BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024453
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556327.1| PREDICTED: probable RNA polymerase II transc...   164   2e-38
ref|XP_003591640.1| General transcription factor IIH subunit [Me...   160   2e-37
gb|ABP03696.1| BSD [Medicago truncatula]                              160   2e-37
ref|XP_003535467.1| PREDICTED: probable RNA polymerase II transc...   149   4e-34
ref|XP_004171236.1| PREDICTED: probable RNA polymerase II transc...   147   2e-33

>ref|XP_003556327.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Glycine max]
          Length = 587

 Score =  164 bits (415), Expect = 2e-38
 Identities = 77/95 (81%), Positives = 85/95 (89%)
 Frame = -1

Query: 286 MSSGQVVKRAKYKTTVKDPGTPGVLRLTQEKFVFRPNDPTSNNKLEVDFRIIKSHKHTKE 107
           MSS QVVKRAKYKTTVKDPGTPGVL+LTQ+KFVF+PNDPTS  KL+V+FR I+ HK TKE
Sbjct: 1   MSSRQVVKRAKYKTTVKDPGTPGVLKLTQDKFVFKPNDPTSKTKLDVEFRFIQGHKVTKE 60

Query: 106 GSNKPPWLNLTHSQGSYIFELESFSDLHTCRELVG 2
           GS KP WLNL HSQGSYIFELE+F+DLH CRELVG
Sbjct: 61  GSKKPAWLNLIHSQGSYIFELETFADLHVCRELVG 95


>ref|XP_003591640.1| General transcription factor IIH subunit [Medicago truncatula]
           gi|355480688|gb|AES61891.1| General transcription factor
           IIH subunit [Medicago truncatula]
          Length = 586

 Score =  160 bits (406), Expect = 2e-37
 Identities = 73/88 (82%), Positives = 82/88 (93%)
 Frame = -1

Query: 274 QVVKRAKYKTTVKDPGTPGVLRLTQEKFVFRPNDPTSNNKLEVDFRIIKSHKHTKEGSNK 95
           QVVKRAKYK+TVKDPGTPGV++LT++K VF+PNDPTSNNKL+VDFR+IKS K+TKEGS K
Sbjct: 7   QVVKRAKYKSTVKDPGTPGVIKLTRQKVVFKPNDPTSNNKLDVDFRLIKSQKNTKEGSTK 66

Query: 94  PPWLNLTHSQGSYIFELESFSDLHTCRE 11
           PPWLNL HSQGSYIFE ESFSDLH CRE
Sbjct: 67  PPWLNLVHSQGSYIFEFESFSDLHVCRE 94


>gb|ABP03696.1| BSD [Medicago truncatula]
          Length = 160

 Score =  160 bits (406), Expect = 2e-37
 Identities = 73/88 (82%), Positives = 82/88 (93%)
 Frame = -1

Query: 274 QVVKRAKYKTTVKDPGTPGVLRLTQEKFVFRPNDPTSNNKLEVDFRIIKSHKHTKEGSNK 95
           QVVKRAKYK+TVKDPGTPGV++LT++K VF+PNDPTSNNKL+VDFR+IKS K+TKEGS K
Sbjct: 7   QVVKRAKYKSTVKDPGTPGVIKLTRQKVVFKPNDPTSNNKLDVDFRLIKSQKNTKEGSTK 66

Query: 94  PPWLNLTHSQGSYIFELESFSDLHTCRE 11
           PPWLNL HSQGSYIFE ESFSDLH CRE
Sbjct: 67  PPWLNLVHSQGSYIFEFESFSDLHVCRE 94


>ref|XP_003535467.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Glycine max]
          Length = 604

 Score =  149 bits (377), Expect = 4e-34
 Identities = 71/94 (75%), Positives = 82/94 (87%)
 Frame = -1

Query: 286 MSSGQVVKRAKYKTTVKDPGTPGVLRLTQEKFVFRPNDPTSNNKLEVDFRIIKSHKHTKE 107
           MSS QVVKRAKYKTTVKDPGTPGVL+LTQ++FVF+PNDPTS  KL+V+FR I+ HK TKE
Sbjct: 1   MSSRQVVKRAKYKTTVKDPGTPGVLKLTQDRFVFKPNDPTSKTKLDVEFRFIQGHKVTKE 60

Query: 106 GSNKPPWLNLTHSQGSYIFELESFSDLHTCRELV 5
           GS +PP LNL  +QGS IFELESF+DLH CREL+
Sbjct: 61  GSKQPPLLNLIRAQGSCIFELESFADLHVCRELL 94


>ref|XP_004171236.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-3-like, partial [Cucumis sativus]
          Length = 220

 Score =  147 bits (372), Expect = 2e-33
 Identities = 71/97 (73%), Positives = 82/97 (84%), Gaps = 1/97 (1%)
 Frame = -1

Query: 289 RMSSGQVVKRAKYKTTVKDPGTPGVLRLTQEKFVFRPNDPTSNNKLEVDFRIIKSHKHTK 110
           RM +  V K AKYKT+VKDPGTPGVL +T+ KFVFRP+DPTS +KL+V+FR IK HK+TK
Sbjct: 25  RMGTKYVHKSAKYKTSVKDPGTPGVLEMTECKFVFRPSDPTSASKLDVEFRFIKGHKNTK 84

Query: 109 EGSNKPPWLNLTHSQ-GSYIFELESFSDLHTCRELVG 2
           EGSNKPPWLNLT  Q GSYIFE ++FSDLH CRELVG
Sbjct: 85  EGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVG 121