BLASTX nr result

ID: Glycyrrhiza23_contig00024703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024703
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36624.1| unknown [Medicago truncatula]                          110   2e-22
ref|XP_003542768.1| PREDICTED: uncharacterized protein LOC100791...   107   1e-21
ref|NP_001236615.1| Dof6 transcription factor [Glycine max] gi|1...   105   3e-21
ref|XP_003545886.1| PREDICTED: dof zinc finger protein DOF5.3-li...   103   1e-20
ref|NP_001237914.1| Dof25 [Glycine max] gi|112363406|gb|ABI16027...   103   1e-20

>gb|AFK36624.1| unknown [Medicago truncatula]
          Length = 298

 Score =  110 bits (274), Expect = 2e-22
 Identities = 71/148 (47%), Positives = 86/148 (58%), Gaps = 9/148 (6%)
 Frame = -1

Query: 422 CKRHWTKGGTLRNVPVGGGRKNKRVIK---KXXXXXXXXXXNGNINMDVSELGAHMTIQT 252
           CKRHWTKGGTLRNVPVGGGRKNKR+ K              +      ++ + ++M IQT
Sbjct: 80  CKRHWTKGGTLRNVPVGGGRKNKRIKKPTTPVTSSTTITTTSTTCTTSITNMNSNMAIQT 139

Query: 251 PHQRSQNLSAVGDQKNTPLPSSLYQSLIHHPPPLVPQQNLMSNXXXXXXXXXXXGIG--- 81
           P Q       VGD K+  +PSSLYQ+LI HPP L+ QQN+M+N           G G   
Sbjct: 140 PLQ-------VGDHKS--IPSSLYQALI-HPPSLLLQQNMMNNLSENKDFGIGNGNGNVN 189

Query: 80  -NGIF--LSSAVPFPQQNQTPLFPFSTS 6
            NG+F   SS +  P QNQT LFPFSTS
Sbjct: 190 VNGMFTSTSSTLHLPHQNQTMLFPFSTS 217


>ref|XP_003542768.1| PREDICTED: uncharacterized protein LOC100791855 [Glycine max]
          Length = 336

 Score =  107 bits (267), Expect = 1e-21
 Identities = 77/165 (46%), Positives = 86/165 (52%), Gaps = 26/165 (15%)
 Frame = -1

Query: 422 CKRHWTKGGTLRNVPVGGGRKNKRVIKK--------------------XXXXXXXXXXNG 303
           CKRHWTKGGTLRNVPVGGGRKNKRV K                               N 
Sbjct: 81  CKRHWTKGGTLRNVPVGGGRKNKRVRKSITTPITTSSTTTSITTTTSTCTATVTTSIGNN 140

Query: 302 NINMD-VSELGAHMTIQTPHQRSQNLSAVGDQKNTPLPSSLYQSLIHHPPPLVPQQNLMS 126
           N NMD +    +HMTIQTP           D KN  + SSLYQ+LI  PP L+ QQNLM+
Sbjct: 141 NNNMDAMLGCNSHMTIQTP--------LADDHKN--MSSSLYQALIRPPPLLLQQQNLMN 190

Query: 125 NXXXXXXXXXXXGIG---NGIFLSSAVPFP--QQNQTPLFPFSTS 6
           N           GIG   NGIF S  +PFP   Q+Q+ LFPFSTS
Sbjct: 191 NTRDLEGKDFGIGIGNGNNGIFPSLTLPFPIHHQSQSLLFPFSTS 235


>ref|NP_001236615.1| Dof6 transcription factor [Glycine max] gi|146674816|gb|ABQ42347.1|
           Dof6 transcription factor [Glycine max]
          Length = 291

 Score =  105 bits (263), Expect = 3e-21
 Identities = 76/146 (52%), Positives = 82/146 (56%), Gaps = 7/146 (4%)
 Frame = -1

Query: 422 CKRHWTKGGTLRNVPVGGGRKNKRVIKK-------XXXXXXXXXXNGNINMDVSELGAHM 264
           CKRHWTKGGTLRNVPVGGGRKNKRV K                    N NMD  EL   +
Sbjct: 76  CKRHWTKGGTLRNVPVGGGRKNKRVKKSTTPNTATATNSISTTTTTSNTNMD-GELNTPI 134

Query: 263 TIQTPHQRSQNLSAVGDQKNTPLPSSLYQSLIHHPPPLVPQQNLMSNXXXXXXXXXXXGI 84
           TI         L AV D K T  PSSLYQSL       +PQQNLM +           GI
Sbjct: 135 TIP--------LFAVDDHKTT--PSSLYQSL------CLPQQNLMVS-TKDSEEGKDFGI 177

Query: 83  GNGIFLSSAVPFPQQNQTPLFPFSTS 6
           GNGIFLSS VPFP Q+Q+ LFPF+TS
Sbjct: 178 GNGIFLSSTVPFP-QSQSLLFPFTTS 202


>ref|XP_003545886.1| PREDICTED: dof zinc finger protein DOF5.3-like [Glycine max]
          Length = 285

 Score =  103 bits (258), Expect = 1e-20
 Identities = 74/142 (52%), Positives = 81/142 (57%), Gaps = 3/142 (2%)
 Frame = -1

Query: 422 CKRHWTKGGTLRNVPVGGGRKNKRVIKK---XXXXXXXXXXNGNINMDVSELGAHMTIQT 252
           CKRHWTKGGTLRNVPVGGGRKNKRV K                N NMD  EL   +TI +
Sbjct: 75  CKRHWTKGGTLRNVPVGGGRKNKRVKKSTTPAIATTSISTSTSNANMD-GELNNPITIPS 133

Query: 251 PHQRSQNLSAVGDQKNTPLPSSLYQSLIHHPPPLVPQQNLMSNXXXXXXXXXXXGIGNGI 72
                    AV D K T  PSSLYQ +       +PQQNLMS            GIGNGI
Sbjct: 134 --------LAVDDHKTT--PSSLYQYV------CLPQQNLMST--KDSEEGKDFGIGNGI 175

Query: 71  FLSSAVPFPQQNQTPLFPFSTS 6
           FLSS VPFP Q+Q+ LFPF+TS
Sbjct: 176 FLSSTVPFP-QSQSLLFPFTTS 196


>ref|NP_001237914.1| Dof25 [Glycine max] gi|112363406|gb|ABI16027.1| Dof25 [Glycine max]
          Length = 253

 Score =  103 bits (258), Expect = 1e-20
 Identities = 74/142 (52%), Positives = 81/142 (57%), Gaps = 3/142 (2%)
 Frame = -1

Query: 422 CKRHWTKGGTLRNVPVGGGRKNKRVIKK---XXXXXXXXXXNGNINMDVSELGAHMTIQT 252
           CKRHWTKGGTLRNVPVGGGRKNKRV K                N NMD  EL   +TI +
Sbjct: 43  CKRHWTKGGTLRNVPVGGGRKNKRVKKSTTPAIATTSISTSTSNANMD-GELNNPITIPS 101

Query: 251 PHQRSQNLSAVGDQKNTPLPSSLYQSLIHHPPPLVPQQNLMSNXXXXXXXXXXXGIGNGI 72
                    AV D K T  PSSLYQ +       +PQQNLMS            GIGNGI
Sbjct: 102 --------LAVDDHKTT--PSSLYQYV------CLPQQNLMST--KDSEEGKDFGIGNGI 143

Query: 71  FLSSAVPFPQQNQTPLFPFSTS 6
           FLSS VPFP Q+Q+ LFPF+TS
Sbjct: 144 FLSSTVPFP-QSQSLLFPFTTS 164


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