BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024658
         (1082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...   167   3e-39
dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ...   165   2e-38
gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...   158   3e-36
gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thali...   150   5e-34
gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thali...   150   5e-34

>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score =  167 bits (424), Expect = 3e-39
 Identities = 104/328 (31%), Positives = 157/328 (47%)
 Frame = -1

Query: 1079 KLWRWPGPKRYRILLWKVCLEALVTNSWRKRRNLDDTGFCPMCGLEEESVIHLIRDCPSM 900
            ++W+   P+R R+ +W V    ++TN  R RR+L +   C +C   EE+++H++RDCP+M
Sbjct: 905  RIWKLITPERVRVFIWLVSQNVIMTNVERVRRHLSENAICSVCNGAEETILHVLRDCPAM 964

Query: 899  QQVWVCLKGISSLSDPFFSQPLLIWVETNIGGIQNDGSWPTLFGTAVYLAWQTRNELVFQ 720
            + +W  L  +    + FFSQ LL W+ TN+  ++  G WPTLFG  ++ AW+ R   VF 
Sbjct: 965  EPIWRRLLPLRRHHE-FFSQSLLEWLFTNMDPVK--GIWPTLFGMGIWWAWKWRCCDVFG 1021

Query: 719  QK*TTVTQLVFRIKSMASNIEDSIRENKRNSSRGISYSGGRHPQWTCPDQGWYKLNCDGT 540
            ++     +L F IK MA  +         N   G+     R  +W  P  GW K+  DG 
Sbjct: 1022 ERKICRDRLKF-IKDMAEEVRRVHVGAVGNRPNGVRVE--RMIRWQVPSDGWVKITTDGA 1078

Query: 539  VSXXXXXXXXXGVVRSDMGTFLFGFAGRLNPSSVIEAELWAILKCLKLARERGLGRIHVE 360
                       G +R+  G +L GFA  +   +   AELW     L +A ++G  R+ ++
Sbjct: 1079 SRGNHGLAAAGGAIRNGQGEWLGGFALNIGSCAAPLAELWGAYYGLLIAWDKGFRRVELD 1138

Query: 359  TDSLAAVRLIHMDCSPLHPSFNLVREITALMDPTENFRICHVMREENHVADGLAKHSLSL 180
             D    V  +    S  HP   LVR            R+ HV RE N +ADGLA ++ +L
Sbjct: 1139 LDCKLVVGFLSTGVSNAHPLSFLVRLCQGFFTRDWLVRVSHVYREANRLADGLANYAFTL 1198

Query: 179  ESSFVTFDNLPLFLSTAFWADFNGVLLP 96
                  FD  P  +     AD NG   P
Sbjct: 1199 PLGLHCFDACPEGVRLLLLADVNGTEFP 1226


>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 676

 Score =  165 bits (417), Expect = 2e-38
 Identities = 105/330 (31%), Positives = 160/330 (48%), Gaps = 2/330 (0%)
 Frame = -1

Query: 1079 KLWRWPGPKRYRILLWKVCLEALVTNSWRKRRNLDDTGFCPMCGLEEESVIHLIRDCPSM 900
            ++WR   P+R RI LW V  + ++TN+ R RR++ D+  CP+C    ES+IH++RDCP+M
Sbjct: 346  RVWRVMVPERARIFLWLVGNQVVLTNAERVRRHMADSDVCPLCKGASESLIHVLRDCPAM 405

Query: 899  QQVWVCLKGISSLSDPFFSQPLLIWVETNIGGIQNDG--SWPTLFGTAVYLAWQTRNELV 726
              +W+ +  +      FF   LL W+  N+    +    SWPTLF   V+  W+ R   V
Sbjct: 406  MGIWMRVVPVME-QRRFFETSLLEWMYGNLKERSDSERRSWPTLFALTVWWGWKWRCGYV 464

Query: 725  FQQK*TTVTQLVFRIKSMASNIEDSIRENKRNSSRGISYSGGRHPQWTCPDQGWYKLNCD 546
            F +      ++ F +KS  + +E +      ++   +     R   W  P +GW  +N D
Sbjct: 465  FGEDSRCRDRVKF-LKSAVAEVEAAHLAANGDAREDVLVE--RMIAWRKPAEGWVTMNTD 521

