BLASTX nr result

ID: Glycyrrhiza23_contig00024635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024635
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330819.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002332092.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002272004.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase...   104   6e-21
emb|CAN72072.1| hypothetical protein VITISV_008263 [Vitis vinifera]   104   8e-21
ref|XP_002264185.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase...   102   4e-20

>ref|XP_002330819.1| predicted protein [Populus trichocarpa] gi|222872621|gb|EEF09752.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score =  119 bits (298), Expect = 3e-25
 Identities = 50/86 (58%), Positives = 71/86 (82%)
 Frame = +2

Query: 2   RVQNIEQCLSRDYNIFCHYLRRTISNDFYEGIRAKVIDKDNKPKWEPSKLDLVNEELVDQ 181
           R+Q ++QCL+R+YNIFCH +RRT+S DF+EGIRAK +DKD  PKWEP++L+LV++E+V Q
Sbjct: 282 RMQALDQCLAREYNIFCHIMRRTVSIDFFEGIRAKFLDKDENPKWEPARLELVSDEMVGQ 341

Query: 182 FFSNVNDDEWESLQFPDRPYSQIVSR 259
           +FS V++D+WE+LQ P R  S  + R
Sbjct: 342 YFSRVDEDDWETLQLPARSSSVDIMR 367


>ref|XP_002332092.1| predicted protein [Populus trichocarpa] gi|222874912|gb|EEF12043.1|
           predicted protein [Populus trichocarpa]
          Length = 383

 Score =  106 bits (265), Expect = 2e-21
 Identities = 47/78 (60%), Positives = 61/78 (78%)
 Frame = +2

Query: 2   RVQNIEQCLSRDYNIFCHYLRRTISNDFYEGIRAKVIDKDNKPKWEPSKLDLVNEELVDQ 181
           R Q +EQCL ++  I CH LRRT+SNDFYEGIRA ++DKD  PKWEPSKL+LV +E+V +
Sbjct: 295 RKQGLEQCLIQECTIVCHILRRTVSNDFYEGIRAILLDKDKNPKWEPSKLELVTDEMVGR 354

Query: 182 FFSNVNDDEWESLQFPDR 235
           +FS V++D+ E LQ P R
Sbjct: 355 YFSRVDEDDMEPLQLPTR 372


>ref|XP_002272004.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase 1-like [Vitis
           vinifera]
          Length = 355

 Score =  104 bits (260), Expect = 6e-21
 Identities = 43/78 (55%), Positives = 60/78 (76%)
 Frame = +2

Query: 2   RVQNIEQCLSRDYNIFCHYLRRTISNDFYEGIRAKVIDKDNKPKWEPSKLDLVNEELVDQ 181
           R + ++ CL +DY I CH +RRT + DF EG RAK+ +KD +PKWEPSKL+LV++E+VDQ
Sbjct: 267 RTKELKDCLIQDYTIVCHLIRRTFNRDFIEGSRAKLFEKDKQPKWEPSKLELVSDEMVDQ 326

Query: 182 FFSNVNDDEWESLQFPDR 235
           +F  V+D +WE LQ P+R
Sbjct: 327 YFQKVDDADWEYLQLPER 344


>emb|CAN72072.1| hypothetical protein VITISV_008263 [Vitis vinifera]
          Length = 360

 Score =  104 bits (259), Expect = 8e-21
 Identities = 43/78 (55%), Positives = 60/78 (76%)
 Frame = +2

Query: 2   RVQNIEQCLSRDYNIFCHYLRRTISNDFYEGIRAKVIDKDNKPKWEPSKLDLVNEELVDQ 181
           R + ++ CL +DY I CH +RRT + DF EG RAK+ +KD +PKWEPSKL+LV++E+VDQ
Sbjct: 272 RTKELKDCLIQDYXIVCHLIRRTFNRDFIEGSRAKLFEKDKQPKWEPSKLELVSDEMVDQ 331

Query: 182 FFSNVNDDEWESLQFPDR 235
           +F  V+D +WE LQ P+R
Sbjct: 332 YFQKVDDADWEYLQLPER 349


>ref|XP_002264185.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase 1 [Vitis vinifera]
           gi|297744830|emb|CBI38098.3| unnamed protein product
           [Vitis vinifera]
          Length = 383

 Score =  102 bits (253), Expect = 4e-20
 Identities = 40/76 (52%), Positives = 60/76 (78%)
 Frame = +2

Query: 2   RVQNIEQCLSRDYNIFCHYLRRTISNDFYEGIRAKVIDKDNKPKWEPSKLDLVNEELVDQ 181
           R+Q++ QCL+R+Y + CH L+  +S DF+EG RA ++DKD  PKWEPS+L+ +NE +V+Q
Sbjct: 295 RLQDVGQCLTREYRMVCHVLQGEVSKDFFEGCRAILLDKDKNPKWEPSRLEQINESMVEQ 354

Query: 182 FFSNVNDDEWESLQFP 229
           +FS V+D+EWE L+ P
Sbjct: 355 YFSKVDDEEWEDLKLP 370


Top