BLASTX nr result

ID: Glycyrrhiza23_contig00024481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024481
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521929.1| PREDICTED: putative ribonuclease H protein A...    66   3e-09
ref|XP_003521928.1| PREDICTED: uncharacterized protein LOC100812...    66   3e-09
ref|XP_003521927.1| PREDICTED: uncharacterized protein LOC100811...    66   3e-09
ref|XP_002324246.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09
ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08

>ref|XP_003521929.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 192

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
 Frame = +1

Query: 19  RGFTNIQLESDSLTAVKLINGDCLTTHQCKPLVNEIKNLFHDAGRIQVQHVYCEANQVAD 198
           RG+ N+ +ESDSL A+++IN      H+   L + I+++     RI   HVY E N VAD
Sbjct: 98  RGYRNLIVESDSLKAIQIINA-----HKGDFLRSSIQHMTRMVDRICWNHVYRETNSVAD 152

Query: 199 LLANHGLSL--DISSRIFEFVPDFLMNSLLGD 288
             A HGLSL  D S R+F+  PDF+ + L GD
Sbjct: 153 GFAKHGLSLSQDQSIRVFDSAPDFIESRLYGD 184


>ref|XP_003521928.1| PREDICTED: uncharacterized protein LOC100812157 [Glycine max]
          Length = 551

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
 Frame = +1

Query: 19  RGFTNIQLESDSLTAVKLINGDCLTTHQCKPLVNEIKNLFHDAGRIQVQHVYCEANQVAD 198
           RG+ N+ +ESDSL A+++IN      H+   L + I+++     RI   HVY E N VAD
Sbjct: 196 RGYRNLIVESDSLKAIQIINA-----HKGDFLRSSIQHMTRMVDRICWNHVYRETNSVAD 250

Query: 199 LLANHGLSL--DISSRIFEFVPDFLMNSLLGD 288
             A HGLSL  D S R+F+  PDF+ + L GD
Sbjct: 251 GFAKHGLSLSQDQSIRVFDSAPDFIESRLYGD 282


>ref|XP_003521927.1| PREDICTED: uncharacterized protein LOC100811627 [Glycine max]
          Length = 445

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
 Frame = +1

Query: 19  RGFTNIQLESDSLTAVKLINGDCLTTHQCKPLVNEIKNLFHDAGRIQVQHVYCEANQVAD 198
           RG+ N+ +ESDSL A+++IN      H+   L + I+++     RI   HVY E N VAD
Sbjct: 196 RGYRNLIVESDSLKAIQIINA-----HKGDFLRSSIQHMTRMVDRICWNHVYRETNSVAD 250

Query: 199 LLANHGLSL--DISSRIFEFVPDFLMNSLLGD 288
             A HGLSL  D S R+F+  PDF+ + L GD
Sbjct: 251 GFAKHGLSLSQDQSIRVFDSAPDFIESRLYGD 282


>ref|XP_002324246.1| predicted protein [Populus trichocarpa] gi|222865680|gb|EEF02811.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 35/80 (43%), Positives = 48/80 (60%)
 Frame = +1

Query: 1   LRIAKGRGFTNIQLESDSLTAVKLINGDCLTTHQCKPLVNEIKNLFHDAGRIQVQHVYCE 180
           L++A  RGF  + LESDS   V LINGD +   +   ++ +IK++      +   HVY E
Sbjct: 137 LQLAWDRGFRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKDMLGRDWEVTTYHVYRE 196

Query: 181 ANQVADLLANHGLSLDISSR 240
           AN VAD LAN+GLS D+  R
Sbjct: 197 ANCVADWLANYGLSRDLLDR 216


>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
 Frame = +1

Query: 1   LRIAKGRGFTNIQLESDSLTAVKLINGDCLTTHQCKPLVNEIKNLFHDAGRIQVQHVYCE 180
           L++A  RGF  + LESDS   V LINGD +   +   ++ +IK +      +   HVY E
Sbjct: 137 LQLAWDRGFRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKGMLGRNWEVTTYHVYRE 196

Query: 181 ANQVADLLANHGLS---LDISSRIFEFVPDFLMNSLLGD 288
           AN VAD LAN+GL+   LD  S + E +P  L   L  D
Sbjct: 197 ANCVADWLANYGLTRDLLDRGSDVLEELPSGLYPLLYYD 235


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