BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024616
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
ref|XP_003609573.1| Pentatricopeptide repeat-containing protein ...   172   3e-41
ref|XP_002879637.1| pentatricopeptide repeat-containing protein ...   120   1e-25
ref|XP_002516850.1| pentatricopeptide repeat-containing protein,...   118   4e-25
ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containi...   115   4e-24

>ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
           mitochondrial-like [Glycine max]
          Length = 629

 Score =  172 bits (436), Expect = 3e-41
 Identities = 84/100 (84%), Positives = 89/100 (89%)
 Frame = +2

Query: 2   PDDARKVFDEMAASNEVTWCSLLFAYANSCDRFGMALELFRSMPERVEIAWNIMIAGHAR 181
           PDDARKVFDE + SNEVTWCSL+FAYANSC R G+ALELFRSMPERV IAWNIMI GHAR
Sbjct: 124 PDDARKVFDETSDSNEVTWCSLMFAYANSC-RLGVALELFRSMPERVVIAWNIMIVGHAR 182

Query: 182 CGEVEACLRLFKEMCGSLYQPDQWTLSALMNACAESMELL 301
            GEVEACL LFKEMCGSL QPDQWT SAL+NACA SME+L
Sbjct: 183 RGEVEACLHLFKEMCGSLCQPDQWTFSALINACAVSMEML 222



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/93 (34%), Positives = 50/93 (53%)
 Frame = +2

Query: 5   DDARKVFDEMAASNEVTWCSLLFAYANSCDRFGMALELFRSMPERVEIAWNIMIAGHARC 184
           DDA KVF+     N+V+W +++ A+    D    A   F+  PER  ++W  MIAG+ R 
Sbjct: 257 DDAMKVFNSFGCFNQVSWNAIIDAHMKLGDT-QKAFLAFQKAPERNIVSWTSMIAGYTRN 315

Query: 185 GEVEACLRLFKEMCGSLYQPDQWTLSALMNACA 283
           G  E  L +F ++  +  Q D     A+++ACA
Sbjct: 316 GNGELALSMFLDLTRNSVQLDDLVAGAVLHACA 348


>ref|XP_003609573.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510628|gb|AES91770.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 665

 Score =  172 bits (436), Expect = 3e-41
 Identities = 82/100 (82%), Positives = 89/100 (89%)
 Frame = +2

Query: 2   PDDARKVFDEMAASNEVTWCSLLFAYANSCDRFGMALELFRSMPERVEIAWNIMIAGHAR 181
           P+DARKVFDEM  SNEVTWCSLLFAYAN+C RF MA E+FRSMPE+VEIAWNI+IA HAR
Sbjct: 123 PNDARKVFDEMNYSNEVTWCSLLFAYANTC-RFDMAFEIFRSMPEKVEIAWNIIIAAHAR 181

Query: 182 CGEVEACLRLFKEMCGSLYQPDQWTLSALMNACAESMELL 301
           CGEVEACL LFKEMC +LYQPDQWT SALM+AC ESME L
Sbjct: 182 CGEVEACLHLFKEMCENLYQPDQWTFSALMSACTESMESL 221



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/92 (34%), Positives = 51/92 (55%)
 Frame = +2

Query: 8   DARKVFDEMAASNEVTWCSLLFAYANSCDRFGMALELFRSMPERVEIAWNIMIAGHARCG 187
           DA KVF+   A N+V+W +++ A+    D    AL  F+  PE+  ++W  MI G+ R G
Sbjct: 257 DAVKVFNSGGAFNQVSWNAIIDAHMKVGDT-QKALLAFQQAPEKNIVSWTSMIVGYTRNG 315

Query: 188 EVEACLRLFKEMCGSLYQPDQWTLSALMNACA 283
             +  L LF +M  + +Q D     A+++ACA
Sbjct: 316 NGDLALSLFLDMKRNSFQLDDLVAGAVLHACA 347


>ref|XP_002879637.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325476|gb|EFH55896.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 624

 Score =  120 bits (300), Expect = 1e-25
 Identities = 58/99 (58%), Positives = 78/99 (78%), Gaps = 2/99 (2%)
 Frame = +2

Query: 11  ARKVFDEMA--ASNEVTWCSLLFAYANSCDRFGMALELFRSMPERVEIAWNIMIAGHARC 184
           A KVF +M   + NEVTWCSLLFAY N+ ++F  AL++F  MP+RV  AWNIMI+GHA+C
Sbjct: 124 ANKVFRDMCCHSRNEVTWCSLLFAYMNA-EQFEAALDVFVEMPKRVPFAWNIMISGHAQC 182

