BLASTX nr result

ID: Glycyrrhiza23_contig00024395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024395
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526631.1| PREDICTED: photosystem II 22 kDa protein, ch...   108   3e-22
ref|XP_003523444.1| PREDICTED: photosystem II 22 kDa protein, ch...   108   3e-22
gb|ACU23291.1| unknown [Glycine max]                                  108   3e-22
gb|ACU19708.1| unknown [Glycine max]                                  108   3e-22
ref|NP_001238211.1| uncharacterized protein LOC100305885 [Glycin...    91   8e-17

>ref|XP_003526631.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic-like
           [Glycine max]
          Length = 273

 Score =  108 bits (271), Expect = 3e-22
 Identities = 70/137 (51%), Positives = 76/137 (55%)
 Frame = +1

Query: 55  MAKTMLLMSSTVQAGYSIDLKRDSLIQLNSQRLWPKFSPHLFNPLPXXXXXXXXXXXXXX 234
           MA+TMLLMSS V + YS+DLK+D  +QL SQ L PKFS   FNPLP              
Sbjct: 1   MAQTMLLMSS-VSSSYSVDLKKDLFLQLQSQSLRPKFSQLSFNPLPPSTSSFSSPRTFTT 59

Query: 235 XXXLALFXXXXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASL 414
              LALF                    ED            KQNELFVGRVAMLGFAASL
Sbjct: 60  ---LALFKSKTKAAPAKTKVTKPKQKVEDGIFGTSGGFGFTKQNELFVGRVAMLGFAASL 116

Query: 415 LGEAVTGKGILAQLNLE 465
           LGE +TGKGILAQLNLE
Sbjct: 117 LGEGITGKGILAQLNLE 133



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = +1

Query: 358 KQNELFVGRVAMLGFAASLLGEAVTGKGILAQLNLE 465
           K NELFVGR+A LGF  SL+GE +TGKG LAQLN+E
Sbjct: 199 KANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIE 234


>ref|XP_003523444.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic-like
           [Glycine max]
          Length = 273

 Score =  108 bits (271), Expect = 3e-22
 Identities = 70/137 (51%), Positives = 76/137 (55%)
 Frame = +1

Query: 55  MAKTMLLMSSTVQAGYSIDLKRDSLIQLNSQRLWPKFSPHLFNPLPXXXXXXXXXXXXXX 234
           MA+TMLLMSS V + YS+DLK+D  +QL SQ L PKFS   FNPLP              
Sbjct: 1   MAQTMLLMSS-VSSSYSVDLKKDLFLQLQSQSLRPKFSQLSFNPLPSSTSSFSSPRTFTT 59

Query: 235 XXXLALFXXXXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASL 414
              LALF                    ED            KQNELFVGRVAMLGFAASL
Sbjct: 60  ---LALFKSKTKAAPAKTKVTKPKQKVEDGIFGTSGGFGFTKQNELFVGRVAMLGFAASL 116

Query: 415 LGEAVTGKGILAQLNLE 465
           LGE +TGKGILAQLNLE
Sbjct: 117 LGEGITGKGILAQLNLE 133



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = +1

Query: 358 KQNELFVGRVAMLGFAASLLGEAVTGKGILAQLNLE 465
           K NELFVGR+A LGF  SL+GE +TGKG LAQLN+E
Sbjct: 199 KANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIE 234


>gb|ACU23291.1| unknown [Glycine max]
          Length = 273

 Score =  108 bits (271), Expect = 3e-22
 Identities = 70/137 (51%), Positives = 76/137 (55%)
 Frame = +1

Query: 55  MAKTMLLMSSTVQAGYSIDLKRDSLIQLNSQRLWPKFSPHLFNPLPXXXXXXXXXXXXXX 234
           MA+TMLLMSS V + YS+DLK+D  +QL SQ L PKFS   FNPLP              
Sbjct: 1   MAQTMLLMSS-VSSSYSVDLKKDLFLQLQSQSLRPKFSQLSFNPLPSSTSSFSSPRTFTT 59

Query: 235 XXXLALFXXXXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASL 414
              LALF                    ED            KQNELFVGRVAMLGFAASL
Sbjct: 60  ---LALFKSKTKAAPAKTKVTKPKQKVEDGIFGTSGGFGFTKQNELFVGRVAMLGFAASL 116

Query: 415 LGEAVTGKGILAQLNLE 465
           LGE +TGKGILAQLNLE
Sbjct: 117 LGEGITGKGILAQLNLE 133


>gb|ACU19708.1| unknown [Glycine max]
          Length = 273

 Score =  108 bits (271), Expect = 3e-22
 Identities = 70/137 (51%), Positives = 76/137 (55%)
 Frame = +1

Query: 55  MAKTMLLMSSTVQAGYSIDLKRDSLIQLNSQRLWPKFSPHLFNPLPXXXXXXXXXXXXXX 234
           MA+TMLLMSS V + YS+DLK+D  +QL SQ L PKFS   FNPLP              
Sbjct: 1   MAQTMLLMSS-VSSSYSVDLKKDLFLQLQSQSLRPKFSQLSFNPLPPSTSSFSSPRTFTT 59

Query: 235 XXXLALFXXXXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASL 414
              LALF                    ED            KQNELFVGRVAMLGFAASL
Sbjct: 60  ---LALFKSKTKAAPAKTKVTKPKQKVEDGIFGTSGGFGFTKQNELFVGRVAMLGFAASL 116

Query: 415 LGEAVTGKGILAQLNLE 465
           LGE +TGKGILAQLNLE
Sbjct: 117 LGEGITGKGILAQLNLE 133



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = +1

Query: 358 KQNELFVGRVAMLGFAASLLGEAVTGKGILAQLNLE 465
           K NELFVGR+A LGF +SL+GE +TGKG LAQLN+E
Sbjct: 199 KANELFVGRLAQLGFVSSLIGEIITGKGALAQLNIE 234


>ref|NP_001238211.1| uncharacterized protein LOC100305885 [Glycine max]
           gi|255626883|gb|ACU13786.1| unknown [Glycine max]
          Length = 190

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 62/140 (44%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
 Frame = +1

Query: 55  MAKTMLLMSSTV---QAGYSIDLKRDSLIQLNSQRLWPKFSPHLFNPLPXXXXXXXXXXX 225
           MA+T+L +SS+     A YSIDLK+DSLI L +Q L PK S   F PLP           
Sbjct: 1   MAQTVLFLSSSTVPGSANYSIDLKKDSLIHLQNQGLRPKISHLFFVPLPSASYSFSSSSS 60

Query: 226 XXXXXXLALFXXXXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXKQNELFVGRVAMLGFA 405
                 LA F                    ED            K NELFVGRVAMLGF+
Sbjct: 61  RTFITALAFFKTKTPSKVVKSKPKPKV---EDAIFGSSGGFGFTKVNELFVGRVAMLGFS 117

Query: 406 ASLLGEAVTGKGILAQLNLE 465
           A  LGEA+TGKGI+AQLNLE
Sbjct: 118 APSLGEAITGKGIIAQLNLE 137


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