYGN+SQ++ESRDSQ G    N
Sbjct: 1   MDRKSKRNHS--FSYSTLFNLEPLKNFKLPREDDDDFDYYGNNSQEDESRDSQAGER-EN 57

Query: 494 HSNGNVHGREVNLLKKRGRSQNSD--DEDRGSFYGTYMTEERYRSMLGDHVQKYKRRSKE 321
           + NGNVH RE N   KR  S+NSD  DE++G +YGT+MT+ERY+SMLGDHVQKYKRR K+
Sbjct: 58  YCNGNVHAREQNSSSKRVWSENSDTDDENKGRYYGTHMTQERYQSMLGDHVQKYKRRRKD 117

Query: 320 ASSSPAQNWVALPPVKSNTGLKPRKLGNDHRGGLHAAETTSEWLYDSNSQKQGNYRDADS 141
           A S+  QN V +P VKSN GLK +K GND RG  HA E  SEWL D   QKQGN+  AD 
Sbjct: 118 AMSNTDQNQVVVPLVKSNNGLKIQKSGNDCRGASHAEERASEWLQD---QKQGNFSRADF 174

Query: 140 IQQRGTDRVMYEPAILEIGDGITYKIPPVYDKLATMLDLPSFSDIH 3
            QQ GTDR+MYEPA+L+IG+GI+Y+IPP+YDKLA ML+LP+F DIH
Sbjct: 175 KQQYGTDRIMYEPAVLDIGNGISYEIPPIYDKLAPMLNLPNFLDIH 220


>ref|XP_003625104.1| Chromatin remodeling complex subunit [Medicago truncatula]
           gi|355500119|gb|AES81322.1| Chromatin remodeling complex
           subunit [Medicago truncatula]
          Length = 1529

 Score =  265 bits (676), Expect = 1e-68
 Identities = 131/211 (62%), Positives = 164/211 (77%)
 Frame = -1

Query: 635 LSYSTLFNLEPLLNFQLPQQDDDFDYYGNSSQDEESRDSQGGGAIANHSNGNVHGREVNL 456
           + +STLFNL+ L+NF+LP+QDDDF+YYGNSSQDE SR ++G  AI +HSNGNV GR+VNL
Sbjct: 1   MDHSTLFNLQSLVNFELPEQDDDFEYYGNSSQDE-SRITRGV-AIGSHSNGNVSGRDVNL 58

Query: 455 LKKRGRSQNSDDEDRGSFYGTYMTEERYRSMLGDHVQKYKRRSKEASSSPAQNWVALPPV 276
           LKKR  S+NSD+E++  FY T + EERYRSMLGDH++KYKRR K  SSSP  N V +P +
Sbjct: 59  LKKRSWSRNSDNEEKSGFYETPVMEERYRSMLGDHIKKYKRRFKGNSSSPGPNQVPVPFL 118

Query: 275 KSNTGLKPRKLGNDHRGGLHAAETTSEWLYDSNSQKQGNYRDADSIQQRGTDRVMYEPAI 96
           KSN GLK  K GN+   GLH  ET SEW+  SN+QK GN+ D D I Q  T+RV YEPA 
Sbjct: 119 KSNNGLKAHKPGNERNRGLHDDETLSEWINGSNAQKSGNFLDTDFIPQHRTNRVRYEPAY 178

Query: 95  LEIGDGITYKIPPVYDKLATMLDLPSFSDIH 3
           +++G+GI YKIPP+YDKLA +++LPS SDIH
Sbjct: 179 VDVGNGIAYKIPPIYDKLAPLVNLPSLSDIH 209


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