BLASTX nr result

ID: Glycyrrhiza23_contig00024389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024389
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39837.1| unknown [Lotus japonicus]                              163   1e-38
ref|XP_003543181.1| PREDICTED: uncharacterized protein LOC100306...   156   2e-36
ref|XP_003543182.1| PREDICTED: uncharacterized protein LOC100306...   148   4e-34
ref|XP_003638413.1| hypothetical protein MTR_130s0031 [Medicago ...   148   5e-34
ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32

>gb|AFK39837.1| unknown [Lotus japonicus]
          Length = 304

 Score =  163 bits (413), Expect = 1e-38
 Identities = 78/121 (64%), Positives = 91/121 (75%), Gaps = 3/121 (2%)
 Frame = -1

Query: 356 LVWNRPTSCAWATRVCVNSDEACDHGRKEVGLPSLLTRFSKRTTTISKQPRGRVSGFLSM 177
           LVWNRPTSCAWATRV VN+ EAC HGRKEVGLPS + RFSK  T IS+QP+  ++GF +M
Sbjct: 78  LVWNRPTSCAWATRVYVNNGEACYHGRKEVGLPSQMARFSKTITAISRQPKDNMNGFFNM 137

Query: 176 IGVDAIISNPRDHLEVQATEVKCADPEDTFNISL---TVPALSFDQWMGPAIRMSLPSFS 6
           IG  A   NP++HL VQ T+++C D  DT+NISL    V A  FD WMGP IRMSLPSFS
Sbjct: 138 IGTGAKFCNPKEHLNVQETKIRCVDAADTYNISLKSAAVQASRFDHWMGPTIRMSLPSFS 197

Query: 5   G 3
           G
Sbjct: 198 G 198


>ref|XP_003543181.1| PREDICTED: uncharacterized protein LOC100306249 isoform 1 [Glycine
           max]
          Length = 304

 Score =  156 bits (394), Expect = 2e-36
 Identities = 81/122 (66%), Positives = 89/122 (72%), Gaps = 4/122 (3%)
 Frame = -1

Query: 356 LVWNRPTSCAWATRVCVNSDEACDHGRKEVGLPSLLTRFSKRTTTISKQPRGRVSGFLSM 177
           LVWNRPTSCAWATRV VN+DEAC HGRKEVGLPS + RFSK  T IS+Q R   SGFL+ 
Sbjct: 78  LVWNRPTSCAWATRVYVNNDEACYHGRKEVGLPSQMARFSKTITAISRQQREIKSGFLNR 137

Query: 176 IGVDAIISNPRDHLEVQATEVKCADPEDT--FNISLTVP--ALSFDQWMGPAIRMSLPSF 9
           IG+ A  S P+D L VQ T++KC D EDT   NISLT P  AL    WMGP  RMSLPSF
Sbjct: 138 IGIGAKYSTPKDPLNVQVTKIKCLDAEDTCNINISLTSPVSALGIGHWMGPTTRMSLPSF 197

Query: 8   SG 3
           SG
Sbjct: 198 SG 199


>ref|XP_003543182.1| PREDICTED: uncharacterized protein LOC100306249 isoform 2 [Glycine
           max]
          Length = 313

 Score =  148 bits (374), Expect = 4e-34
 Identities = 81/131 (61%), Positives = 89/131 (67%), Gaps = 13/131 (9%)
 Frame = -1

Query: 356 LVWNRPTSCAWATRVCVNSDEACDHGRKEVGLPSLLTRFSK---------RTTTISKQPR 204
           LVWNRPTSCAWATRV VN+DEAC HGRKEVGLPS + RFSK           T IS+Q R
Sbjct: 78  LVWNRPTSCAWATRVYVNNDEACYHGRKEVGLPSQMARFSKVIALTYCIITITAISRQQR 137

Query: 203 GRVSGFLSMIGVDAIISNPRDHLEVQATEVKCADPEDT--FNISLTVP--ALSFDQWMGP 36
              SGFL+ IG+ A  S P+D L VQ T++KC D EDT   NISLT P  AL    WMGP
Sbjct: 138 EIKSGFLNRIGIGAKYSTPKDPLNVQVTKIKCLDAEDTCNINISLTSPVSALGIGHWMGP 197

Query: 35  AIRMSLPSFSG 3
             RMSLPSFSG
Sbjct: 198 TTRMSLPSFSG 208


>ref|XP_003638413.1| hypothetical protein MTR_130s0031 [Medicago truncatula]
           gi|355504348|gb|AES85551.1| hypothetical protein
           MTR_130s0031 [Medicago truncatula]
          Length = 363

 Score =  148 bits (373), Expect = 5e-34
 Identities = 73/121 (60%), Positives = 90/121 (74%), Gaps = 3/121 (2%)
 Frame = -1

Query: 356 LVWNRPTSCAWATRVCVNSDEACDHGRKEVGLPSLLTRFSKRTTTISKQPRGRVSGFLSM 177
           LVWNRPTSCAWATRV VN++EAC HGRK+VGLPS + RFSK  + +S+Q RG  +GF +M
Sbjct: 138 LVWNRPTSCAWATRVYVNNNEACSHGRKDVGLPSQVARFSKTISAVSRQSRG-WNGFSNM 196

Query: 176 IGVDAIISNPRDHLEVQATEVKCADPEDTFNISLT---VPALSFDQWMGPAIRMSLPSFS 6
           + + +   +P DHL VQ TE+K  D  D  +ISLT   VP L FD+WMGP I+MSLPSFS
Sbjct: 197 VQIGSEFRSPNDHLNVQVTEIKSLDAADPCHISLTSAAVPDLRFDRWMGPTIKMSLPSFS 256

Query: 5   G 3
           G
Sbjct: 257 G 257


>ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Vitis vinifera]
          Length = 835

 Score =  142 bits (358), Expect = 3e-32
 Identities = 68/120 (56%), Positives = 88/120 (73%), Gaps = 2/120 (1%)
 Frame = -1

Query: 356 LVWNRPTSCAWATRVCVNSDEACDHGRKEVGLPSLLTRFSKRTTTISKQPRGRVSGFLSM 177
           +VWN PTSCAWA RV VNSDEAC HGRK VGLPS + RFSKR T I +Q R + +GFL+M
Sbjct: 609 IVWNPPTSCAWAARVLVNSDEACVHGRKAVGLPSQVARFSKRITAIPRQQRSKTNGFLNM 668

Query: 176 IGVDAIISNPRDHLEVQATEVKCADPED--TFNISLTVPALSFDQWMGPAIRMSLPSFSG 3
           IG+    ++P+D ++VQ TE++     D  + N++  VP L  ++WMGPAI+MSLPSFSG
Sbjct: 669 IGIGNTFNSPKDCMDVQVTEIEGHTAADACSVNLNTAVPLLKPEKWMGPAIKMSLPSFSG 728


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