BLASTX nr result

ID: Glycyrrhiza23_contig00024796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024796
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41756.1| unknown [Lotus japonicus]                              222   6e-56
ref|XP_003606651.1| Sec14 cytosolic factor [Medicago truncatula]...   182   1e-51
ref|XP_003538001.1| PREDICTED: uncharacterized protein LOC100814...   203   3e-50
ref|XP_003543510.1| PREDICTED: uncharacterized protein LOC100786...   170   2e-40
gb|ACU20082.1| unknown [Glycine max]                                  166   3e-39

>gb|AFK41756.1| unknown [Lotus japonicus]
          Length = 237

 Score =  222 bits (565), Expect = 6e-56
 Identities = 113/140 (80%), Positives = 123/140 (87%)
 Frame = +3

Query: 3   CLFVIRLPAIARVIAQTFIQVLKPATKKKLKIEGEMYQKVLYDNLMTLPSYLGGCCTCAR 182
           CLFVIRLPAI RV+AQTFIQVLKPAT+KKLK+ GEMYQKVL DNL TLPSYLGG CTC +
Sbjct: 97  CLFVIRLPAIVRVVAQTFIQVLKPATRKKLKLVGEMYQKVLSDNLPTLPSYLGGSCTCMK 156

Query: 183 CLKMGKRDMQQHHETGTSRIDREEDISANEDSLSLALHQSIELDGRQNNSYDQLLRTAVI 362
           C K+GK D+ Q +ETGTSRIDREEDIS NEDS S  L QS E DGRQNN+YDQLLRTAVI
Sbjct: 157 CAKIGKWDVFQPNETGTSRIDREEDISDNEDSPS--LRQSTEFDGRQNNTYDQLLRTAVI 214

Query: 363 SILVFWVVIALGAGMYEPGS 422
           SILVFWVV+ALGAG+YEPGS
Sbjct: 215 SILVFWVVVALGAGIYEPGS 234


>ref|XP_003606651.1| Sec14 cytosolic factor [Medicago truncatula]
           gi|355507706|gb|AES88848.1| Sec14 cytosolic factor
           [Medicago truncatula]
          Length = 505

 Score =  182 bits (462), Expect(2) = 1e-51
 Identities = 92/121 (76%), Positives = 103/121 (85%), Gaps = 2/121 (1%)
 Frame = +3

Query: 63  VLKPATKKKLKIEGEMYQKVLYDNLMTLPSYLGGCCTCARCLKMGKRDMQQHHETGT--S 236
           VLKPATKKKLKIEGEMY+KVL+DNL T+PSYLGG CTC +C KMGKRD  Q HETGT  S
Sbjct: 384 VLKPATKKKLKIEGEMYKKVLFDNLSTVPSYLGGSCTCVKCSKMGKRDRVQPHETGTSSS 443

Query: 237 RIDREEDISANEDSLSLALHQSIELDGRQNNSYDQLLRTAVISILVFWVVIALGAGMYEP 416
           RI  E+DIS NED  SL LH ++ LD RQ+NSYDQ+LRTAVISI+VFWVVIALGAG+YEP
Sbjct: 444 RIVSEDDISDNEDLPSLRLHPTMVLDDRQSNSYDQVLRTAVISIIVFWVVIALGAGVYEP 503

Query: 417 G 419
           G
Sbjct: 504 G 504



 Score = 47.0 bits (110), Expect(2) = 1e-51
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = +2

Query: 5   FVCHTTSSNCSRYCPDFYSGF 67
           FVCHTTSSNCS YCPDF SGF
Sbjct: 362 FVCHTTSSNCSCYCPDFSSGF 382


>ref|XP_003538001.1| PREDICTED: uncharacterized protein LOC100814843 [Glycine max]
          Length = 490

 Score =  203 bits (516), Expect = 3e-50
 Identities = 104/143 (72%), Positives = 117/143 (81%)
 Frame = +3

