BLASTX nr result

ID: Glycyrrhiza23_contig00024288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024288
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago t...   362   5e-98
ref|XP_003526329.1| PREDICTED: uncharacterized protein LOC100791...   355   6e-96
ref|XP_004159228.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   285   6e-75
ref|XP_004144590.1| PREDICTED: uncharacterized protein LOC101204...   285   6e-75
ref|XP_002881226.1| hypothetical protein ARALYDRAFT_320982 [Arab...   273   2e-71

>ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
            gi|355506989|gb|AES88131.1| Exosome complex exonuclease
            RRP6 [Medicago truncatula]
          Length = 974

 Score =  362 bits (928), Expect = 5e-98
 Identities = 177/223 (79%), Positives = 195/223 (87%)
 Frame = -3

Query: 671  ETQFQYTVRQLCAWRDLMARIHDESLKYVLSDQATVTLASQPPASRSEIYDTIVQTDINV 492
            ETQF   VRQLC WRDLMARIHDESLKYVLSDQA V LAS+ PAS SEIY++IVQTD+N 
Sbjct: 389  ETQFLSIVRQLCTWRDLMARIHDESLKYVLSDQAIVALASRLPASNSEIYNSIVQTDVNA 448

Query: 491  EMGLNSFIXXXXXXXXSHLSDIYHLLANELVNHGDIYSNILQKCLGQNGSCKLNIFNYAL 312
            E GL+S I        SHL+DI HLLAN+LVNHGDIYS ILQKCLGQNG+CKLNI NYAL
Sbjct: 449  ETGLSSSIPSPSPVVCSHLTDICHLLANKLVNHGDIYSVILQKCLGQNGNCKLNISNYAL 508

Query: 311  LVNSNLRPTLAYKHSSLKNPRQFTRKASRDLFVQKFSCKSPVYHNCRIYANDGRMLCYCD 132
            LVN N+RPTL+ K SSLKNPRQ ++KASR+LFV+KFSCKSPVYHNCRI+ANDGR+LCYCD
Sbjct: 509  LVNCNVRPTLSSKRSSLKNPRQHSKKASRNLFVKKFSCKSPVYHNCRIFANDGRLLCYCD 568

Query: 131  RKKLEWYLIRDLAKLIDEEPPAIMLLFEPKGRPEDEDNDFYIQ 3
            RKKLEWYL RDLAK++DEEPPAIMLLFEPKGRPEDE NDFYIQ
Sbjct: 569  RKKLEWYLSRDLAKVVDEEPPAIMLLFEPKGRPEDEGNDFYIQ 611


>ref|XP_003526329.1| PREDICTED: uncharacterized protein LOC100791485 [Glycine max]
          Length = 873

 Score =  355 bits (910), Expect = 6e-96
 Identities = 177/219 (80%), Positives = 188/219 (85%)
 Frame = -3

Query: 659  QYTVRQLCAWRDLMARIHDESLKYVLSDQATVTLASQPPASRSEIYDTIVQTDINVEMGL 480
            Q  VRQLC WRDLMARIHDESLKYVLSDQA V LASQP AS SEIY+TI Q DIN+EMG+
Sbjct: 352  QNIVRQLCTWRDLMARIHDESLKYVLSDQAIVALASQPSASHSEIYNTIAQADINMEMGV 411

Query: 479  NSFIXXXXXXXXSHLSDIYHLLANELVNHGDIYSNILQKCLGQNGSCKLNIFNYALLVNS 300
            N  I        SHLSDIYHLLAN+L N  DIYS ILQKCLGQNGSC L+IFNYALLVNS
Sbjct: 412  NPLIPSPSPVVCSHLSDIYHLLANKLDN--DIYSVILQKCLGQNGSCPLSIFNYALLVNS 469

Query: 299  NLRPTLAYKHSSLKNPRQFTRKASRDLFVQKFSCKSPVYHNCRIYANDGRMLCYCDRKKL 120
            NLRPTLAYK    KNP+Q++RKASRDLFV+KFSCKS VYHNCRIYANDGR+LCYCDR+KL
Sbjct: 470  NLRPTLAYKQPGPKNPKQYSRKASRDLFVKKFSCKSAVYHNCRIYANDGRLLCYCDRRKL 529

Query: 119  EWYLIRDLAKLIDEEPPAIMLLFEPKGRPEDEDNDFYIQ 3
            EWYL RDLAKLIDEEPPAIMLLFEPKGRPEDE NDFYIQ
Sbjct: 530  EWYLSRDLAKLIDEEPPAIMLLFEPKGRPEDEGNDFYIQ 568


>ref|XP_004159228.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101225221
            [Cucumis sativus]
          Length = 877

 Score =  285 bits (729), Expect = 6e-75
 Identities = 137/219 (62%), Positives = 168/219 (76%)
 Frame = -3

