BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024305
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626687.1| Pentatricopeptide repeat-containing protein ...   213   1e-53
ref|XP_003595941.1| Pentatricopeptide repeat-containing protein ...   212   3e-53
ref|XP_002267809.2| PREDICTED: pentatricopeptide repeat-containi...   173   2e-41
emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]   173   2e-41
ref|XP_003530173.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   163   2e-38

>ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355520709|gb|AET01163.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 501

 Score =  213 bits (543), Expect = 1e-53
 Identities = 119/167 (71%), Positives = 130/167 (77%), Gaps = 10/167 (5%)
 Frame = -2

Query: 477 MGKIPPSFRSAISNPNLINPSSVL--PSPKPHHFPKKIPSHFPGKSRKPXXXXXXQE--- 313
           MGKIPPSFRSA+SNPNLI+ SS L   SPKPHHFP K        +RKP       +   
Sbjct: 1   MGKIPPSFRSALSNPNLIHRSSSLIPSSPKPHHFPNK--------TRKPHQKQQQSQSQS 52

Query: 312 --PKPVAVFKSPSLQDAKSIFNSIVNRSNAPIDDARFHNSLLQSYASISTTNDSIAFLRH 139
             PKPV+VFKSP+LQ+AKSIFNS VN SNAPID +RFHNSLLQSYASIST NDSIAFLRH
Sbjct: 53  QSPKPVSVFKSPNLQEAKSIFNSFVNSSNAPID-SRFHNSLLQSYASISTINDSIAFLRH 111

Query: 138 MTKTLPSFSPDRSTYHILLSHSCKSPD---STLSPLHQTLNLMVSDG 7
           MTKT PSFSPD+STYHILL+H CKS D   STLS +HQTLNLMVSDG
Sbjct: 112 MTKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDG 158


>ref|XP_003595941.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484989|gb|AES66192.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  212 bits (539), Expect = 3e-53
 Identities = 118/168 (70%), Positives = 130/168 (77%), Gaps = 10/168 (5%)
 Frame = -2

Query: 480 EMGKIPPSFRSAISNPNLINPSSVL--PSPKPHHFPKKIPSHFPGKSRKPXXXXXXQE-- 313
           + GKIPPSFRSA+SNPNLI+ SS L   SPKPHHFP K        +RKP       +  
Sbjct: 16  QYGKIPPSFRSALSNPNLIHRSSSLIPSSPKPHHFPNK--------TRKPHQKQQQSQSQ 67

Query: 312 ---PKPVAVFKSPSLQDAKSIFNSIVNRSNAPIDDARFHNSLLQSYASISTTNDSIAFLR 142
              PKPV+VFKSP+LQ+AKSIFNS VN SNAPID +RFHNSLLQSYASIST NDSIAFLR
Sbjct: 68  SQSPKPVSVFKSPNLQEAKSIFNSFVNSSNAPID-SRFHNSLLQSYASISTINDSIAFLR 126

Query: 141 HMTKTLPSFSPDRSTYHILLSHSCKSPD---STLSPLHQTLNLMVSDG 7
           HMTKT PSFSPD+STYHILL+H CKS D   STLS +HQTLNLMVSDG
Sbjct: 127 HMTKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDG 174


>ref|XP_002267809.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like [Vitis vinifera]
          Length = 458

 Score =  173 bits (438), Expect = 2e-41
 Identities = 97/168 (57%), Positives = 119/168 (70%), Gaps = 10/168 (5%)
 Frame = -2

Query: 480 EMGKIPPSFRSA-------ISNPNLINP--SSVLPSP-KPHHFPKKIPSHFPGKSRKPXX 331
           +MGKIPPSFR++       + NP  + P  S+VL +P KPHHFPKK P    GK++K   
Sbjct: 68  KMGKIPPSFRTSTVPVTTLLKNPPAVLPKQSTVLETPQKPHHFPKKRPQP-SGKTKKTRT 126

