BLASTX nr result

ID: Glycyrrhiza23_contig00024773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024773
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620478.1| Chloroplastic group IIA intron splicing faci...    77   1e-12

>ref|XP_003620478.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
           truncatula] gi|355495493|gb|AES76696.1| Chloroplastic
           group IIA intron splicing facilitator CRS1 [Medicago
           truncatula]
          Length = 820

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/79 (54%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
 Frame = +1

Query: 4   TFSSLRTTHHXXXXXXXXXXXXXTAPWLTK----PKRVSESTTTEHPPHPQPVKPKNAVE 171
           TFSSL+TTH              T PWLTK    PKRV+ES   + P  PQP KPKN VE
Sbjct: 57  TFSSLKTTHQSSPNP--------TPPWLTKNPSSPKRVTESPIKDDPFQPQPQKPKNPVE 108

Query: 172 RIVFRLRNLGLASEEEHEQ 228
           RIVFRLRNLGL  EE+ ++
Sbjct: 109 RIVFRLRNLGLVEEEDEQE 127


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