BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024688
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551782.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   392   e-107
ref|XP_003530460.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   383   e-104
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...   369   e-100
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...   369   e-100
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...   368   e-100

>ref|XP_003551782.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Glycine max]
          Length = 992

 Score =  392 bits (1008), Expect = e-107
 Identities = 186/209 (88%), Positives = 193/209 (92%)
 Frame = -1

Query: 629  VIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVRQQREAVKRAPRKQLEPVFEALDTL 450
            VIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVRQQREAVKRAPRKQLEPVFEALDTL
Sbjct: 417  VIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVRQQREAVKRAPRKQLEPVFEALDTL 476

Query: 449  GHTKWRINKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDETXXXXXXXXXXXXXK 270
            GHTKWR+NKKVLSVVDRIWASGGR+ADLVDRDDVPLP+EPDTDDE              K
Sbjct: 477  GHTKWRVNKKVLSVVDRIWASGGRIADLVDRDDVPLPDEPDTDDEAKIKKWKWKYKSLQK 536

Query: 269  ENRERYSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILE 90
            ENRERYSQRCDIELKL+VARKMKDEEGFYYPHN+DFRGRAYPMHPHLNHLGSD+CRGILE
Sbjct: 537  ENRERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 596

Query: 89   FADGRPLGKSGLHWLKIHLANLYAGGVDK 3
            FA+GR LGKSGL WLKIHLANLYAGGVDK
Sbjct: 597  FAEGRSLGKSGLRWLKIHLANLYAGGVDK 625


>ref|XP_003530460.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Glycine max]
          Length = 1015

 Score =  383 bits (983), Expect = e-104
 Identities = 182/209 (87%), Positives = 191/209 (91%)
 Frame = -1

Query: 629  VIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVRQQREAVKRAPRKQLEPVFEALDTL 450
            VIPYMPMLVPPVNW+GYDKGGHLFLPSYVMRTHG RQQREAVKRAPRKQLEPVFEALDTL
Sbjct: 440  VIPYMPMLVPPVNWSGYDKGGHLFLPSYVMRTHGARQQREAVKRAPRKQLEPVFEALDTL 499

Query: 449  GHTKWRINKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDETXXXXXXXXXXXXXK 270
            GHTKWR+NKKVLSVVDRIWASGGR+ADLVDRDDVPLP++P TDDE              K
Sbjct: 500  GHTKWRVNKKVLSVVDRIWASGGRIADLVDRDDVPLPDKPVTDDEEKIKKWKWKCKSLQK 559

Query: 269  ENRERYSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILE 90
            ENRERYSQRCDIELKL+VARKMKDEEGFYYPHN+DFRGRAYPMHPHLNHLGSD+CRGILE
Sbjct: 560  ENRERYSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILE 619

Query: 89   FADGRPLGKSGLHWLKIHLANLYAGGVDK 3
            FA+GR LGKSGL WLKIHLANLYAGGVDK
Sbjct: 620  FAEGRFLGKSGLQWLKIHLANLYAGGVDK 648


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
            AltName: Full=T7 bacteriophage-type single subunit RNA
            polymerase 2; Flags: Precursor
            gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score =  369 bits (948), Expect = e-100
 Identities = 173/209 (82%), Positives = 187/209 (89%)
 Frame = -1

Query: 629  VIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVRQQREAVKRAPRKQLEPVFEALDTL 450
            VIPYMPMLVPPV WTGYDKGGHL+LPSYVMRTHG RQQREAVKRA R QL+PVFEALDTL
Sbjct: 445  VIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTL 504

Query: 449  GHTKWRINKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDETXXXXXXXXXXXXXK 270
            G+TKWRINK+VLSVVDRIWA GGRLADLVDRDD PLPEEPDT+DE              K
Sbjct: 505  GNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKK 564

Query: 269  ENRERYSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILE 90
            ENRER+SQRCDIELKL+VARKMKDEE F+YPHNVDFRGRAYPMHPHLNHLGSD+CRG+LE
Sbjct: 565  ENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLE 624

Query: 89   FADGRPLGKSGLHWLKIHLANLYAGGVDK 3
            FA+GRPLG+SGL WLKIHLANL+AGGV+K
Sbjct: 625  FAEGRPLGESGLRWLKIHLANLFAGGVEK 653


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris] gi|17221595|dbj|BAB78465.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score =  369 bits (948), Expect = e-100
 Identities = 173/209 (82%), Positives = 187/209 (89%)
 Frame = -1

Query: 629  VIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVRQQREAVKRAPRKQLEPVFEALDTL 450
            VIPYMPMLVPPV WTGYDKGGHL+LPSYVMRTHG RQQREAVKRA R QL+PVFEALDTL
Sbjct: 445  VIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTL 504

Query: 449  GHTKWRINKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDETXXXXXXXXXXXXXK 270
            G+TKWRINK+VLSVVDRIWA GGRLADLVDRDD PLPEEPDT+DE              K
Sbjct: 505  GNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALLPKWRWKVKSVKK 564

Query: 269  ENRERYSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILE 90
            ENRER+SQRCDIELKL+VARKMKDEE F+YPHNVDFRGRAYPMHPHLNHLGSD+CRG+LE
Sbjct: 565  ENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLE 624

Query: 89   FADGRPLGKSGLHWLKIHLANLYAGGVDK 3
            FA+GRPLG+SGL WLKIHLANL+AGGV+K
Sbjct: 625  FAEGRPLGESGLRWLKIHLANLFAGGVEK 653


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial; AltName:
            Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 2B; Flags: Precursor
            gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
            RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score =  368 bits (944), Expect = e-100
 Identities = 172/209 (82%), Positives = 186/209 (88%)
 Frame = -1

Query: 629  VIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVRQQREAVKRAPRKQLEPVFEALDTL 450
            VIPYMPMLVPPV WTGYDKGGHL+LPSYVMRTHG RQQREAVKRA R QL+PVFEALDTL
Sbjct: 446  VIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTL 505

Query: 449  GHTKWRINKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDETXXXXXXXXXXXXXK 270
            G TKWRINK+VLSV+DRIWA GGRLADLVDRDD PLPEEPDT+DE              K
Sbjct: 506  GSTKWRINKRVLSVIDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKK 565

Query: 269  ENRERYSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILE 90
            ENRER+SQRCDIELKL+VARKMKDEEGF+YPHNVDFRGRAYPMHPHLNHLGSD+CRG+L 
Sbjct: 566  ENRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLV 625

Query: 89   FADGRPLGKSGLHWLKIHLANLYAGGVDK 3
            FA+GRPLG+SGL WLKIHLANL+AGGV+K
Sbjct: 626  FAEGRPLGESGLRWLKIHLANLFAGGVEK 654