BLASTX nr result

ID: Glycyrrhiza23_contig00024621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024621
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629097.1| Ring finger protein [Medicago truncatula] gi...    93   1e-34
ref|XP_003537694.1| PREDICTED: RING-H2 finger protein ATL8-like ...    75   2e-27
ref|XP_003517122.1| PREDICTED: RING-H2 finger protein ATL8-like ...    75   6e-26
ref|XP_003612411.1| Ring finger protein [Medicago truncatula] gi...    74   1e-25
ref|XP_003533404.1| PREDICTED: RING-H2 finger protein ATL80-like...    68   6e-23

>ref|XP_003629097.1| Ring finger protein [Medicago truncatula]
           gi|355523119|gb|AET03573.1| Ring finger protein
           [Medicago truncatula]
          Length = 203

 Score = 93.2 bits (230), Expect(2) = 1e-34
 Identities = 49/87 (56%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = -3

Query: 267 CIDTWLGSHSSCPSCRAPFAVARCQKCGLFQQVPXXXXXXXXXXGETDSKSLAGDS-ELV 91
           C+DTWLGSHSSCPSCRAPFAVARCQKCGL+Q             GET+ K+  G++ E+V
Sbjct: 125 CVDTWLGSHSSCPSCRAPFAVARCQKCGLYQPT-----AAGEVAGETEQKTAGGENVEVV 179

Query: 90  ATNNNVNCISIDIDRHSHSVADNGFLP 10
               N NC    +DRH H+V  NGFLP
Sbjct: 180 VV--NANCNGNSVDRHRHNV-HNGFLP 203



 Score = 78.2 bits (191), Expect(2) = 1e-34
 Identities = 35/45 (77%), Positives = 41/45 (91%)
 Frame = -1

Query: 509 AQANRGLKKKVVNSLPKFTYVDGSPVKWVVSSECAICLSEFAAGD 375
           A AN+GLKKKV+NSLPKFTY+D +P KWVVSSECAIC+SEF AG+
Sbjct: 65  AVANKGLKKKVLNSLPKFTYLDDTPGKWVVSSECAICISEFTAGE 109


>ref|XP_003537694.1| PREDICTED: RING-H2 finger protein ATL8-like [Glycine max]
          Length = 226

 Score = 74.7 bits (182), Expect(2) = 2e-27
 Identities = 33/45 (73%), Positives = 39/45 (86%)
 Frame = -1

Query: 509 AQANRGLKKKVVNSLPKFTYVDGSPVKWVVSSECAICLSEFAAGD 375
           A AN+GLKKKV+ SLPKF YVD +P KW+ +SECAICL+EFAAGD
Sbjct: 72  ALANKGLKKKVLQSLPKFAYVDSNPSKWLATSECAICLAEFAAGD 116



 Score = 72.8 bits (177), Expect(2) = 2e-27
 Identities = 41/97 (42%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
 Frame = -3

Query: 267 CIDTWLGSHSSCPSCRAPFAVARCQKCGLFQQVPXXXXXXXXXXGETDSK---------- 118
           CIDTWLGSHSSCPSCR   AVARCQKCG F               E  S+          
Sbjct: 132 CIDTWLGSHSSCPSCRQVLAVARCQKCGRFPATGAGASRTPATEPELKSREDNNAASYSN 191

Query: 117 -SLAGDSELVATNNNVNCISIDIDRHSHSVADNGFLP 10
            ++  +S+   +N+N NC +++   HSH V ++GFLP
Sbjct: 192 NNINNNSDRGGSNSNSNC-NMEHHHHSHHV-NSGFLP 226


>ref|XP_003517122.1| PREDICTED: RING-H2 finger protein ATL8-like [Glycine max]
          Length = 223

 Score = 74.7 bits (182), Expect(2) = 6e-26
 Identities = 33/45 (73%), Positives = 39/45 (86%)
 Frame = -1

