BLASTX nr result

ID: Glycyrrhiza23_contig00024353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024353
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   231   2e-58
ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   209   5e-52
ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   206   5e-51
ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula] ...   199   7e-49
ref|XP_003591033.1| 5'-3' exoribonuclease [Medicago truncatula] ...   189   9e-46

>ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 931

 Score =  231 bits (589), Expect = 2e-58
 Identities = 126/201 (62%), Positives = 143/201 (71%), Gaps = 7/201 (3%)
 Frame = -3

Query: 854  GSIAGSQLGEAAHRLVKNTLNIKSNSSSHGLLEQPPVHHTMNRLRPAGPSXXXXXXXXXX 675
            G+IAGSQLGEAAHRLVKNTLNIKSN++SHGLLEQPPVHHTMNR R AG            
Sbjct: 741  GAIAGSQLGEAAHRLVKNTLNIKSNNTSHGLLEQPPVHHTMNRHRSAG---YGKYYGENT 797

Query: 674  XXXXXXXNHHDIMTRPRYPISSNGGQIDRQNFRGQDRPRHQEQLQNVKTGFSA------- 516
                   NHH I TRP+Y     GGQ DRQN + QDR  +QEQ  N K+ F A       
Sbjct: 798  SGYYGQYNHHGI-TRPKY-----GGQNDRQNLKIQDRLHNQEQFHNTKSEFVALTMEEGE 851

Query: 515  RPKSSRLPNSGPTTNLEPRFVQNVGPRIPSPKWITKAPPVNGVYTRHQEAALGAVPHDKQ 336
            RP+SSRLPNS P TNL+PRF+QN+ P IP PKW+T+ PP+NG++TRHQEAALG   HDKQ
Sbjct: 852  RPRSSRLPNSRPVTNLQPRFMQNMDPSIPPPKWMTRTPPMNGMHTRHQEAALGPATHDKQ 911

Query: 335  TKKVYQVKTRLPQDTPDCGNQ 273
            TKKVYQVKTR P DTP+ G Q
Sbjct: 912  TKKVYQVKTRQP-DTPEYGKQ 931


>ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 957

 Score =  209 bits (533), Expect = 5e-52
 Identities = 116/215 (53%), Positives = 137/215 (63%), Gaps = 21/215 (9%)
 Frame = -3

Query: 854  GSIAGSQLGEAAHRLVKNTLNIKSNSSSHGLLEQPPVHHTMNRLRPAGPSXXXXXXXXXX 675
            G++AG QLGEAAHRLVKN+LNIKSN+  +G  EQ P HH MNRLR AGPS          
Sbjct: 744  GAMAGPQLGEAAHRLVKNSLNIKSNNMPYGSPEQFPGHHAMNRLRSAGPSGYGKYYVEDK 803

Query: 674  XXXXXXXNHHD-IMTRPRYPISSNGGQIDRQNFRGQDRPRHQEQLQNVKTGF-------S 519
                   N+H  ++TRPRYP+SSNGG  ++QNFR QDR +H EQ  N +TGF        
Sbjct: 804  SGYYGQQNNHQGMITRPRYPVSSNGGNNEKQNFRIQDRSQHHEQYYNGRTGFHTMTMEEG 863

Query: 518  ARPKS-------------SRLPNSGPTTNLEPRFVQNVGPRIPSPKWITKAPPVNGVYTR 378
            ARP+              SR PNSGPTTN + +FVQN+GP IP P WIT+AP  NG+Y  
Sbjct: 864  ARPRPYAVPSPRTQVVMLSRSPNSGPTTNGQHQFVQNMGPPIPPPNWITRAPDTNGIYAW 923

Query: 377  HQEAALGAVPHDKQTKKVYQVKTRLPQDTPDCGNQ 273
            HQE ALG   +DKQ  KVYQ KTR PQD P+ GNQ
Sbjct: 924  HQETALGGA-YDKQHIKVYQAKTRQPQDMPEYGNQ 957


>ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 960

 Score =  206 bits (524), Expect = 5e-51
 Identities = 115/215 (53%), Positives = 133/215 (61%), Gaps = 21/215 (9%)
 Frame = -3

Query: 854  GSIAGSQLGEAAHRLVKNTLNIKSNSSSHGLLEQPPVHHTMNRLRPAGPSXXXXXXXXXX 675
            G++AG QLGEAAHRLVKN+LNIKSN+  +G  EQ P HH MNRLR AGPS          
Sbjct: 747  GAMAGPQLGEAAHRLVKNSLNIKSNNMPYGSPEQFPGHHAMNRLRSAGPSGSGKYYGEDT 806