Query: 3   CLFVIRLPAIARVIAQTFIQVLKPATKKKLKIEGEMYQKVLYDNLMTLPSYLGGCCTCAR 182
           CLF+IRLPAI RVIAQTFIQVLKP+T+KKLK+ GE+Y+KVLYDN  TLPSYLGG C+C R
Sbjct: 348 CLFIIRLPAIVRVIAQTFIQVLKPSTRKKLKLGGEVYRKVLYDNFPTLPSYLGGSCSCMR 407

Query: 183 CLKMGKRDMQQHHETGTSRIDREEDISANEDSLSLALHQSIELDGRQNNSYDQLLRTAVI 362
           C K+G  D+ Q H TGTSRIDREEDIS N    S  LHQS ELDG Q ++ DQLLR AVI
Sbjct: 408 CSKIGNWDILQPHATGTSRIDREEDISDNRGLPS--LHQSNELDGHQTSNSDQLLRKAVI 465

Query: 363 SILVFWVVIALGAGMYEPGSGHL 431
           SILVFWV IALGAG+Y+PGS HL
Sbjct: 466 SILVFWVFIALGAGIYDPGSLHL 488


>ref|XP_003543510.1| PREDICTED: uncharacterized protein LOC100786191 [Glycine max]
          Length = 484

 Score =  170 bits (431), Expect = 2e-40
 Identities = 87/144 (60%), Positives = 106/144 (73%), Gaps = 2/144 (1%)
 Frame = +3

Query: 3   CLFVIRLPAIARVIAQTFIQVLKPATKKKLKIEGEMYQKVLYDNLMTLPSYLGGCCTCAR 182
           C+FVIRLPA   VIAQTFIQ LKPAT+ KLKIEGEM+QKVL D + TLPSYLGGCCTC +
Sbjct: 341 CMFVIRLPANVHVIAQTFIQDLKPATRNKLKIEGEMHQKVLSDYMPTLPSYLGGCCTCMK 400

Query: 183 CLKMGKRDMQQHHETGTSRIDREEDI--SANEDSLSLALHQSIELDGRQNNSYDQLLRTA 356
           C  +G+ DM Q + TGTSR D  ED   S N++  S  LH   EL+G    +YDQLLRTA
Sbjct: 401 CSNIGQGDMLQTYATGTSRRDGLEDTSDSDNDNEDSPTLHPCDELEGNLYGNYDQLLRTA 460

Query: 357 VISILVFWVVIALGAGMYEPGSGH 428
           ++ IL+FWV IALGA +++P + H
Sbjct: 461 IVGILIFWVFIALGAVVFDPSNRH 484


>gb|ACU20082.1| unknown [Glycine max]
          Length = 240

 Score =  166 bits (421), Expect = 3e-39
 Identities = 86/144 (59%), Positives = 104/144 (72%), Gaps = 2/144 (1%)
 Frame = +3

Query: 3   CLFVIRLPAIARVIAQTFIQVLKPATKKKLKIEGEMYQKVLYDNLMTLPSYLGGCCTCAR 182
           C+FVIRLPA   VIAQTFIQ LKPAT+ KLKIEGEM+QKVL D + TLPSYLGGCCTC +
Sbjct: 97  CMFVIRLPANVHVIAQTFIQDLKPATRNKLKIEGEMHQKVLSDYMPTLPSYLGGCCTCMK 156

Query: 183 CLKMGKRDMQQHHETGTSRIDREEDI--SANEDSLSLALHQSIELDGRQNNSYDQLLRTA 356
           C  +G+ DM Q + TGTSR D  E    S N++  S  LH   EL G    +YDQLLRTA
Sbjct: 157 CSNIGQGDMLQTYATGTSRRDGLEGTSDSDNDNEDSPTLHPCDELKGNLYGNYDQLLRTA 216

Query: 357 VISILVFWVVIALGAGMYEPGSGH 428
           ++ IL+FWV IALGA +++P + H
Sbjct: 217 IVGILIFWVFIALGAVVFDPSNRH 240


Top