BLASTX nr result

ID: Glycyrrhiza23_contig00024541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024541
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containi...    98   8e-19
ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containi...    94   9e-18
ref|XP_002322250.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
emb|CBI15662.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16

>ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 691

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 41/46 (89%), Positives = 45/46 (97%)
 Frame = +3

Query: 3   QGHRVCGNCHNAIKLIAKVTGREIVLRDASRFHHFKNGSCSCGDYW 140
           QGHRVCG+CH+AIKLIA VTGREIV+RDASRFHHF+NGSCSCGDYW
Sbjct: 646 QGHRVCGDCHSAIKLIAMVTGREIVVRDASRFHHFRNGSCSCGDYW 691


>ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 690

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 39/46 (84%), Positives = 44/46 (95%)
 Frame = +3

Query: 3   QGHRVCGNCHNAIKLIAKVTGREIVLRDASRFHHFKNGSCSCGDYW 140
           QGHRVCG+CH+AIK IA VTGREIV+RDASRFHHF++GSCSCGDYW
Sbjct: 645 QGHRVCGDCHSAIKFIAMVTGREIVVRDASRFHHFRDGSCSCGDYW 690


>ref|XP_002322250.1| predicted protein [Populus trichocarpa] gi|222869246|gb|EEF06377.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 37/46 (80%), Positives = 42/46 (91%)
 Frame = +3

Query: 3   QGHRVCGNCHNAIKLIAKVTGREIVLRDASRFHHFKNGSCSCGDYW 140
           QGHR+CG+CH AIKLIA+VTGREIV+RDA RFHHFK+G CSC DYW
Sbjct: 503 QGHRICGDCHEAIKLIARVTGREIVIRDAGRFHHFKHGHCSCEDYW 548


>emb|CBI15662.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 38/46 (82%), Positives = 43/46 (93%)
 Frame = +3

Query: 3   QGHRVCGNCHNAIKLIAKVTGREIVLRDASRFHHFKNGSCSCGDYW 140
           Q HR+CG+CH+AIKLIA VT REIV+RDASRFHHFK+GSCSCGDYW
Sbjct: 612 QSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 657


>ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 38/46 (82%), Positives = 43/46 (93%)
 Frame = +3

Query: 3   QGHRVCGNCHNAIKLIAKVTGREIVLRDASRFHHFKNGSCSCGDYW 140
           Q HR+CG+CH+AIKLIA VT REIV+RDASRFHHFK+GSCSCGDYW
Sbjct: 659 QSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704


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