BLASTX nr result

ID: Glycyrrhiza23_contig00024705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024705
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3...   121   7e-26
ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3...   114   8e-24
ref|XP_002315634.1| multidrug resistance protein ABC transporter...    80   2e-13
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...    75   4e-12
emb|CBI27547.3| unnamed protein product [Vitis vinifera]               68   7e-10

>ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1452

 Score =  121 bits (303), Expect = 7e-26
 Identities = 65/104 (62%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
 Frame = -3

Query: 405 IGFTLYESKRIITGYNSVSLALTWVLATLVSLYSTKRIFKEKNR-GWPLVLILWWVFATI 229
           + F  Y S++II G+NSVSLALTWVLAT+VS YS +   +E  R G+PLVLILWWVFA  
Sbjct: 67  LAFYQYSSRKII-GFNSVSLALTWVLATIVSFYSMRTKVRENKRFGFPLVLILWWVFACS 125

Query: 228 SDAISVFLKLTKDLKSLRLSFFLSEDNIVDVFSFPLLLLLCFNV 97
            DAI + LKL K  +S+ L FFLSEDN+VD  S PLL+LLCFNV
Sbjct: 126 IDAILLSLKLVKGFESIDLWFFLSEDNVVDSVSLPLLVLLCFNV 169


>ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1454

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/104 (58%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
 Frame = -3

Query: 405 IGFTLYESKRIITGYNSVSLALTWVLATLVSLYSTKRIFKEKNR-GWPLVLILWWVFATI 229
           + F  Y S+RII G+NSVSL LTWVLAT+VS YS +   +E  R  +PLVLILWW FA I
Sbjct: 70  LAFYQYSSRRII-GFNSVSLVLTWVLATIVSFYSMRTKVRENKRFRFPLVLILWWFFACI 128

Query: 228 SDAISVFLKLTKDLKSLRLSFFLSEDNIVDVFSFPLLLLLCFNV 97
            DA+ +  KL K  +S+ L FFLS+DN+VD  S PLL+LLCFNV
Sbjct: 129 IDALLLSSKLVKKFESINLWFFLSKDNVVDSVSLPLLVLLCFNV 172


>ref|XP_002315634.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222864674|gb|EEF01805.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 342

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 45/106 (42%), Positives = 61/106 (57%)
 Frame = -3

Query: 411 LNIGFTLYESKRIITGYNSVSLALTWVLATLVSLYSTKRIFKEKNRGWPLVLILWWVFAT 232
           L  GF  Y    I+T   SV L++TW+LATLV+ YS  R  +E NR WP+V+ILWWV  +
Sbjct: 74  LGFGFYQYWDLGIVTS-KSVFLSVTWILATLVACYSKNRTLRENNR-WPVVVILWWVVYS 131

Query: 231 ISDAISVFLKLTKDLKSLRLSFFLSEDNIVDVFSFPLLLLLCFNVV 94
           I  ++SV +       S+ L +   E NI D  S PL +LL  N +
Sbjct: 132 IFCSLSVSIHFITRFSSIELPYSWPEANIADFPSLPLSILLSLNAL 177


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223546054|gb|EEF47557.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 43/102 (42%), Positives = 59/102 (57%)
 Frame = -3

Query: 411 LNIGFTLYESKRIITGYNSVSLALTWVLATLVSLYSTKRIFKEKNRGWPLVLILWWVFAT 232
           L  GF  Y  +R I        ++TW+LAT+V  YS +R  +E N+ WPLVLILWWVF+ 
Sbjct: 81  LGFGFREYLDRRDIN-----CKSITWILATVVVFYSQQRNVREGNK-WPLVLILWWVFSC 134

Query: 231 ISDAISVFLKLTKDLKSLRLSFFLSEDNIVDVFSFPLLLLLC 106
           I  + SV +       S++L   L + NIV+  SFP  +LLC
Sbjct: 135 IMYSASVSIYFITHFSSIQLPNPLPKPNIVEFISFPFSILLC 176


>emb|CBI27547.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 7/112 (6%)
 Frame = -3

Query: 408 NIGFTLYESKRIITGYNSVSL--ALTWVLATLVSLYSTKRIFKEKNRGWPLVLILWWVFA 235
           ++GF LYE   + T  N V +  A+TWVLA ++++   +     +N+ WPL+L  WWVF+
Sbjct: 63  HLGFCLYEFWSLET-INLVHIFSAMTWVLAAIITVSCFRNSTTRENKRWPLILTSWWVFS 121

Query: 234 TISDAISVFLKLTKDLKSLRLSFFLSE---DNIVDVFS--FPLLLLLCFNVV 94
           +I  ++SV + L   LK L L  F  +      +D F+   PL +LLCFNV+
Sbjct: 122 SILSSLSVSVYLVTRLKILTLPDFWPDFVPQATIDDFASLIPLWILLCFNVL 173


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