BLASTX nr result

ID: Glycyrrhiza23_contig00024728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024728
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546921.1| PREDICTED: F-box/LRR-repeat protein 14-like ...   192   2e-47
ref|XP_003543698.1| PREDICTED: F-box/LRR-repeat protein 14-like ...   184   8e-45
ref|XP_002530448.1| ubiquitin-protein ligase, putative [Ricinus ...   161   6e-38
ref|XP_002323765.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_004135871.1| PREDICTED: F-box/LRR-repeat protein 14-like ...   154   5e-36

>ref|XP_003546921.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
          Length = 492

 Score =  192 bits (488), Expect = 2e-47
 Identities = 95/126 (75%), Positives = 101/126 (80%)
 Frame = +3

Query: 39  IQLPRWRGE*LMDNIPEHIVWEILSRIKKTSDRNSVSLACKRLYNLDNAQRHSLKVGCGM 218
           I + + RGE  MDNIPEHIVWEILSR+KKTSDRNSVSL CKRLY LDNAQR  ++VGCGM
Sbjct: 15  IHVVKSRGEKRMDNIPEHIVWEILSRLKKTSDRNSVSLVCKRLYYLDNAQRTFVRVGCGM 74

Query: 219 DPADEALTCLCTRFLNLSKVEITYSGWMSXXXXXXXXXXXXXXANHCPLLSDLALSYCTF 398
           DPADEALTCLCTRF NLSKVEITYSGWMS              ANHCPLL DL+LSYCTF
Sbjct: 75  DPADEALTCLCTRFQNLSKVEITYSGWMSKLGKQLDDKGLLILANHCPLLCDLSLSYCTF 134

Query: 399 ITDVGL 416
           ITDVGL
Sbjct: 135 ITDVGL 140


>ref|XP_003543698.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
          Length = 449

 Score =  184 bits (466), Expect = 8e-45
 Identities = 88/115 (76%), Positives = 95/115 (82%)
 Frame = +3

Query: 72  MDNIPEHIVWEILSRIKKTSDRNSVSLACKRLYNLDNAQRHSLKVGCGMDPADEALTCLC 251
           MDNIPEHIVWEILSRIKKTSDRN+VSL CKRLY LDNA+R+ ++VGCGMDPADEAL+CLC
Sbjct: 1   MDNIPEHIVWEILSRIKKTSDRNAVSLVCKRLYYLDNAERNCIRVGCGMDPADEALSCLC 60

Query: 252 TRFLNLSKVEITYSGWMSXXXXXXXXXXXXXXANHCPLLSDLALSYCTFITDVGL 416
            RF NLSKVEITYSGWMS              ANHCPLL DL+LSYCTFITDVGL
Sbjct: 61  IRFENLSKVEITYSGWMSKLGKQLDDKGLLILANHCPLLCDLSLSYCTFITDVGL 115


>ref|XP_002530448.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223529993|gb|EEF31918.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 443

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/115 (66%), Positives = 88/115 (76%)
 Frame = +3

Query: 72  MDNIPEHIVWEILSRIKKTSDRNSVSLACKRLYNLDNAQRHSLKVGCGMDPADEALTCLC 251
           MD++P+ +VWEI SR+KKT DRN+ SLACKRLY LDN QR SL+VGCG+ PA++ALT LC
Sbjct: 1   MDDLPDQLVWEIFSRVKKTIDRNAASLACKRLYELDNEQRQSLRVGCGLHPANQALTSLC 60

Query: 252 TRFLNLSKVEITYSGWMSXXXXXXXXXXXXXXANHCPLLSDLALSYCTFITDVGL 416
            RF NL KVEITYSGWMS              AN+CP LSDLALSYCTFITDVGL
Sbjct: 61  NRFPNLVKVEITYSGWMSKLGKQLDDQGLLLLANNCPSLSDLALSYCTFITDVGL 115


>ref|XP_002323765.1| predicted protein [Populus trichocarpa] gi|222866767|gb|EEF03898.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score =  160 bits (404), Expect = 1e-37
 Identities = 73/115 (63%), Positives = 90/115 (78%)
 Frame = +3

Query: 72  MDNIPEHIVWEILSRIKKTSDRNSVSLACKRLYNLDNAQRHSLKVGCGMDPADEALTCLC 251
           MD++P+ +VW+ILSR+KKT D+NS SLACKR+Y LDN QR S++VGCG+DPA++ALT LC
Sbjct: 1   MDDLPDQLVWDILSRVKKTVDKNSASLACKRIYELDNEQRQSMRVGCGLDPANQALTSLC 60

Query: 252 TRFLNLSKVEITYSGWMSXXXXXXXXXXXXXXANHCPLLSDLALSYCTFITDVGL 416
            RF NL+KVEITY+GWMS              AN+CP L+DL LSYCTFITDVGL
Sbjct: 61  NRFPNLAKVEITYAGWMSKLGKQLDDQGLVILANNCPSLTDLTLSYCTFITDVGL 115


>ref|XP_004135871.1| PREDICTED: F-box/LRR-repeat protein 14-like [Cucumis sativus]
           gi|449491060|ref|XP_004158787.1| PREDICTED:
           F-box/LRR-repeat protein 14-like [Cucumis sativus]
          Length = 481

 Score =  154 bits (390), Expect = 5e-36
 Identities = 71/115 (61%), Positives = 87/115 (75%)
 Frame = +3

Query: 72  MDNIPEHIVWEILSRIKKTSDRNSVSLACKRLYNLDNAQRHSLKVGCGMDPADEALTCLC 251
           MD++PE ++WEIL+R+KKT DRNS++L+CKRL+ LD   R  L+VGCG+DPADEALT LC
Sbjct: 15  MDSLPEVLIWEILNRVKKTVDRNSLALSCKRLHRLDKENRQFLRVGCGLDPADEALTSLC 74

Query: 252 TRFLNLSKVEITYSGWMSXXXXXXXXXXXXXXANHCPLLSDLALSYCTFITDVGL 416
            RF NL ++EITYSGWMS              +NHCP L+DL LSYCTFITDVGL
Sbjct: 75  LRFPNLVRIEITYSGWMSKLGKQLDDRGLFILSNHCPSLTDLTLSYCTFITDVGL 129


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