Query: 545  GTVSXXXXXXXXXGVVRSDMGTFLFGFAGRLNPSSVIEAELWAILKCLKLARERGLGRIH 366
            G            GV+R + G++L GFA  +   S   AELW +   L +A ERG  R+ 
Sbjct: 522  GASHGNPGQATAGGVIRDEHGSWLVGFALNIGVCSAPLAELWGVYYGLVVAWERGWRRVR 581

Query: 365  VETDSLAAVRLIHMDCSPLHPSFNLVREITALMDPTENFRICHVMREENHVADGLAKHSL 186
            +E DS   V  +       HP   LVR     +      RI HV RE N +ADGLA ++ 
Sbjct: 582  LEVDSALVVGFLQSGIGDSHPLAFLVRLCHGFISKDWIVRITHVYREANRLADGLANYAF 641

Query: 185  SLESSFVTFDNLPLFLSTAFWADFNGVLLP 96
            +L   F+  D+ P  +S+    D  G   P
Sbjct: 642  TLPFGFLLLDSCPEHVSSILLEDVMGTSFP 671


>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 321

 Score =  158 bits (399), Expect = 3e-36
 Identities = 105/321 (32%), Positives = 153/321 (47%)
 Frame = -1

Query: 1058 PKRYRILLWKVCLEALVTNSWRKRRNLDDTGFCPMCGLEEESVIHLIRDCPSMQQVWVCL 879
            P+R R+ LW V  + ++TN  R RR+L DT  C +C   EE+++H++RDCP+M  +W  L
Sbjct: 3    PERVRVFLWLVVQQVIITNVERYRRHLSDTRVCQICQGGEETILHVLRDCPAMAGIWSRL 62

Query: 878  KGISSLSDPFFSQPLLIWVETNIGGIQNDGSWPTLFGTAVYLAWQTRNELVFQQK*TTVT 699
                 +   FF+  LL W+  N   ++  GSWPT+F  AV+  W+ R   +F        
Sbjct: 63   VPRDQIRQ-FFTASLLEWIYKN---LRERGSWPTVFVMAVWWGWKWRCGNIFGGNGKCRD 118

Query: 698  QLVFRIKSMASNIEDSIRENKRNSSRGISYSGGRHPQWTCPDQGWYKLNCDGTVSXXXXX 519
            ++ F IK +A  +  +    K N  R       R   W  P+ GW KLN DG        
Sbjct: 119  RVKF-IKDLAEEVAIANAFVKGNEVRVSRVE--RLVSWVSPEDGWVKLNTDGASRGNPGF 175

Query: 518  XXXXGVVRSDMGTFLFGFAGRLNPSSVIEAELWAILKCLKLARERGLGRIHVETDSLAAV 339
                GV+R   G ++ GFA  +   S   AELW +   L +A  RG  R+ +E DS   V
Sbjct: 176  ATAGGVLRDHNGAWIGGFAVNIGVCSAPLAELWGVYYGLFIAWGRGARRVELEVDSKMVV 235

Query: 338  RLIHMDCSPLHPSFNLVREITALMDPTENFRICHVMREENHVADGLAKHSLSLESSFVTF 159
              +    +  HP   L+R     +      RI HV RE N +ADGLA ++ SL       
Sbjct: 236  GFLTTGIADSHPLSFLLRLCYDFLSKGWIVRISHVYREANRLADGLANYAFSLSLGLHLL 295

Query: 158  DNLPLFLSTAFWADFNGVLLP 96
            ++ P  +S+    D  GV  P
Sbjct: 296  ESRPDVVSSILLDDVAGVSYP 316


>gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thaliana]
          Length = 314

 Score =  150 bits (379), Expect = 5e-34
 Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 8/312 (2%)
 Frame = -1

Query: 1019 EALVTNSWRKRRNLDDTGFCPMCGLEEESVIHLIRDCPSMQQVWVCLKGISSLSDPFFSQ 840
            + L+TN+ R+RR+L D+  C +C   E+++IH++RDCP+M+ +W+ L       + FF+Q
Sbjct: 3    QVLMTNAERRRRHLSDSDICQICKGAEKTIIHILRDCPAMEGIWIRLVPAGKRRE-FFTQ 61

