BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024422
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE80156.1| Ribonuclease H [Medicago truncatula]                    62   4e-17
gb|AEL30350.1| RNA-directed DNA polymerase [Arachis hypogaea]          46   7e-10
gb|ABN08698.1| RNA-directed DNA polymerase ; Ribonuclease H, put...    48   5e-09
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas...    65   6e-09
ref|XP_003612606.1| Replication protein A1-like protein [Medicag...    44   1e-08

>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
          Length = 438

 Score = 61.6 bits (148), Expect(2) = 4e-17
 Identities = 30/63 (47%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
 Frame = -3

Query: 333 KDLKYSAKSGFQWLLSNRGGGDLTKP---WSDLWKLQAPEKIRFFLWLAWHESIPTMQVL 163
           K+  YS KSGF WLL+ R       P   WS +W LQ PEK +F +WLA    +PT+ +L
Sbjct: 91  KNGTYSTKSGFHWLLTFRVPATDIIPHPSWSWIWNLQVPEKYKFLIWLACQNVVPTLSLL 150

Query: 162 HRR 154
           HRR
Sbjct: 151 HRR 153



 Score = 51.2 bits (121), Expect(2) = 4e-17
 Identities = 21/46 (45%), Positives = 31/46 (67%)
 Frame = -2

Query: 160 QKGVAQSASCSRCTGALEENLLHCVRDCTLSRQLWEKLGMGTANFF 23
           ++ +A S +C+RC G  +E  LHCVRDC  SR +W+K+G    +FF
Sbjct: 152 RRNIAPSPTCARC-GEEDETFLHCVRDCHFSRSIWQKIGFTGNDFF 196


>gb|AEL30350.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 673

 Score = 45.8 bits (107), Expect(3) = 7e-10
 Identities = 21/60 (35%), Positives = 30/60 (50%)
 Frame = -3

Query: 321 YSAKSGFQWLLSNRGGGDLTKPWSDLWKLQAPEKIRFFLWLAWHESIPTMQVLHRRGWPS 142
           Y +++G+ WL     G +  + W  LW    PEK +F  WL   E++PT     RRG  S
Sbjct: 344 YDSRNGYLWLCKQLFGWEERENWLWLWCQLVPEKHKFLAWLCLKEALPTASFRFRRGMSS 403



 Score = 39.3 bits (90), Expect(3) = 7e-10
 Identities = 13/38 (34%), Positives = 28/38 (73%)
 Frame = -2

Query: 160 QKGVAQSASCSRCTGALEENLLHCVRDCTLSRQLWEKL 47
           ++G++ S  C RC  + +E+++HC+RDC  ++ +W++L
Sbjct: 398 RRGMSSSDRCPRCLSS-QESVIHCIRDCPKAQLVWQRL 434



 Score = 22.3 bits (46), Expect(3) = 7e-10
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -2

Query: 478 ISTLTNDNQWQLNLLATPLPNHIRDTIQRSN 386
           I  + +  +W L+ L +PL  +++D I   N
Sbjct: 293 IQDIWSVGRWHLDTLYSPLSQNLKDNILSYN 323


>gb|ABN08698.1| RNA-directed DNA polymerase ; Ribonuclease H, putative [Medicago
           truncatula]
          Length = 86

 Score = 48.1 bits (113), Expect(2) = 5e-09
 Identities = 18/34 (52%), Positives = 26/34 (76%)
 Frame = -3

Query: 255 WSDLWKLQAPEKIRFFLWLAWHESIPTMQVLHRR 154
           W  +WKL+ PEKI+F +WLA H S+PT+ +L+ R
Sbjct: 13  WVWIWKLKLPEKIKFLVWLACHNSVPTISLLNHR 46



 Score = 37.4 bits (85), Expect(2) = 5e-09
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = -2

Query: 157 KGVAQSASCSRCTGALEENLLHCVRDCTLSRQLWE 53
           + +A +A+CSRC   +E   LHCV DC  S+ +W+
Sbjct: 46  RNIAPTATCSRCNLHVE-TFLHCVHDCHNSKNIWQ 79


>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 869

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/60 (50%), Positives = 40/60 (66%)
 Frame = -3

Query: 333 KDLKYSAKSGFQWLLSNRGGGDLTKPWSDLWKLQAPEKIRFFLWLAWHESIPTMQVLHRR 154
           K+  YSAKSG+QWLLS  G  + T  WS + K +  EK +F +WLA H+S+PT  +LH R
Sbjct: 525 KNGTYSAKSGYQWLLSLSGNDNNTHSWSWILKKKISEKYKFLIWLACHDSLPTAALLHHR 584


>ref|XP_003612606.1| Replication protein A1-like protein [Medicago truncatula]
           gi|355513941|gb|AES95564.1| Replication protein A1-like
           protein [Medicago truncatula]
          Length = 708

 Score = 43.9 bits (102), Expect(2) = 1e-08
 Identities = 20/47 (42%), Positives = 27/47 (57%)
 Frame = -2

Query: 151 VAQSASCSRCTGALEENLLHCVRDCTLSRQLWEKLGMGTANFFRSQD 11
           ++ S  C+RC G   E  LHCVRDC  S+ LW + G    +FF S +
Sbjct: 54  ISHSTVCNRC-GIHNETFLHCVRDCIHSKPLWHQSGFTHPDFFFSNE 99



 Score = 40.0 bits (92), Expect(2) = 1e-08
 Identities = 16/32 (50%), Positives = 23/32 (71%)
 Frame = -3

Query: 255 WSDLWKLQAPEKIRFFLWLAWHESIPTMQVLH 160
           W  +WKL+  EKI+F LWLA H S+ T+ +L+
Sbjct: 19  WIWIWKLKLLEKIKFILWLACHNSVHTISLLN 50