BLASTX nr result

ID: Glycyrrhiza23_contig00024755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024755
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-...   364   5e-99
ref|XP_003524311.1| PREDICTED: DNA excision repair protein ERCC-...   362   3e-98
ref|XP_002516323.1| ATP binding protein, putative [Ricinus commu...   354   7e-96
ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-...   352   3e-95
ref|XP_003630305.1| DNA excision repair protein ERCC-6-like prot...   345   2e-93

>ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
          Length = 1030

 Score =  364 bits (935), Expect = 5e-99
 Identities = 173/191 (90%), Positives = 183/191 (95%)
 Frame = -2

Query: 574 GPKSMYKLPGKIAKMLYPHQRDGLKWLWSLHCLGKGGILGDDMGLGKTMQMCGFLAGLFH 395
           GP+S YKL  KIAKMLYPHQR+GLKWLWSLHCLGKGGILGDDMGLGKTMQMCGFLAGLFH
Sbjct: 311 GPRSTYKLQAKIAKMLYPHQREGLKWLWSLHCLGKGGILGDDMGLGKTMQMCGFLAGLFH 370

Query: 394 SRLIRRAMVVAPKTLLPHWIKELSAVGLSEKTREYFGTSTKAREYELQYILQDKGVLLTT 215
           SRLIRR ++VAPKTLLPHWIKELSAVGLSEKTREYFGTSTK REYELQYILQD GVLLTT
Sbjct: 371 SRLIRRVLIVAPKTLLPHWIKELSAVGLSEKTREYFGTSTKLREYELQYILQDNGVLLTT 430

Query: 214 YDIVRNNSKSLRGNNYYDDEESDDGARWDYMILDEGHLIKNPSTQRAKSLLEIPCAHRII 35
           YDIVRNNSKSL+GNNY+DDE++++GA WDYMILDEGHLIKNPSTQRAKSLLEIP AHRII
Sbjct: 431 YDIVRNNSKSLQGNNYFDDEDNEEGATWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRII 490

Query: 34  ISGTPLQNNLK 2
           ISGTPLQNNLK
Sbjct: 491 ISGTPLQNNLK 501


>ref|XP_003524311.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
          Length = 938

 Score =  362 bits (928), Expect = 3e-98
 Identities = 172/193 (89%), Positives = 183/193 (94%)
 Frame = -2

Query: 580 LNGPKSMYKLPGKIAKMLYPHQRDGLKWLWSLHCLGKGGILGDDMGLGKTMQMCGFLAGL 401
           L GP+S YKL  +IA MLYPHQR+GLKWLWSLHCLGKGGILGDDMGLGKTMQMCGFLAGL
Sbjct: 244 LTGPRSTYKLQARIANMLYPHQREGLKWLWSLHCLGKGGILGDDMGLGKTMQMCGFLAGL 303

Query: 400 FHSRLIRRAMVVAPKTLLPHWIKELSAVGLSEKTREYFGTSTKAREYELQYILQDKGVLL 221
           FHSRLIRRA++VAPKTLLPHWIKELSAVGLSEKTREYFGTSTK REYELQYILQDKGVLL
Sbjct: 304 FHSRLIRRALIVAPKTLLPHWIKELSAVGLSEKTREYFGTSTKLREYELQYILQDKGVLL 363

Query: 220 TTYDIVRNNSKSLRGNNYYDDEESDDGARWDYMILDEGHLIKNPSTQRAKSLLEIPCAHR 41
           TTYDIVRNNSKSL+GNNY+DDE++++G  WDYMILDEGHLIKNPSTQRAKSLLEIP AH 
Sbjct: 364 TTYDIVRNNSKSLQGNNYFDDEDNEEGVTWDYMILDEGHLIKNPSTQRAKSLLEIPSAHC 423

Query: 40  IIISGTPLQNNLK 2
           IIISGTPLQNNLK
Sbjct: 424 IIISGTPLQNNLK 436


>ref|XP_002516323.1| ATP binding protein, putative [Ricinus communis]
           gi|223544553|gb|EEF46070.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1109

 Score =  354 bits (908), Expect = 7e-96
 Identities = 168/193 (87%), Positives = 183/193 (94%)
 Frame = -2

Query: 580 LNGPKSMYKLPGKIAKMLYPHQRDGLKWLWSLHCLGKGGILGDDMGLGKTMQMCGFLAGL 401
           L+GP+S ++LP KIA MLYPHQRDGLKWLWSLHCLGKGGILGDDMGLGKTMQ+CGFLAGL
Sbjct: 384 LSGPRSTFELPSKIATMLYPHQRDGLKWLWSLHCLGKGGILGDDMGLGKTMQICGFLAGL 443

