BLASTX nr result

ID: Glycyrrhiza23_contig00024413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024413
         (194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547880.1| PREDICTED: glutamate receptor 3.6-like [Glyc...   120   1e-25
ref|XP_003533407.1| PREDICTED: glutamate receptor 3.6-like [Glyc...   119   3e-25
ref|XP_003517130.1| PREDICTED: glutamate receptor 3.6-like [Glyc...   111   5e-23
ref|XP_003629105.1| Glutamate receptor 3.6 [Medicago truncatula]...   111   7e-23
ref|XP_003537690.1| PREDICTED: glutamate receptor 3.6-like [Glyc...   110   2e-22

>ref|XP_003547880.1| PREDICTED: glutamate receptor 3.6-like [Glycine max]
          Length = 907

 Score =  120 bits (301), Expect = 1e-25
 Identities = 54/64 (84%), Positives = 60/64 (93%)
 Frame = -2

Query: 193 SGLSVVPPEALYSKPANKSSANQKLLPVIWPGETEQKPRGWVFPNNGRLLKIGVPKSVSY 14
           +GLS+VPPEALYSKP N+SSA+QKLLPV+WPGET  KPRGWVFPNNGR+LKIGVPK VSY
Sbjct: 423 TGLSIVPPEALYSKPPNRSSASQKLLPVLWPGETTHKPRGWVFPNNGRMLKIGVPKRVSY 482

Query: 13  REFV 2
           REFV
Sbjct: 483 REFV 486


>ref|XP_003533407.1| PREDICTED: glutamate receptor 3.6-like [Glycine max]
          Length = 938

 Score =  119 bits (298), Expect = 3e-25
 Identities = 53/64 (82%), Positives = 60/64 (93%)
 Frame = -2

Query: 193 SGLSVVPPEALYSKPANKSSANQKLLPVIWPGETEQKPRGWVFPNNGRLLKIGVPKSVSY 14
           +GLS+VPPEALYSKP N+SSA+QKLLPV+WPGET  +PRGWVFPNNGR+LKIGVPK VSY
Sbjct: 423 TGLSIVPPEALYSKPPNRSSASQKLLPVLWPGETTHRPRGWVFPNNGRMLKIGVPKRVSY 482

Query: 13  REFV 2
           REFV
Sbjct: 483 REFV 486


>ref|XP_003517130.1| PREDICTED: glutamate receptor 3.6-like [Glycine max]
          Length = 938

 Score =  111 bits (278), Expect = 5e-23
 Identities = 51/64 (79%), Positives = 55/64 (85%)
 Frame = -2

Query: 193 SGLSVVPPEALYSKPANKSSANQKLLPVIWPGETEQKPRGWVFPNNGRLLKIGVPKSVSY 14
           SGLSVVPPE LYS+PAN S  NQKL P IWPG T ++PRGWVFPNNGRLLKIGVPK VSY
Sbjct: 423 SGLSVVPPETLYSEPANLSRENQKLFPPIWPGNTGERPRGWVFPNNGRLLKIGVPKGVSY 482

Query: 13  REFV 2
           +EFV
Sbjct: 483 KEFV 486


>ref|XP_003629105.1| Glutamate receptor 3.6 [Medicago truncatula]
           gi|355523127|gb|AET03581.1| Glutamate receptor 3.6
           [Medicago truncatula]
          Length = 739

 Score =  111 bits (277), Expect = 7e-23
 Identities = 50/64 (78%), Positives = 55/64 (85%)
 Frame = -2

Query: 193 SGLSVVPPEALYSKPANKSSANQKLLPVIWPGETEQKPRGWVFPNNGRLLKIGVPKSVSY 14
           SGLSV+PPE LYSKP N+S  NQKLL V WPGET Q+PRGWVFPNNG+LLKIGVP+  SY
Sbjct: 222 SGLSVIPPETLYSKPPNRSIDNQKLLTVFWPGETTQRPRGWVFPNNGKLLKIGVPRRTSY 281

Query: 13  REFV 2
           REFV
Sbjct: 282 REFV 285


>ref|XP_003537690.1| PREDICTED: glutamate receptor 3.6-like [Glycine max]
          Length = 938

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/64 (79%), Positives = 54/64 (84%)
 Frame = -2

Query: 193 SGLSVVPPEALYSKPANKSSANQKLLPVIWPGETEQKPRGWVFPNNGRLLKIGVPKSVSY 14
           SGLSVVPPE LYSKPAN S  NQKL   IWPG T ++PRGWVFPNNGRLLKIGVPK VSY
Sbjct: 423 SGLSVVPPETLYSKPANLSRENQKLFAPIWPGNTGERPRGWVFPNNGRLLKIGVPKGVSY 482

Query: 13  REFV 2
           +EFV
Sbjct: 483 KEFV 486