BLASTX nr result

ID: Glycyrrhiza23_contig00024526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024526
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545961.1| PREDICTED: uncharacterized protein LOC100779...    94   2e-17
ref|XP_003532866.1| PREDICTED: uncharacterized protein LOC100811...    91   1e-16
ref|XP_003595781.1| Bromodomain protein [Medicago truncatula] gi...    80   2e-13

>ref|XP_003545961.1| PREDICTED: uncharacterized protein LOC100779988 [Glycine max]
          Length = 746

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 53/78 (67%), Positives = 57/78 (73%)
 Frame = -3

Query: 554 VKEQKKVVNSGKGEKGKERASTRHNNGGGESGDXXXXXXXXXXXXXXXKRSVGRPPKKAA 375
           VKEQKK+VN+GKG+KGKERAS RHNN GG SG                KRSVGRPPKKAA
Sbjct: 659 VKEQKKMVNNGKGDKGKERAS-RHNNVGGGSGSGDKRNSKNVENNSQSKRSVGRPPKKAA 717

Query: 374 ETSTVSAKRGRESSASAG 321
           ET+  SAKRGRESSASAG
Sbjct: 718 ETNAGSAKRGRESSASAG 735


>ref|XP_003532866.1| PREDICTED: uncharacterized protein LOC100811021 [Glycine max]
          Length = 747

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 51/77 (66%), Positives = 56/77 (72%)
 Frame = -3

Query: 551 KEQKKVVNSGKGEKGKERASTRHNNGGGESGDXXXXXXXXXXXXXXXKRSVGRPPKKAAE 372
           KEQKK+VN+GKG+KGKERAS RHNN GG SG                KRSVGRPPKKAAE
Sbjct: 661 KEQKKMVNNGKGDKGKERAS-RHNNVGGGSGSADKRNNKNIENSSQSKRSVGRPPKKAAE 719

Query: 371 TSTVSAKRGRESSASAG 321
           T+  SAKRGRE+SASAG
Sbjct: 720 TNAGSAKRGRENSASAG 736


>ref|XP_003595781.1| Bromodomain protein [Medicago truncatula]
           gi|357451019|ref|XP_003595786.1| Bromodomain protein
           [Medicago truncatula] gi|355484829|gb|AES66032.1|
           Bromodomain protein [Medicago truncatula]
           gi|355484834|gb|AES66037.1| Bromodomain protein
           [Medicago truncatula]
          Length = 719

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 48/77 (62%), Positives = 52/77 (67%)
 Frame = -3

Query: 551 KEQKKVVNSGKGEKGKERASTRHNNGGGESGDXXXXXXXXXXXXXXXKRSVGRPPKKAAE 372
           KEQKKVVN+GKGEKGKERAS  ++ GG  SGD               KR+VGRPPKKAAE
Sbjct: 638 KEQKKVVNNGKGEKGKERASRYNDGGGSGSGD-----KRNKNIESNSKRNVGRPPKKAAE 692

Query: 371 TSTVSAKRGRESSASAG 321
           T   S KRGRESSAS G
Sbjct: 693 T-VASTKRGRESSASGG 708


Top