BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024613
         (757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec...   226   5e-57
ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation spec...   225   7e-57
emb|CBI24510.3| unnamed protein product [Vitis vinifera]              221   1e-55
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...   221   1e-55
ref|XP_002510905.1| cleavage and polyadenylation specificity fac...   214   2e-53

>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1447

 Score =  226 bits (575), Expect = 5e-57
 Identities = 111/116 (95%), Positives = 114/116 (98%)
 Frame = -2

Query: 756  SDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVPHVAGLNPKAFRQFRSN 577
            SDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVPHVAGLNP+AFR FRSN
Sbjct: 1332 SDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVPHVAGLNPRAFRLFRSN 1391

Query: 576  GKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAQQVGTTRSQVLTNLSDLSLGTSFL 409
            GKAHRPGPDSIVDCELLCHYEMLPLEEQLEIA QVGTTRSQ+L+NLSDLSLGTSFL
Sbjct: 1392 GKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAHQVGTTRSQILSNLSDLSLGTSFL 1447


>ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max]
          Length = 1449

 Score =  225 bits (574), Expect = 7e-57
 Identities = 110/116 (94%), Positives = 114/116 (98%)
 Frame = -2

Query: 756  SDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVPHVAGLNPKAFRQFRSN 577
            SDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVPHVAGLNP+AFR FRSN
Sbjct: 1334 SDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVPHVAGLNPRAFRLFRSN 1393

Query: 576  GKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAQQVGTTRSQVLTNLSDLSLGTSFL 409
            GKAHRPGPDSIVDCELLCHYEMLPLEEQLEIA Q+GTTRSQ+L+NLSDLSLGTSFL
Sbjct: 1394 GKAHRPGPDSIVDCELLCHYEMLPLEEQLEIANQIGTTRSQILSNLSDLSLGTSFL 1449


>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  221 bits (563), Expect = 1e-55
 Identities = 105/116 (90%), Positives = 114/116 (98%)
 Frame = -2

Query: 756  SDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVPHVAGLNPKAFRQFRSN 577
            SDKTNRFALLFGTLDGSIGCIAPLDE+TFRRLQSLQ+KLVDAVPHVAGLNP++FRQFRSN
Sbjct: 1333 SDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVDAVPHVAGLNPRSFRQFRSN 1392

Query: 576  GKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAQQVGTTRSQVLTNLSDLSLGTSFL 409
            GKAHRPGPD+IVDCELLCHYEMLP EEQLEIAQQ+GTTR Q+L+NL+DLSLGTSFL
Sbjct: 1393 GKAHRPGPDNIVDCELLCHYEMLPFEEQLEIAQQIGTTRMQILSNLNDLSLGTSFL 1448


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Vitis vinifera]
          Length = 1442

 Score =  221 bits (563), Expect = 1e-55
 Identities = 105/116 (90%), Positives = 114/116 (98%)
 Frame = -2

Query: 756  SDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVPHVAGLNPKAFRQFRSN 577
            SDKTNRFALLFGTLDGSIGCIAPLDE+TFRRLQSLQ+KLVDAVPHVAGLNP++FRQFRSN
Sbjct: 1327 SDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVDAVPHVAGLNPRSFRQFRSN 1386

Query: 576  GKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAQQVGTTRSQVLTNLSDLSLGTSFL 409
            GKAHRPGPD+IVDCELLCHYEMLP EEQLEIAQQ+GTTR Q+L+NL+DLSLGTSFL
Sbjct: 1387 GKAHRPGPDNIVDCELLCHYEMLPFEEQLEIAQQIGTTRMQILSNLNDLSLGTSFL 1442


>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
            [Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
            and polyadenylation specificity factor cpsf, putative
            [Ricinus communis]
          Length = 1461

 Score =  214 bits (545), Expect = 2e-53
 Identities = 103/115 (89%), Positives = 113/115 (98%)
 Frame = -2

Query: 753  DKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVPHVAGLNPKAFRQFRSNG 574
            DKTNRFALLFGTLDGSIGCIAPLDE+TFRRLQSLQRKLVDAVPHVAGLNP++FRQFRS+G
Sbjct: 1347 DKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQRKLVDAVPHVAGLNPRSFRQFRSDG 1406

Query: 573  KAHRPGPDSIVDCELLCHYEMLPLEEQLEIAQQVGTTRSQVLTNLSDLSLGTSFL 409
            K HRPGP+SIVDCELL H+EMLPLEEQLEIAQQVGTTR+Q+L+NL+DLSLGTSFL
Sbjct: 1407 KVHRPGPESIVDCELLSHFEMLPLEEQLEIAQQVGTTRAQILSNLNDLSLGTSFL 1461