Query: 839  PLLIWVETNIGGIQN--DGSWPTLFGTAVYLAWQTRNELVFQQK*TTVTQLVFRIKSMAS 666
             LL W+  N+G  +   + +W TLF  +++ AW+ R   +F  +     ++ F       
Sbjct: 62   SLLEWLFANLGDRRKTCESTWSTLFALSIWWAWKWRCGNIFGVQDKCRDRVRF------- 114

Query: 665  NIEDSIRENKRNSSRGISYSGGRHPQ------WTCPDQGWYKLNCDGTVSXXXXXXXXXG 504
             ++D  RE         + SGG   +      W+ P++GW+KLN DG            G
Sbjct: 115  -LKDLARETSMAHVIVRTLSGGHGERVERLIAWSKPEEGWWKLNTDGASRGNPGLASAGG 173

Query: 503  VVRSDMGTFLFGFAGRLNPSSVIEAELWAILKCLKLARERGLGRIHVETDSLAAVRLIHM 324
            V+R + G +  GFA  +   S   AELW +   L +A ER + R+ +E DS   V  + +
Sbjct: 174  VLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAWERRVTRLEIEVDSEIVVGFLKI 233

Query: 323  DCSPLHPSFNLVREITALMDPTENFRICHVMREENHVADGLAKHSLSLESSFVTFDNLPL 144
              + +HP   LVR     +      RI HV RE N +ADGLA ++ SL   F +   +P 
Sbjct: 234  XINEVHPLSFLVRLCHDFISRDWRVRISHVYREANRLADGLANYAFSLPLGFHSLSLVPD 293

Query: 143  FLSTAFWADFNG 108
             L      D +G
Sbjct: 294  SLRFILLDDTSG 305


>gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197456|gb|AAM15081.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 314

 Score =  150 bits (379), Expect = 5e-34
 Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 8/312 (2%)
 Frame = -1

Query: 1019 EALVTNSWRKRRNLDDTGFCPMCGLEEESVIHLIRDCPSMQQVWVCLKGISSLSDPFFSQ 840
            + L+TN+ R+RR+L D+  C +C   E+++IH++RDCP+M+ +W+ L       + FF+Q
Sbjct: 3    QVLMTNAERRRRHLSDSDICQICKGAEKTIIHILRDCPAMEGIWIRLVPAGKRRE-FFTQ 61

Query: 839  PLLIWVETNIGGIQN--DGSWPTLFGTAVYLAWQTRNELVFQQK*TTVTQLVFRIKSMAS 666
             LL W+  N+G  +   + +W TLF  +++ AW+ R   +F  +     ++ F       
Sbjct: 62   SLLEWLFANLGDRRKTCESTWSTLFALSIWWAWKWRCGNIFGVQDKCRDRVRF------- 114

Query: 665  NIEDSIRENKRNSSRGISYSGGRHPQ------WTCPDQGWYKLNCDGTVSXXXXXXXXXG 504
             ++D  RE         + SGG   +      W+ P++GW+KLN DG            G
Sbjct: 115  -LKDLARETSMAHVIVRTLSGGHGERVERLIAWSKPEEGWWKLNTDGASRGNPGLASAGG 173

Query: 503  VVRSDMGTFLFGFAGRLNPSSVIEAELWAILKCLKLARERGLGRIHVETDSLAAVRLIHM 324
            V+R + G +  GFA  +   S   AELW +   L +A ER + R+ +E DS   V  + +
Sbjct: 174  VLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAWERRVTRLEIEVDSEIVVGFLKI 233

Query: 323  DCSPLHPSFNLVREITALMDPTENFRICHVMREENHVADGLAKHSLSLESSFVTFDNLPL 144
              + +HP   LVR     +      RI HV RE N +ADGLA ++ SL   F +   +P 
Sbjct: 234  GINEVHPLSFLVRLCHDFISRDWRVRISHVYREANRLADGLANYAFSLPLGFHSLSLVPD 293

Query: 143  FLSTAFWADFNG 108
             L      D +G
Sbjct: 294  SLRFILLDDTSG 305