BLASTX nr result

ID: Glycyrrhiza23_contig00024801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024801
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591356.1| Pentatricopeptide repeat-containing protein ...   207   9e-52
ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat...   202   2e-50
ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat...   197   1e-48
ref|XP_002310039.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46
ref|XP_002889402.1| hypothetical protein ARALYDRAFT_470202 [Arab...   186   2e-45

>ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355480404|gb|AES61607.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 518

 Score =  207 bits (526), Expect = 9e-52
 Identities = 98/116 (84%), Positives = 107/116 (92%)
 Frame = +2

Query: 2   FNHVWDILIEARRKDQNVITPRTVMIVLGRVAKVCSVRQTVESFRKFKKLVPDFDTGCFN 181
           F+HVW++LIEARRKDQNVITPRTVM+VLGRVAKVCSVRQTVE+FRKFKK+VPD+   CFN
Sbjct: 110 FDHVWELLIEARRKDQNVITPRTVMVVLGRVAKVCSVRQTVETFRKFKKIVPDYGVNCFN 169

Query: 182 GLLRTLCQEKSMTDARNVYHSLKHSFRPNLQTFNILLSGWKTPEDAEGFFMEMREM 349
            LLRTLCQEKSMTDARNVYHSLKH+FRPNLQTFNILLSGWK  EDAE F  EM+EM
Sbjct: 170 ALLRTLCQEKSMTDARNVYHSLKHNFRPNLQTFNILLSGWKNVEDAELFVNEMKEM 225


>ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Glycine max]
          Length = 500

 Score =  202 bits (515), Expect = 2e-50
 Identities = 96/116 (82%), Positives = 104/116 (89%)
 Frame = +2

Query: 2   FNHVWDILIEARRKDQNVITPRTVMIVLGRVAKVCSVRQTVESFRKFKKLVPDFDTGCFN 181
           F  VW++LIEARRKDQ  IT RTVM+VLGR+AKVCSVRQTVESFRKF+KLV +FDT CFN
Sbjct: 116 FGQVWELLIEARRKDQTAITARTVMVVLGRIAKVCSVRQTVESFRKFRKLVQEFDTNCFN 175

Query: 182 GLLRTLCQEKSMTDARNVYHSLKHSFRPNLQTFNILLSGWKTPEDAEGFFMEMREM 349
            LLRTLCQEKSM DARNVYHSLKH FRPNLQTFNILLSGWKTPEDA+ FF EM+EM
Sbjct: 176 ALLRTLCQEKSMADARNVYHSLKHRFRPNLQTFNILLSGWKTPEDADLFFKEMKEM 231


>ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Vitis vinifera]
          Length = 526

 Score =  197 bits (500), Expect = 1e-48
 Identities = 89/116 (76%), Positives = 107/116 (92%)
 Frame = +2

Query: 2   FNHVWDILIEARRKDQNVITPRTVMIVLGRVAKVCSVRQTVESFRKFKKLVPDFDTGCFN 181
           F+ +W++L++ RRKDQ++I+PR+V +VLGR+AKVCSV+QTVESFRKFKKLVP+FDT CFN
Sbjct: 142 FDQIWELLVDMRRKDQSLISPRSVQVVLGRIAKVCSVKQTVESFRKFKKLVPEFDTACFN 201

Query: 182 GLLRTLCQEKSMTDARNVYHSLKHSFRPNLQTFNILLSGWKTPEDAEGFFMEMREM 349
            LLRTLCQEKSM DARNVYHSLKH FRP+L+TFNILLSGWK+ E+AEGFF EMREM
Sbjct: 202 ALLRTLCQEKSMRDARNVYHSLKHDFRPDLRTFNILLSGWKSAEEAEGFFDEMREM 257


>ref|XP_002310039.1| predicted protein [Populus trichocarpa] gi|222852942|gb|EEE90489.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score =  189 bits (479), Expect = 3e-46
 Identities = 87/116 (75%), Positives = 103/116 (88%)
 Frame = +2

Query: 2   FNHVWDILIEARRKDQNVITPRTVMIVLGRVAKVCSVRQTVESFRKFKKLVPDFDTGCFN 181
           F+H+WD+LI+ +RKD+N+ITPRT+ +VLGRVAKVCSVR TVESF KFK+LVP FDT CFN
Sbjct: 125 FDHIWDVLIDIKRKDRNLITPRTLQVVLGRVAKVCSVRMTVESFWKFKRLVPVFDTSCFN 184

Query: 182 GLLRTLCQEKSMTDARNVYHSLKHSFRPNLQTFNILLSGWKTPEDAEGFFMEMREM 349
            LLRTLCQEKSM+DARNVYH LK  FRPNLQTFNILLSGWK+ E+AE F+ EM+E+
Sbjct: 185 ALLRTLCQEKSMSDARNVYHHLKKGFRPNLQTFNILLSGWKSSEEAELFYEEMKEL 240


>ref|XP_002889402.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
           lyrata] gi|297335244|gb|EFH65661.1| hypothetical protein
           ARALYDRAFT_470202 [Arabidopsis lyrata subsp. lyrata]
          Length = 490

 Score =  186 bits (471), Expect = 2e-45
 Identities = 87/115 (75%), Positives = 104/115 (90%), Gaps = 1/115 (0%)
 Frame = +2

Query: 2   FNHVWDILIEARRKDQNVITPRTVMIVLGRVAKVCSVRQTVESFRKFKKLVPDF-DTGCF 178
           F+ +W+ILIE +RKD+++I+PRT+ +VLGRVAK+CSVRQTVESF KFK+LVPDF DT CF
Sbjct: 123 FDQIWEILIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFFDTACF 182

Query: 179 NGLLRTLCQEKSMTDARNVYHSLKHSFRPNLQTFNILLSGWKTPEDAEGFFMEMR 343
           N LLRTLCQEKSMTDARNVYHSLKH F+P+LQTFNILLSGWK+ E+AE FF EM+
Sbjct: 183 NALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEEMK 237


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