BLASTX nr result

ID: Glycyrrhiza23_contig00024406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024406
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547058.1| PREDICTED: kinetochore protein NDC80 homolog...   216   2e-54
ref|XP_003594432.1| Kinetochore protein NDC80-like protein [Medi...   210   1e-52
emb|CBI23882.3| unnamed protein product [Vitis vinifera]              187   6e-46
ref|XP_002273942.1| PREDICTED: kinetochore protein NDC80 homolog...   187   6e-46
emb|CBI38595.3| unnamed protein product [Vitis vinifera]              184   6e-45

>ref|XP_003547058.1| PREDICTED: kinetochore protein NDC80 homolog [Glycine max]
          Length = 593

 Score =  216 bits (550), Expect = 2e-54
 Identities = 111/135 (82%), Positives = 124/135 (91%)
 Frame = -1

Query: 409 KRSSVGRLEELISLQQKSGENAARLEGKRNQLAAMQSHVDDMEAQLNMIKKETQDYTSRC 230
           K+SS+ +LEE IS QQKSGENA RLEGKRNQLAA+QS +D+MEAQLN IKKET +YTSR 
Sbjct: 404 KKSSMEKLEESISYQQKSGENAVRLEGKRNQLAAVQSRIDEMEAQLNRIKKETHEYTSRA 463

Query: 229 SAEAKKMLEDIQLADHDVDIMEREAAEVLKASELKLQEAIKQSEEEIQMSARELFKLVDS 50
           SAEAKKMLED+QLADH++DIMEREAAEVLK SELKLQE IKQSEEEIQM ARELF+LVDS
Sbjct: 464 SAEAKKMLEDVQLADHEIDIMEREAAEVLKTSELKLQEVIKQSEEEIQMHARELFQLVDS 523

Query: 49  VSKYKEHVGSKISEM 5
           VSK+KEHVGSKISE+
Sbjct: 524 VSKFKEHVGSKISEI 538


>ref|XP_003594432.1| Kinetochore protein NDC80-like protein [Medicago truncatula]
           gi|355483480|gb|AES64683.1| Kinetochore protein
           NDC80-like protein [Medicago truncatula]
          Length = 575

 Score =  210 bits (534), Expect = 1e-52
 Identities = 106/136 (77%), Positives = 124/136 (91%)
 Frame = -1

Query: 409 KRSSVGRLEELISLQQKSGENAARLEGKRNQLAAMQSHVDDMEAQLNMIKKETQDYTSRC 230
           KRSSV +LEEL+SLQ+KS ENAARLEGKRNQLAA+QS +D +E Q +MIKKETQDY +RC
Sbjct: 404 KRSSVVKLEELVSLQKKSAENAARLEGKRNQLAALQSRIDQLETQRDMIKKETQDYRNRC 463

Query: 229 SAEAKKMLEDIQLADHDVDIMEREAAEVLKASELKLQEAIKQSEEEIQMSARELFKLVDS 50
           SAEAKK+ +DIQLADHDV IMEREAAEVLKASELKLQE I+Q++EEIQM A ELFKL+D+
Sbjct: 464 SAEAKKISDDIQLADHDVGIMEREAAEVLKASELKLQETIRQTDEEIQMHAGELFKLIDA 523

Query: 49  VSKYKEHVGSKISEMK 2
           VSKYKEHVGSK+SE++
Sbjct: 524 VSKYKEHVGSKVSEIR 539


>emb|CBI23882.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  187 bits (476), Expect = 6e-46
 Identities = 93/135 (68%), Positives = 120/135 (88%)
 Frame = -1

Query: 406 RSSVGRLEELISLQQKSGENAARLEGKRNQLAAMQSHVDDMEAQLNMIKKETQDYTSRCS 227
           +SS+ +LEELISLQQ+S ENAA++E KRN+LAA+QS  D++EAQLN +KKETQ+YTSRC+
Sbjct: 345 KSSMSKLEELISLQQQSVENAAKIEAKRNRLAALQSRSDEVEAQLNFLKKETQNYTSRCA 404

Query: 226 AEAKKMLEDIQLADHDVDIMEREAAEVLKASELKLQEAIKQSEEEIQMSARELFKLVDSV 47
            EAKK++ED+++  H+VDI+ERE A+VL+ S+LKLQEAIKQ+EEEIQ+ A EL+ LVDSV
Sbjct: 405 MEAKKLVEDVEIETHNVDIVEREVADVLETSKLKLQEAIKQNEEEIQICAWELYALVDSV 464

Query: 46  SKYKEHVGSKISEMK 2
           SKYKEH+ SKISEMK
Sbjct: 465 SKYKEHMASKISEMK 479


>ref|XP_002273942.1| PREDICTED: kinetochore protein NDC80 homolog [Vitis vinifera]
          Length = 571

 Score =  187 bits (476), Expect = 6e-46
 Identities = 93/135 (68%), Positives = 120/135 (88%)
 Frame = -1

Query: 406 RSSVGRLEELISLQQKSGENAARLEGKRNQLAAMQSHVDDMEAQLNMIKKETQDYTSRCS 227
           +SS+ +LEELISLQQ+S ENAA++E KRN+LAA+QS  D++EAQLN +KKETQ+YTSRC+
Sbjct: 407 KSSMSKLEELISLQQQSVENAAKIEAKRNRLAALQSRSDEVEAQLNFLKKETQNYTSRCA 466

Query: 226 AEAKKMLEDIQLADHDVDIMEREAAEVLKASELKLQEAIKQSEEEIQMSARELFKLVDSV 47
            EAKK++ED+++  H+VDI+ERE A+VL+ S+LKLQEAIKQ+EEEIQ+ A EL+ LVDSV
Sbjct: 467 MEAKKLVEDVEIETHNVDIVEREVADVLETSKLKLQEAIKQNEEEIQICAWELYALVDSV 526

Query: 46  SKYKEHVGSKISEMK 2
           SKYKEH+ SKISEMK
Sbjct: 527 SKYKEHMASKISEMK 541


>emb|CBI38595.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  184 bits (467), Expect = 6e-45
 Identities = 92/135 (68%), Positives = 119/135 (88%)
 Frame = -1

Query: 406 RSSVGRLEELISLQQKSGENAARLEGKRNQLAAMQSHVDDMEAQLNMIKKETQDYTSRCS 227
           +SS+ +LEELISLQQ+S ENAA++E KRN+LAA+QS  D++EAQL  +KKE+Q+YTSRC+
Sbjct: 555 KSSMSKLEELISLQQQSVENAAKIEAKRNRLAALQSSSDEVEAQLIFLKKESQNYTSRCA 614

Query: 226 AEAKKMLEDIQLADHDVDIMEREAAEVLKASELKLQEAIKQSEEEIQMSARELFKLVDSV 47
            EAKK++ED+++  H+VDI+ERE A+VL+ S+LKLQEAIKQ+EEEIQM A EL+ LVDSV
Sbjct: 615 TEAKKLVEDVEIETHNVDIVEREVADVLETSKLKLQEAIKQNEEEIQMCAWELYALVDSV 674

Query: 46  SKYKEHVGSKISEMK 2
           SKYKEH+ SKISEMK
Sbjct: 675 SKYKEHMASKISEMK 689


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