BLASTX nr result

ID: Glycyrrhiza23_contig00024474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024474
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540651.1| PREDICTED: translocase of chloroplast 132, c...    75   3e-18
ref|XP_003538983.1| PREDICTED: translocase of chloroplast 132, c...    73   1e-17
ref|XP_002277504.2| PREDICTED: translocase of chloroplast 120, c...    72   3e-17
ref|XP_002306172.1| predicted protein [Populus trichocarpa] gi|2...    70   6e-17
ref|XP_004163662.1| PREDICTED: LOW QUALITY PROTEIN: translocase ...    70   8e-17

>ref|XP_003540651.1| PREDICTED: translocase of chloroplast 132, chloroplastic-like
           [Glycine max]
          Length = 1224

 Score = 74.7 bits (182), Expect(2) = 3e-18
 Identities = 39/64 (60%), Positives = 41/64 (64%)
 Frame = +1

Query: 58  WKPHLLLLSFASKILAEANALLKLQDSPPEKPFTARARVXXXXXXXXXXXXXXXXXXXXD 237
           WKPHLLLLSFASKILAEANALLKLQDSPP KP+ ARAR                     +
Sbjct: 786 WKPHLLLLSFASKILAEANALLKLQDSPPGKPYVARARAPPLPFLLSTLLQSRPQLKLPE 845

Query: 238 EQFG 249
           EQFG
Sbjct: 846 EQFG 849



 Score = 41.6 bits (96), Expect(2) = 3e-18
 Identities = 19/27 (70%), Positives = 20/27 (74%)
 Frame = +3

Query: 3   NHSACRINRAGQRVLPNGLETSPVTLI 83
           NHSACR NRAGQRVLPNG    P  L+
Sbjct: 766 NHSACRTNRAGQRVLPNGQVWKPHLLL 792


>ref|XP_003538983.1| PREDICTED: translocase of chloroplast 132, chloroplastic-like
            [Glycine max]
          Length = 1367

 Score = 73.2 bits (178), Expect(2) = 1e-17
 Identities = 38/64 (59%), Positives = 40/64 (62%)
 Frame = +1

Query: 58   WKPHLLLLSFASKILAEANALLKLQDSPPEKPFTARARVXXXXXXXXXXXXXXXXXXXXD 237
            WKPHLLLLSFASKILAEANALLKLQDSPP KP+ AR R                     +
Sbjct: 929  WKPHLLLLSFASKILAEANALLKLQDSPPGKPYVARTRAPPLPFLLSTLLQSRPQLKLPE 988

Query: 238  EQFG 249
            EQFG
Sbjct: 989  EQFG 992



 Score = 41.6 bits (96), Expect(2) = 1e-17
 Identities = 19/27 (70%), Positives = 20/27 (74%)
 Frame = +3

Query: 3   NHSACRINRAGQRVLPNGLETSPVTLI 83
           NHSACR NRAGQRVLPNG    P  L+
Sbjct: 909 NHSACRTNRAGQRVLPNGQVWKPHLLL 935


>ref|XP_002277504.2| PREDICTED: translocase of chloroplast 120, chloroplastic-like
           [Vitis vinifera]
          Length = 1318

 Score = 72.0 bits (175), Expect(2) = 3e-17
 Identities = 34/38 (89%), Positives = 35/38 (92%)
 Frame = +1

Query: 58  WKPHLLLLSFASKILAEANALLKLQDSPPEKPFTARAR 171
           WKPHLLLLSFASKILAEAN LLKLQDSPP KPFT R+R
Sbjct: 882 WKPHLLLLSFASKILAEANTLLKLQDSPPGKPFTTRSR 919



 Score = 41.2 bits (95), Expect(2) = 3e-17
 Identities = 19/27 (70%), Positives = 20/27 (74%)
 Frame = +3

Query: 3   NHSACRINRAGQRVLPNGLETSPVTLI 83
           NHSACR NRAGQRVLPNG    P  L+
Sbjct: 862 NHSACRTNRAGQRVLPNGQIWKPHLLL 888


>ref|XP_002306172.1| predicted protein [Populus trichocarpa] gi|222849136|gb|EEE86683.1|
           predicted protein [Populus trichocarpa]
          Length = 723

 Score = 70.5 bits (171), Expect(2) = 6e-17
 Identities = 37/64 (57%), Positives = 39/64 (60%)
 Frame = +1

Query: 58  WKPHLLLLSFASKILAEANALLKLQDSPPEKPFTARARVXXXXXXXXXXXXXXXXXXXXD 237
           WKPHLLLLSFASKILAEANALLKLQDS P KPF  RAR                     +
Sbjct: 288 WKPHLLLLSFASKILAEANALLKLQDSTPAKPFATRARAPPLPFLLSSLLQSRPQVKLPE 347

Query: 238 EQFG 249
           EQ+G
Sbjct: 348 EQYG 351



 Score = 41.6 bits (96), Expect(2) = 6e-17
 Identities = 19/27 (70%), Positives = 20/27 (74%)
 Frame = +3

Query: 3   NHSACRINRAGQRVLPNGLETSPVTLI 83
           NHSACR NRAGQRVLPNG    P  L+
Sbjct: 268 NHSACRTNRAGQRVLPNGQVWKPHLLL 294


>ref|XP_004163662.1| PREDICTED: LOW QUALITY PROTEIN: translocase of chloroplast 132,
            chloroplastic-like [Cucumis sativus]
          Length = 1268

 Score = 70.1 bits (170), Expect(2) = 8e-17
 Identities = 36/64 (56%), Positives = 40/64 (62%)
 Frame = +1

Query: 58   WKPHLLLLSFASKILAEANALLKLQDSPPEKPFTARARVXXXXXXXXXXXXXXXXXXXXD 237
            WKPHLLLLSFASKILAEAN LLKLQDSPP +PFT R++                     +
Sbjct: 832  WKPHLLLLSFASKILAEANTLLKLQDSPPGRPFTPRSKSPPLPFLLSSLLQSRPQVKLPE 891

Query: 238  EQFG 249
            EQFG
Sbjct: 892  EQFG 895



 Score = 41.6 bits (96), Expect(2) = 8e-17
 Identities = 19/27 (70%), Positives = 20/27 (74%)
 Frame = +3

Query: 3   NHSACRINRAGQRVLPNGLETSPVTLI 83
           NHSACR NRAGQRVLPNG    P  L+
Sbjct: 812 NHSACRTNRAGQRVLPNGQVWKPHLLL 838


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