Query: 185 GEVEACLRLFKEMCGSLYQPDQWTLSALMNACAESMELL 301
           G++E+CLRLFKEM  S ++PD +T S+LMNACA+S  ++
Sbjct: 183 GKIESCLRLFKEMLESEFEPDCFTFSSLMNACADSSNVV 221



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
 Frame = +2

Query: 5   DDARKVFDEMAASNEVTWCSLLFAYANSCDRFG---MALELFRSMPERVEIAWNIMIAGH 175
           DD  +  + +    +V+W S++    ++C + G    ALE+FR  PE+  + W  MIAG+
Sbjct: 256 DDVMRELESIEVLTQVSWNSII----DACVKVGETDKALEVFRLAPEKNIVTWTTMIAGY 311

Query: 176 ARCGEVEACLRLFKEMCGSLYQPDQWTLSALMNACA 283
            R G+ E  LR F EM  S    D +   A+++AC+
Sbjct: 312 GRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACS 347


>ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543938|gb|EEF45464.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 623

 Score =  118 bits (296), Expect = 4e-25
 Identities = 59/97 (60%), Positives = 70/97 (72%)
 Frame = +2

Query: 11  ARKVFDEMAASNEVTWCSLLFAYANSCDRFGMALELFRSMPERVEIAWNIMIAGHARCGE 190
           A +VF EM   NEV+WCSLLFAY NS  RF  A E+F  MP + EIAWN MIAG  R GE
Sbjct: 125 AGQVFKEMGDINEVSWCSLLFAYTNS-GRFSEASEIFNLMPRKFEIAWNTMIAGLGRYGE 183

Query: 191 VEACLRLFKEMCGSLYQPDQWTLSALMNACAESMELL 301
           +E CL +F+EM  SL +PDQWT SAL++AC ES+E L
Sbjct: 184 IELCLDMFREMRESLLEPDQWTYSALISACTESLEFL 220



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/93 (33%), Positives = 52/93 (55%)
 Frame = +2

Query: 5   DDARKVFDEMAASNEVTWCSLLFAYANSCDRFGMALELFRSMPERVEIAWNIMIAGHARC 184
           +DA KV +      +V+W +++ AY         A  +F+S+PE+  ++W  MI G+AR 
Sbjct: 255 NDALKVVESTGRLTQVSWNAIIDAYMK-VGYVNEAYLMFQSLPEKNIVSWTSMITGYARN 313

Query: 185 GEVEACLRLFKEMCGSLYQPDQWTLSALMNACA 283
           G  E  LR F  M  + + PD +T  A+++AC+
Sbjct: 314 GYGEEALRFFVAMASNCFLPDDFTFGAVLHACS 346


>ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
           mitochondrial-like [Vitis vinifera]
          Length = 623

 Score =  115 bits (288), Expect = 4e-24
 Identities = 56/95 (58%), Positives = 71/95 (74%)
 Frame = +2

Query: 11  ARKVFDEMAASNEVTWCSLLFAYANSCDRFGMALELFRSMPERVEIAWNIMIAGHARCGE 190
           AR+VF+EM+  NEV+WCSLLFAY +S   F +A  +F  MP++VEIAWNIMI+G+ +CG+
Sbjct: 125 ARRVFEEMSIMNEVSWCSLLFAYTSS-GLFDVARVVFDGMPKKVEIAWNIMISGYGQCGD 183

Query: 191 VEACLRLFKEMCGSLYQPDQWTLSALMNACAESME 295
           VE CL LFK+M     QPDQWT SAL+NA  E  E
Sbjct: 184 VELCLGLFKKMREDSLQPDQWTFSALVNALCELQE 218



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/93 (33%), Positives = 52/93 (55%)
 Frame = +2

Query: 5   DDARKVFDEMAASNEVTWCSLLFAYANSCDRFGMALELFRSMPERVEIAWNIMIAGHARC 184
           DD  KVF+ +    +V+W +++ A+    D     L +F+  PE+  ++W  MI G+AR 
Sbjct: 255 DDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFL-VFQLAPEKNVVSWTSMITGYARN 313

Query: 185 GEVEACLRLFKEMCGSLYQPDQWTLSALMNACA 283
           G  E  L  F +M  +  QPD +T  A+++AC+
Sbjct: 314 GHGEQALSFFVKMMENHIQPDDFTFGAVLHACS 346