BLASTX nr result

ID: Glycyrrhiza23_contig00024318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024318
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236385.1| uncharacterized protein LOC100306277 [Glycin...   114   8e-24
gb|AFK34960.1| unknown [Lotus japonicus]                              110   1e-22
ref|NP_001235586.1| uncharacterized protein LOC100527659 [Glycin...   105   3e-21
gb|AFK39086.1| unknown [Medicago truncatula] gi|388516043|gb|AFK...   105   5e-21
ref|XP_003598543.1| Transcription initiation factor TFIID subuni...   103   2e-20

>ref|NP_001236385.1| uncharacterized protein LOC100306277 [Glycine max]
           gi|255628079|gb|ACU14384.1| unknown [Glycine max]
          Length = 177

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/82 (67%), Positives = 62/82 (75%)
 Frame = -3

Query: 435 NRNKMPFPKTVAVPGFPLPPDQDTLISPNYQFAIPNTRPSXXXXXXXXXEAANPSSSQEE 256
           NRNK+P PKT+A PG PLPPDQDTLISPNYQFAIPN RP+         EA  P+ SQE+
Sbjct: 96  NRNKIPLPKTIAGPGIPLPPDQDTLISPNYQFAIPNKRPAQPLEETEDEEATIPNPSQEQ 155

Query: 255 KIDMQLDPPQRVSFPLPKHQKD 190
           K+D Q +P QRVSFPLPK QKD
Sbjct: 156 KVDTQPNPHQRVSFPLPKRQKD 177


>gb|AFK34960.1| unknown [Lotus japonicus]
          Length = 183

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/81 (66%), Positives = 60/81 (74%)
 Frame = -3

Query: 435 NRNKMPFPKTVAVPGFPLPPDQDTLISPNYQFAIPNTRPSXXXXXXXXXEAANPSSSQEE 256
           NRNK+P PKT+A PG PLPPDQDTLISPNYQFAIPN RP+         EA   + SQEE
Sbjct: 96  NRNKIPLPKTIAGPGVPLPPDQDTLISPNYQFAIPNKRPAEPIEDTEVEEATTSNPSQEE 155

Query: 255 KIDMQLDPPQRVSFPLPKHQK 193
           K D+Q +P QRVSFPLPK QK
Sbjct: 156 KTDVQQNPNQRVSFPLPKRQK 176


>ref|NP_001235586.1| uncharacterized protein LOC100527659 [Glycine max]
           gi|255632872|gb|ACU16789.1| unknown [Glycine max]
          Length = 174

 Score =  105 bits (263), Expect = 3e-21
 Identities = 54/82 (65%), Positives = 60/82 (73%)
 Frame = -3

Query: 435 NRNKMPFPKTVAVPGFPLPPDQDTLISPNYQFAIPNTRPSXXXXXXXXXEAANPSSSQEE 256
           NRNK+P PKT+A PG PLPPDQDTLISPNYQFAIPN RP+         EA  P+ SQE 
Sbjct: 96  NRNKIPLPKTIAGPGIPLPPDQDTLISPNYQFAIPNKRPAEPLEETEDEEATIPNPSQE- 154

Query: 255 KIDMQLDPPQRVSFPLPKHQKD 190
             D+Q +P QRVSFPLPK QKD
Sbjct: 155 --DVQPNPHQRVSFPLPKRQKD 174


>gb|AFK39086.1| unknown [Medicago truncatula] gi|388516043|gb|AFK46083.1| unknown
           [Medicago truncatula]
          Length = 179

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/84 (63%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
 Frame = -3

Query: 435 NRNKMPFPKTVAVPGFPLPPDQDTLISPNYQFAIPNTRPSXXXXXXXXXEA--ANPSSSQ 262
           NRNK+P PK++A PGFPLPPDQDTLI+PNYQFAIPN R           E   A+P+ SQ
Sbjct: 96  NRNKIPLPKSIAGPGFPLPPDQDTLIAPNYQFAIPNKRSVEPMEETEDEEVPNADPNPSQ 155

Query: 261 EEKIDMQLDPPQRVSFPLPKHQKD 190
           EEK D + +P QRVSFPLPK QKD
Sbjct: 156 EEKTDAEQNPHQRVSFPLPKRQKD 179


>ref|XP_003598543.1| Transcription initiation factor TFIID subunit [Medicago truncatula]
           gi|355487591|gb|AES68794.1| Transcription initiation
           factor TFIID subunit [Medicago truncatula]
          Length = 179

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/84 (63%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
 Frame = -3

Query: 435 NRNKMPFPKTVAVPGFPLPPDQDTLISPNYQFAIPNTRPSXXXXXXXXXEA--ANPSSSQ 262
           NRNK+P PK++A PGFPL PDQDTLI+PNYQFAIPN R           E   A+P+ SQ
Sbjct: 96  NRNKIPLPKSIAGPGFPLSPDQDTLIAPNYQFAIPNKRSVEPMEETEDEEVPNADPNPSQ 155

Query: 261 EEKIDMQLDPPQRVSFPLPKHQKD 190
           EEK D Q +P QRVSFPLPK QKD
Sbjct: 156 EEKTDAQQNPHQRVSFPLPKRQKD 179


Top