Query: 509 AQANRGLKKKVVNSLPKFTYVDGSPVKWVVSSECAICLSEFAAGD 375
           A AN+GLKKKV+ SLPKF YVD +P KWV +SECAICL++FAAGD
Sbjct: 72  ALANKGLKKKVLQSLPKFAYVDSNPSKWVATSECAICLADFAAGD 116



 Score = 67.8 bits (164), Expect(2) = 6e-26
 Identities = 40/95 (42%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
 Frame = -3

Query: 267 CIDTWLGSHSSCPSCRAPFAVARCQKCGLFQQVPXXXXXXXXXXGETDSK---SLAGDSE 97
           CIDTWLGSHSSCPSCR   AV RCQKCG F               E  S+   ++A +S 
Sbjct: 132 CIDTWLGSHSSCPSCRQILAVTRCQKCGRFPATGAGASRTPATEPELKSREDNNVASNSS 191

Query: 96  LVATN------NNVNCISIDIDRHSHSVADNGFLP 10
               N      NN NC   +I+ H     ++GFLP
Sbjct: 192 NNINNNSDSGGNNSNC---NIEHHHSHHVNSGFLP 223


>ref|XP_003612411.1| Ring finger protein [Medicago truncatula]
           gi|355513746|gb|AES95369.1| Ring finger protein
           [Medicago truncatula] gi|388496508|gb|AFK36320.1|
           unknown [Medicago truncatula]
          Length = 215

 Score = 73.6 bits (179), Expect(2) = 1e-25
 Identities = 32/45 (71%), Positives = 40/45 (88%)
 Frame = -1

Query: 509 AQANRGLKKKVVNSLPKFTYVDGSPVKWVVSSECAICLSEFAAGD 375
           A AN+GLKKKV+ SLPKF+YVD +P KW+ ++ECAICLS+FAAGD
Sbjct: 72  ALANKGLKKKVLQSLPKFSYVDSNPGKWLATTECAICLSDFAAGD 116



 Score = 68.2 bits (165), Expect(2) = 1e-25
 Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
 Frame = -3

Query: 267 CIDTWLGSHSSCPSCRAPFAVARCQKCGLFQQVPXXXXXXXXXXGETDSKSLAGDSELVA 88
           CIDTWLGSHSSCPSCR   AV RCQKCG F               E  S+    DS + A
Sbjct: 132 CIDTWLGSHSSCPSCRQILAVTRCQKCGRFPANGGEATGVTVSEPEMKSRE---DSNVGA 188

Query: 87  TNNN--VNCISIDIDRHSHSVADNGFLP 10
            +N+  V+  S +   H+HS  ++GFLP
Sbjct: 189 NSNSGGVSSCSNNSAHHNHS-GNSGFLP 215


>ref|XP_003533404.1| PREDICTED: RING-H2 finger protein ATL80-like [Glycine max]
          Length = 203

 Score = 67.8 bits (164), Expect(2) = 6e-23
 Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
 Frame = -3

Query: 267 CIDTWLGSHSSCPSCRAPFA-VARCQKCGLFQQVPXXXXXXXXXXGETDSKSLAGDSELV 91
           C+DTWL SHSSCPSCRAPFA VARCQKCG F  V             ++SK++  D+  V
Sbjct: 128 CVDTWLASHSSCPSCRAPFAVVARCQKCGHFPAV-------ASASAASESKAVGCDNAAV 180

Query: 90  -ATNNNVNCISIDIDRHSHSVADNGFLP 10
            A N N N + I     ++  ++ GFLP
Sbjct: 181 SAANANRNNVII-----TNGFSNYGFLP 203



 Score = 64.7 bits (156), Expect(2) = 6e-23
 Identities = 34/46 (73%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = -1

Query: 509 AQANRGLKKKVVNSLPKFTYV-DGSPVKWVVSSECAICLSEFAAGD 375
           A AN+GLKKKVVNSLPKFTY  DG   KW   SECAICL+EF AGD
Sbjct: 70  ATANKGLKKKVVNSLPKFTYADDGDRRKW---SECAICLTEFGAGD 112


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