BLASTX nr result

ID: Glycyrrhiza23_contig00024770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024770
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524985.1| PREDICTED: HBS1-like protein-like [Glycine max]   135   3e-30
ref|XP_003629886.1| Elongation factor 1-alpha [Medicago truncatu...    77   1e-12
emb|CBI34018.3| unnamed protein product [Vitis vinifera]               62   4e-08

>ref|XP_003524985.1| PREDICTED: HBS1-like protein-like [Glycine max]
          Length = 793

 Score =  135 bits (341), Expect = 3e-30
 Identities = 67/80 (83%), Positives = 72/80 (90%), Gaps = 2/80 (2%)
 Frame = +1

Query: 1   TSNSNKTVEDISKTPGASKLARSLFQP--QQIPKEVVLFPKQGDGFWTDGSNFYRLENVQ 174
           TSNSNKTVEDISK+PGASKLARSLFQ   QQIPKE+VLFPK  DGF TD SNFY+LENV+
Sbjct: 80  TSNSNKTVEDISKSPGASKLARSLFQSLQQQIPKEIVLFPKPDDGFLTDDSNFYKLENVR 139

Query: 175 GEFHEIHKAFNAQSHPHLNI 234
           GEFHEIHKAF+ QSHPHLNI
Sbjct: 140 GEFHEIHKAFSTQSHPHLNI 159


>ref|XP_003629886.1| Elongation factor 1-alpha [Medicago truncatula]
           gi|355523908|gb|AET04362.1| Elongation factor 1-alpha
           [Medicago truncatula]
          Length = 746

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/49 (77%), Positives = 42/49 (85%), Gaps = 2/49 (4%)
 Frame = +1

Query: 1   TSNSNKTVEDISKTPGASKLARSLFQ--PQQIPKEVVLFPKQGDGFWTD 141
           TSN+NKTVEDI+KTPGASKLA+SLFQ  PQQ PKEV +FP Q  GFWTD
Sbjct: 78  TSNTNKTVEDINKTPGASKLAQSLFQSLPQQSPKEVAIFPMQDIGFWTD 126


>emb|CBI34018.3| unnamed protein product [Vitis vinifera]
          Length = 760

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
 Frame = +1

Query: 4   SNSNKTVEDISKTPGASKLARSLFQ--PQQIPKEVVLFPKQGDGFWTD-GSNFYRLENVQ 174
           +N  KT + I K  GAS +A+SLF   P +  K+ V+F  Q D    +  SNF +  N+Q
Sbjct: 81  NNDTKTADGICKDSGASIMAKSLFAQLPHRTLKKAVIFQLQNDDVVIEESSNFQKHGNIQ 140

Query: 175 GEFHEIHKAFNAQSHPHLNI 234
           G+FHE+HKAF+     H+NI
Sbjct: 141 GQFHEVHKAFSFHGLHHINI 160


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