Query: 674  XXXXXXXNHHD-IMTRPRYPISSNGGQIDRQNFRGQDRPRHQEQLQNVKTGF-------- 522
                    +H  I+TRPRYP+SSNGG  D+QNFR QDR  H +Q  N  TGF        
Sbjct: 807  SGYYGQHYNHQGIITRPRYPVSSNGGHNDKQNFRIQDRSYHHDQYYNGTTGFYTMAMEEG 866

Query: 521  -SARPKS-----------SRLPNSGPTTNLEPRFVQNVGPRIPSPKWITKAPPVNGVYTR 378
              ARP +           SR PNSG TTN + +FVQN+GP IP P WIT+ P  NG+Y  
Sbjct: 867  ARARPYAVPLPRTPAVTLSRPPNSGSTTNGQHQFVQNMGPPIPPPNWITRVPDTNGIYAG 926

Query: 377  HQEAALGAVPHDKQTKKVYQVKTRLPQDTPDCGNQ 273
            HQE ALG   +DKQ  KVYQVKTR PQD P+ GNQ
Sbjct: 927  HQETALGGT-YDKQNMKVYQVKTRQPQDMPEYGNQ 960


>ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula]
            gi|355501405|gb|AES82608.1| 5'-3' exoribonuclease
            [Medicago truncatula]
          Length = 956

 Score =  199 bits (506), Expect = 7e-49
 Identities = 111/215 (51%), Positives = 135/215 (62%), Gaps = 21/215 (9%)
 Frame = -3

Query: 854  GSIAGSQLGEAAHRLVKNTLNIKSNSSSHGLLEQPPVHHTMNRLRPAGPSXXXXXXXXXX 675
            G+IAG QLGEAAHRLV+N+L   +N+S     +Q P  HTMNR+RP G S          
Sbjct: 745  GAIAGPQLGEAAHRLVRNSLQFNNNTSYP---DQFPSQHTMNRVRPTGASGSGKYYGEES 801

Query: 674  XXXXXXXNH-HDIMTRPRYPISSNGGQIDRQNFRGQDRPRHQEQLQNVKTGFSA------ 516
                    +   +MTRPR+PI+SNG Q DRQN R QDR +H EQ  N+KTGF A      
Sbjct: 802  SGYYGQNYNPQGMMTRPRFPIASNGWQNDRQNIRIQDRSQHHEQFHNMKTGFQALTIDEG 861

Query: 515  -RPKSSRLP-------------NSGPTTNLEPRFVQNVGPRIPSPKWITKAPPVNGVYTR 378
             RP+SS +P             NSG TTNL+P+FVQN+GP IP P WI+KAP  NG+Y R
Sbjct: 862  VRPRSSAVPSPKTPAMMLMRPQNSGHTTNLQPQFVQNIGPPIPPPNWISKAPDTNGMYAR 921

Query: 377  HQEAALGAVPHDKQTKKVYQVKTRLPQDTPDCGNQ 273
            HQEAA+G   +DK  KKVYQ+KTR PQD P+ GNQ
Sbjct: 922  HQEAAVGGA-YDKPIKKVYQIKTRNPQDMPEQGNQ 955


>ref|XP_003591033.1| 5'-3' exoribonuclease [Medicago truncatula]
            gi|355480081|gb|AES61284.1| 5'-3' exoribonuclease
            [Medicago truncatula]
          Length = 1029

 Score =  189 bits (479), Expect = 9e-46
 Identities = 102/170 (60%), Positives = 113/170 (66%)
 Frame = -3

Query: 854  GSIAGSQLGEAAHRLVKNTLNIKSNSSSHGLLEQPPVHHTMNRLRPAGPSXXXXXXXXXX 675
            G+I GSQLGEAAHRLVKNTLNIK N++SHG+LEQPPV HT NR + AGPS          
Sbjct: 753  GAITGSQLGEAAHRLVKNTLNIKWNNTSHGVLEQPPVRHTTNRFQSAGPSRYGKYSGENT 812

Query: 674  XXXXXXXNHHDIMTRPRYPISSNGGQIDRQNFRGQDRPRHQEQLQNVKTGFSARPKSSRL 495
                   NHH  MTR RYP+SSN GQ+DRQNFR QDRPRHQEQ QNVKTGFSA     R+
Sbjct: 813  NSYYGEHNHHGAMTRHRYPVSSNAGQVDRQNFRTQDRPRHQEQFQNVKTGFSALTNGGRI 872

Query: 494  PNSGPTTNLEPRFVQNVGPRIPSPKWITKAPPVNGVYTRHQEAALGAVPH 345
                 T  +E     N GP +   KW TKA P+NGVY R QEAA G VPH
Sbjct: 873  ----ETCTIE----ANSGPPVRPLKWNTKA-PINGVYPRRQEAASGVVPH 913


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