Query: 330 XXXXQEPKPVAVFKSPSLQDAKSIFNSIVNRSNAPIDDARFHNSLLQSYASISTTNDSIA 151
                +PK   +F SP+L DAK +F SI   S  P+D  RFHN+LLQSY+SIST NDSI+
Sbjct: 127 PIE--DPKSPVIFNSPNLLDAKKLFASITTTSTTPLD-FRFHNALLQSYSSISTVNDSIS 183

Query: 150 FLRHMTKTLPSFSPDRSTYHILLSHSCKSPDSTLSPLHQTLNLMVSDG 7
           FLRHM K+ PSFSP+RSTYHILLS SCKSP+S LS +HQTLNLMV+ G
Sbjct: 184 FLRHMIKSQPSFSPERSTYHILLSQSCKSPNSDLSAVHQTLNLMVTHG 231


>emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
          Length = 472

 Score =  173 bits (438), Expect = 2e-41
 Identities = 97/167 (58%), Positives = 118/167 (70%), Gaps = 10/167 (5%)
 Frame = -2

Query: 477 MGKIPPSFRSA-------ISNPNLINP--SSVLPSP-KPHHFPKKIPSHFPGKSRKPXXX 328
           MGKIPPSFR++       + NP  + P  S+VL +P KPHHFPKK P    GK++K    
Sbjct: 1   MGKIPPSFRTSTVPVTTLLKNPPAVLPKQSTVLETPQKPHHFPKKRPQP-SGKTKKTRTP 59

Query: 327 XXXQEPKPVAVFKSPSLQDAKSIFNSIVNRSNAPIDDARFHNSLLQSYASISTTNDSIAF 148
               +PK   +F SP+L DAK +F SI   S  P+D  RFHN+LLQSY+SIST NDSI+F
Sbjct: 60  IE--DPKSPVIFNSPNLLDAKKLFASITTTSTTPLD-LRFHNALLQSYSSISTVNDSISF 116

Query: 147 LRHMTKTLPSFSPDRSTYHILLSHSCKSPDSTLSPLHQTLNLMVSDG 7
           LRHM K+ PSFSP+RSTYHILLS SCKSP+S LS +HQTLNLMV+ G
Sbjct: 117 LRHMIKSQPSFSPERSTYHILLSQSCKSPNSDLSAVHQTLNLMVTHG 163


>ref|XP_003530173.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g17670-like [Glycine max]
          Length = 456

 Score =  163 bits (412), Expect = 2e-38
 Identities = 92/160 (57%), Positives = 114/160 (71%), Gaps = 1/160 (0%)
 Frame = -2

Query: 477 MGKIPPSFRSAISNPNLINPSSVLPSPKPHHFPKKIPSHFPGKSRKPXXXXXXQEPKPVA 298
           MGKIPPSFRSAI+NPNL NPSS+   P+PHHFP K       + RKP       +P  + 
Sbjct: 1   MGKIPPSFRSAIANPNLRNPSSLF-RPQPHHFPNKHQ-----QPRKPSKQQQ--KPSSLP 52

Query: 297 VFKSPSLQDAKSIFNSIVNRSNAPIDDARFHNSLLQSYASISTT-NDSIAFLRHMTKTLP 121
           +FKSP+L+DAK +FNSI N S+ P    RF NSLL SYA ++TT +DSI F  H+TKTLP
Sbjct: 53  LFKSPNLEDAKKLFNSIANSSSDP----RFPNSLLHSYAKLATTPSDSIKFFNHITKTLP 108

Query: 120 SFSPDRSTYHILLSHSCKSPDSTLSPLHQTLNLMVSDGQT 1
           SFSPDRST+HILLSH+  +  + LSP+HQ LNLM++ G T
Sbjct: 109 SFSPDRSTFHILLSHASNN-SNLLSPIHQXLNLMLAAGIT 147