Query: 400 FHSRLIRRAMVVAPKTLLPHWIKELSAVGLSEKTREYFGTSTKAREYELQYILQDKGVLL 221
           FHSRLI+RA+VVAPKTLL HWIKEL+AVGLS KTREYFGTS KAR+YELQYILQDKG+LL
Sbjct: 444 FHSRLIKRALVVAPKTLLAHWIKELAAVGLSRKTREYFGTSLKARQYELQYILQDKGILL 503

Query: 220 TTYDIVRNNSKSLRGNNYYDDEESDDGARWDYMILDEGHLIKNPSTQRAKSLLEIPCAHR 41
           TTYDIVRNNSKSLRG++Y+ DEES+DG  WDYMILDEGHLIKNPSTQRAKSLLEIP AHR
Sbjct: 504 TTYDIVRNNSKSLRGDDYFADEESEDGYTWDYMILDEGHLIKNPSTQRAKSLLEIPSAHR 563

Query: 40  IIISGTPLQNNLK 2
           IIISGTP+QNNLK
Sbjct: 564 IIISGTPIQNNLK 576


>ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
           gi|296088517|emb|CBI37508.3| unnamed protein product
           [Vitis vinifera]
          Length = 1043

 Score =  352 bits (903), Expect = 3e-95
 Identities = 165/193 (85%), Positives = 180/193 (93%)
 Frame = -2

Query: 580 LNGPKSMYKLPGKIAKMLYPHQRDGLKWLWSLHCLGKGGILGDDMGLGKTMQMCGFLAGL 401
           L+GP+S YKLPGKIAKMLYPHQRDGLKWLWSLHC GKGGILGDDMGLGKTMQ+CGFLAGL
Sbjct: 313 LSGPRSTYKLPGKIAKMLYPHQRDGLKWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGL 372

Query: 400 FHSRLIRRAMVVAPKTLLPHWIKELSAVGLSEKTREYFGTSTKAREYELQYILQDKGVLL 221
           FHS L+RRA+VVAPKTLL HWIKELSAVGLSEKTREY+GT TK R+YELQY+LQDKGVLL
Sbjct: 373 FHSCLLRRAVVVAPKTLLSHWIKELSAVGLSEKTREYYGTCTKTRQYELQYVLQDKGVLL 432

Query: 220 TTYDIVRNNSKSLRGNNYYDDEESDDGARWDYMILDEGHLIKNPSTQRAKSLLEIPCAHR 41
           TTYDIVRNNSKSL G NY+ D+ S+D   WDYMILDEGHLIKNPSTQRAKSL+EIPCAHR
Sbjct: 433 TTYDIVRNNSKSLCGGNYFHDKRSEDDFTWDYMILDEGHLIKNPSTQRAKSLMEIPCAHR 492

Query: 40  IIISGTPLQNNLK 2
           I++SGTP+QNNLK
Sbjct: 493 IVVSGTPIQNNLK 505


>ref|XP_003630305.1| DNA excision repair protein ERCC-6-like protein [Medicago
           truncatula] gi|355524327|gb|AET04781.1| DNA excision
           repair protein ERCC-6-like protein [Medicago truncatula]
          Length = 1129

 Score =  345 bits (886), Expect = 2e-93
 Identities = 165/193 (85%), Positives = 177/193 (91%)
 Frame = -2

Query: 580 LNGPKSMYKLPGKIAKMLYPHQRDGLKWLWSLHCLGKGGILGDDMGLGKTMQMCGFLAGL 401
           LN P+S YKL  KIAKMLYPHQR+GLKWLWSLH  GKGGILGDDMGLGKTMQ+CGFLAGL
Sbjct: 368 LNDPRSTYKLQPKIAKMLYPHQREGLKWLWSLHVRGKGGILGDDMGLGKTMQICGFLAGL 427

Query: 400 FHSRLIRRAMVVAPKTLLPHWIKELSAVGLSEKTREYFGTSTKAREYELQYILQDKGVLL 221
           FHSRLIRR +VVAPKTLLPHWIKELS VGLSEKT+EYFG   K REYELQYILQDKGVLL
Sbjct: 428 FHSRLIRRVLVVAPKTLLPHWIKELSVVGLSEKTKEYFGACAKLREYELQYILQDKGVLL 487

Query: 220 TTYDIVRNNSKSLRGNNYYDDEESDDGARWDYMILDEGHLIKNPSTQRAKSLLEIPCAHR 41
           TTYDIVRNN+KSL+G+ Y+DDE+++DG  WDYMILDEGHLIKNPSTQRAKSLLEIP AHR
Sbjct: 488 TTYDIVRNNTKSLKGHRYFDDEDNEDGPTWDYMILDEGHLIKNPSTQRAKSLLEIPSAHR 547

Query: 40  IIISGTPLQNNLK 2
           IIISGTPLQNNLK
Sbjct: 548 IIISGTPLQNNLK 560


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