BLASTX nr result

ID: Glycyrrhiza23_contig00024456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024456
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510276.1| conserved hypothetical protein [Ricinus comm...    95   7e-18
ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cu...    81   1e-13
ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cu...    81   1e-13
emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]    79   4e-13
sp|D0EL35.2|CTC1_ARATH RecName: Full=CST complex subunit CTC1; A...    60   2e-07

>ref|XP_002510276.1| conserved hypothetical protein [Ricinus communis]
           gi|223550977|gb|EEF52463.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1159

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/109 (44%), Positives = 70/109 (64%)
 Frame = +2

Query: 14  HGAFMGLCKHDFNGCGREMHCSFLKLVVPMSIFICHCKDTLVRMLKSENQNHCKLLSVGN 193
           HG     C+HD  GCGRE +C+ LKLV P+S F+ HC+   +++L    +N C++    +
Sbjct: 357 HGILTESCQHDAFGCGREQYCANLKLVPPISTFLHHCESMWMKVLVQLERN-CRIWPGNS 415

Query: 194 HFSILSRQARYNSRSVRRIIRSEDVGVVLLGYLKFDQLTRRLQLVDATG 340
             S+LS + R + R++RRI +SED+GV LLG LK    + RLQLVDA G
Sbjct: 416 SSSLLSCKGRSHGRTLRRIFQSEDIGVSLLGSLKISPSSGRLQLVDAMG 464


>ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1362

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/114 (39%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
 Frame = +2

Query: 2   FQTQHGAFMGLCKHDFNGCGREMHCSFLKLVVPMSIFICHCKDTLVRMLKSENQNHCKL- 178
           ++ QHG+ M L +HD  GC  E     L+ VVP+S+ I +C  T +R +  +N+   +  
Sbjct: 490 YRYQHGSMMKLYEHDSCGCASEPCNINLETVVPVSVLIFYCNSTCMRTMSLKNEKVVQYE 549

Query: 179 LSVGNHFSILSRQARYNSRSVRRIIRSEDVGVVLLGYLKFDQLTRRLQLVDATG 340
            +  +HF +L R  + +  + R+I RSED+G VL+G LK    + RLQLVDATG
Sbjct: 550 YNQLDHFRLLPRGGKSSHDTPRKIYRSEDIGFVLVGSLKISTYSGRLQLVDATG 603


>ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1383

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/114 (39%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
 Frame = +2

Query: 2   FQTQHGAFMGLCKHDFNGCGREMHCSFLKLVVPMSIFICHCKDTLVRMLKSENQNHCKL- 178
           ++ QHG+ M L +HD  GC  E     L+ VVP+S+ I +C  T +R +  +N+   +  
Sbjct: 490 YRYQHGSMMKLYEHDSCGCASEPCNINLETVVPVSVLIFYCNSTCMRTMSLKNEKVVQYE 549

Query: 179 LSVGNHFSILSRQARYNSRSVRRIIRSEDVGVVLLGYLKFDQLTRRLQLVDATG 340
            +  +HF +L R  + +  + R+I RSED+G VL+G LK    + RLQLVDATG
Sbjct: 550 YNQLDHFRLLPRGGKSSHDTPRKIYRSEDIGFVLVGSLKISTYSGRLQLVDATG 603


>emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]
          Length = 1618

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 48/132 (36%), Positives = 68/132 (51%), Gaps = 19/132 (14%)
 Frame = +2

Query: 2   FQTQHGAFMGLCKHDFNGCGREMHCSFLKLVVPMSIFICHCKDTLVRMLKSENQNHCKLL 181
           F  Q+G FM  CKHD  GCG E +   LKLV P+S  + HC+      +K++ +  C+ +
Sbjct: 560 FLWQYGVFMEFCKHDSCGCGTEPNYDQLKLVAPISNLVHHCE---AMWMKNQLEGDCETM 616

Query: 182 SVGNHFSILSRQARYNSRSVRRIIRSEDVGVVLLGYLKFDQL------------------ 307
              N FS LS   R +   + RI+ SE +GV+LLG LK  ++                  
Sbjct: 617 VNNNEFSQLSCGGRSHGLPITRILPSEAIGVILLGSLKVSKMNILFTHIIITTATELQIS 676

Query: 308 -TRRLQLVDATG 340
            + RLQL+DATG
Sbjct: 677 PSGRLQLIDATG 688


>sp|D0EL35.2|CTC1_ARATH RecName: Full=CST complex subunit CTC1; AltName: Full=Protein
           CONSERVED TELOMERE MAINTENANCE COMPONENT 1; Short=AtCTC1
          Length = 1272

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 43/112 (38%), Positives = 59/112 (52%)
 Frame = +2

Query: 2   FQTQHGAFMGLCKHDFNGCGREMHCSFLKLVVPMSIFICHCKDTLVRMLKSENQNHCKLL 181
           FQ + G F   C H+  GC  E     LKLV+P+S F+ H K  ++  L S+ +      
Sbjct: 452 FQPRGGIFTEFCMHESCGCNSEARDCNLKLVMPISSFVHHVK-VMLNELLSQIKKDFSAS 510

Query: 182 SVGNHFSILSRQARYNSRSVRRIIRSEDVGVVLLGYLKFDQLTRRLQLVDAT 337
              +H S  S   RYN+ +  + +RSED GV+LLG LK    + RLQL D T
Sbjct: 511 DCLSHSS--STWKRYNNTN-PKTLRSEDTGVILLGRLKISS-SGRLQLHDRT 558


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