BLASTX nr result

ID: Glycyrrhiza23_contig00024339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024339
         (874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535305.1| conserved hypothetical protein [Ricinus comm...   148   2e-78
ref|XP_003588296.1| hypothetical protein MTR_1g005540 [Medicago ...   114   4e-23
ref|YP_173422.1| hypothetical protein NitaMp080 [Nicotiana tabac...   106   6e-21
ref|YP_002608359.1| orf104 [Vitis vinifera] gi|209954156|emb|CAQ...   104   3e-20
ref|YP_005090415.1| orf3 gene product (mitochondrion) [Boea hygr...   100   6e-19

>ref|XP_002535305.1| conserved hypothetical protein [Ricinus communis]
           gi|223523491|gb|EEF27078.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score =  148 bits (373), Expect(5) = 2e-78
 Identities = 68/74 (91%), Positives = 68/74 (91%)
 Frame = +3

Query: 195 RSRTLQVWERSWSGKAKTAPRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSAPLYRLNH 374
           R   L VWERSWSGKAKTAPRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSAPLYRLNH
Sbjct: 37  RGDILDVWERSWSGKAKTAPRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSAPLYRLNH 96

Query: 375 SKSLVGGTGEPREL 416
           S  LVGGTGEPREL
Sbjct: 97  SNGLVGGTGEPREL 110



 Score = 74.7 bits (182), Expect(5) = 2e-78
 Identities = 34/38 (89%), Positives = 35/38 (92%)
 Frame = +3

Query: 648 RRGSQYLFFQACSDIRFPRKIKLVSRVMGNLPARFGEH 761
           R+   YLFFQACSDIRFPRKIKLVSRVMGNLPARFGEH
Sbjct: 146 RKAGSYLFFQACSDIRFPRKIKLVSRVMGNLPARFGEH 183



 Score = 68.6 bits (166), Expect(5) = 2e-78
 Identities = 34/39 (87%), Positives = 35/39 (89%)
 Frame = +1

Query: 508 RKACTPYLRLLRQAVDSFIREGKKGPKHGGCRTLEWQRK 624
           R+ACT  LRLLRQAVDSFIREGKKGPKH  CRTLEWQRK
Sbjct: 111 RQACT--LRLLRQAVDSFIREGKKGPKHLRCRTLEWQRK 147



 Score = 59.3 bits (142), Expect(5) = 2e-78
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +1

Query: 7  MNCRVDRSDPDAAVAPRRYGLDPLLPPRG 93
          MNCRVDRSDPDAAVAPRRYGLDPLLP  G
Sbjct: 1  MNCRVDRSDPDAAVAPRRYGLDPLLPIPG 29



 Score = 31.6 bits (70), Expect(5) = 2e-78
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = +2

Query: 83  PPGGHHSMSGIRGDIKDV 136
           P  G+HSMSGIRGDI DV
Sbjct: 26  PIPGYHSMSGIRGDILDV 43


>ref|XP_003588296.1| hypothetical protein MTR_1g005540 [Medicago truncatula]
           gi|355477344|gb|AES58547.1| hypothetical protein
           MTR_1g005540 [Medicago truncatula]
          Length = 90

 Score =  114 bits (284), Expect = 4e-23
 Identities = 54/55 (98%), Positives = 54/55 (98%)
 Frame = -1

Query: 415 SSRGSPVPPTRLLE*FSRYRGALEVGGVLSLLGWALPHKAPPSGHKRPLATHMRG 251
           SSRGSPVPPTRLLE FSRYRGALEVGGVLSLLGWALPHKAPPSGHKRPLATHMRG
Sbjct: 34  SSRGSPVPPTRLLELFSRYRGALEVGGVLSLLGWALPHKAPPSGHKRPLATHMRG 88



 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 39/84 (46%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
 Frame = -2

Query: 495 GDSLPKRRKGWIKKRGYYEPSAPRI-------*PARVVHRFHRLDS*SDSVDTEVRLKWG 337
           GDSLPKRRKGWIKKRGYYEPSAPRI        P R++  F R     +       L W 
Sbjct: 9   GDSLPKRRKGWIKKRGYYEPSAPRISSRGSPVPPTRLLELFSRYRGALEVGGVLSLLGWA 68

Query: 336 VCCPYWAGPF----PIRPHRRGIS 277
           +  P+ A P     P+  H RG S
Sbjct: 69  L--PHKAPPSGHKRPLATHMRGRS 90


>ref|YP_173422.1| hypothetical protein NitaMp080 [Nicotiana tabacum]
           gi|56806586|dbj|BAD83487.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 103

 Score =  106 bits (265), Expect = 6e-21
 Identities = 58/87 (66%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
 Frame = -1

Query: 259 MRGAVLAFPDQDRSHTCSVRDRPTQLCIDRKAGRHSPQGSGYVLYV-PPYSRHAMXXXXX 83
           MRGAVLAFPDQDRSHTCSVRDRP QLCIDRKAGRHSPQ   ++  V PP           
Sbjct: 1   MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFPTCYGTPEW 60

Query: 82  XXXXXXXXXAEQQPRPDLIYLLGNSSG 2
                    AEQQPRPDLIYLLGNSSG
Sbjct: 61  VGAGRVRIAAEQQPRPDLIYLLGNSSG 87


>ref|YP_002608359.1| orf104 [Vitis vinifera] gi|209954156|emb|CAQ77593.1| orf104 [Vitis
           vinifera] gi|239764779|gb|ACS15247.1| ORF104 [Vitis
           vinifera]
          Length = 103

 Score =  104 bits (259), Expect = 3e-20
 Identities = 57/87 (65%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
 Frame = -1

Query: 259 MRGAVLAFPDQDRSHTCSVRDRPTQLCIDRKAGRHSPQGSGYVLYV-PPYSRHAMXXXXX 83
           MRGAVLA PDQDRSHTCSVRDRP QLCIDRKAGRHSPQ   ++  V PP           
Sbjct: 1   MRGAVLALPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFPTCYGAPGW 60

Query: 82  XXXXXXXXXAEQQPRPDLIYLLGNSSG 2
                    AEQQPRPDLIYLLGNSSG
Sbjct: 61  IGAGRVRIAAEQQPRPDLIYLLGNSSG 87


>ref|YP_005090415.1| orf3 gene product (mitochondrion) [Boea hygrometrica]
           gi|340549503|gb|AEK53324.1| hypothetical protein
           (mitochondrion) [Boea hygrometrica]
          Length = 103

 Score =  100 bits (248), Expect = 6e-19
 Identities = 55/86 (63%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
 Frame = -1

Query: 259 MRGAVLAFPDQDRSHTCSVRDRPTQLCIDRKAGRHSPQGSGYVLYV-PPYSRHAMXXXXX 83
           MRGAVLAFPDQDRSHTCSVRDRP QLCIDR+ GRHSPQ    +  V PP           
Sbjct: 1   MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRRGGRHSPQQRECLRPVCPPLFPTCYGAPGW 60

Query: 82  XXXXXXXXXAEQQPRPDLIYLLGNSS 5
                    AEQQPRPDLIYLLGNSS
Sbjct: 61  VGAGRARSAAEQQPRPDLIYLLGNSS 86


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