Query: 659  QYTVRQLCAWRDLMARIHDESLKYVLSDQATVTLASQPPASRSEIYDTIVQTDINVEMGL 480
            Q  VR+LCAWRDLMAR+HDESL+YVLSDQA V +A Q P +  E+Y TI Q D+NV++  
Sbjct: 346  QDRVRRLCAWRDLMARVHDESLRYVLSDQAIVAIAIQVPKNTGELYATIAQVDLNVDLSS 405

Query: 479  NSFIXXXXXXXXSHLSDIYHLLANELVNHGDIYSNILQKCLGQNGSCKLNIFNYALLVNS 300
            + F+        SHL DI+ LL +   +  +I+  ILQ C+G NGSC L+IFNYALLV  
Sbjct: 406  SLFLPSPSSVVCSHLDDIHCLLHDNFGDLDNIFLVILQNCIGSNGSCPLSIFNYALLVKY 465

Query: 299  NLRPTLAYKHSSLKNPRQFTRKASRDLFVQKFSCKSPVYHNCRIYANDGRMLCYCDRKKL 120
            NL+     KH+  KN +Q ++KASR+LFVQKFSCKSPVYHNCRIYANDGR+LCYCDR+KL
Sbjct: 466  NLKMMTISKHNDRKNAKQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKL 525

Query: 119  EWYLIRDLAKLIDEEPPAIMLLFEPKGRPEDEDNDFYIQ 3
            EWYL R+LA+L+ ++PPAI LLFEPKGRPEDE NDFYIQ
Sbjct: 526  EWYLRRELAELVADDPPAIKLLFEPKGRPEDEGNDFYIQ 564


>ref|XP_004144590.1| PREDICTED: uncharacterized protein LOC101204374 [Cucumis sativus]
          Length = 877

 Score =  285 bits (729), Expect = 6e-75
 Identities = 137/219 (62%), Positives = 168/219 (76%)
 Frame = -3

Query: 659  QYTVRQLCAWRDLMARIHDESLKYVLSDQATVTLASQPPASRSEIYDTIVQTDINVEMGL 480
            Q  VR+LCAWRDLMAR+HDESL+YVLSDQA V +A Q P +  E+Y TI Q D+NV++  
Sbjct: 346  QDRVRRLCAWRDLMARVHDESLRYVLSDQAIVAIAIQVPKNTGELYATIAQVDLNVDLSS 405

Query: 479  NSFIXXXXXXXXSHLSDIYHLLANELVNHGDIYSNILQKCLGQNGSCKLNIFNYALLVNS 300
            + F+        SHL DI+ LL +   +  +I+  ILQ C+G NGSC L+IFNYALLV  
Sbjct: 406  SLFLPSPSSVVCSHLDDIHCLLHDNFGDLDNIFLVILQNCIGSNGSCPLSIFNYALLVKY 465

Query: 299  NLRPTLAYKHSSLKNPRQFTRKASRDLFVQKFSCKSPVYHNCRIYANDGRMLCYCDRKKL 120
            NL+     KH+  KN +Q ++KASR+LFVQKFSCKSPVYHNCRIYANDGR+LCYCDR+KL
Sbjct: 466  NLKMMTISKHNDRKNAKQISKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKL 525

Query: 119  EWYLIRDLAKLIDEEPPAIMLLFEPKGRPEDEDNDFYIQ 3
            EWYL R+LA+L+ ++PPAI LLFEPKGRPEDE NDFYIQ
Sbjct: 526  EWYLRRELAELVADDPPAIKLLFEPKGRPEDEGNDFYIQ 564


>ref|XP_002881226.1| hypothetical protein ARALYDRAFT_320982 [Arabidopsis lyrata subsp.
            lyrata] gi|297327065|gb|EFH57485.1| hypothetical protein
            ARALYDRAFT_320982 [Arabidopsis lyrata subsp. lyrata]
          Length = 891

 Score =  273 bits (699), Expect = 2e-71
 Identities = 137/221 (61%), Positives = 166/221 (75%), Gaps = 5/221 (2%)
 Frame = -3

Query: 650  VRQLCAWRDLMARIHDESLKYVLSDQATVTLASQPPASRSEIYDTIVQTDINVEMG--LN 477
            VR+LCAWRDLM RIHDES +YVLSDQA V LA + P +  EIYDTI  TD+  E    L+
Sbjct: 356  VRKLCAWRDLMGRIHDESTRYVLSDQAIVGLACKQPTTNEEIYDTIAHTDLATESSPSLS 415

Query: 476  SFIXXXXXXXXSHLSDIYHLLANELVNHGDIYSNILQKCLGQNGSCKLNIFNYALLVN-- 303
            S +        SHL DIY ++ ++L    DI   +L+KCLG NG+C +++FNY+LLVN  
Sbjct: 416  SSVQSPYPVICSHLDDIYEMILDKLAKLDDILPVVLKKCLGTNGTCPISVFNYSLLVNFK 475

Query: 302  SNLRPTLAYKHSSLKN-PRQFTRKASRDLFVQKFSCKSPVYHNCRIYANDGRMLCYCDRK 126
            + L    A K +  KN  +QFTRKASR+LFV+KFSCK+PVYHNCRIYANDGR+LCYCD++
Sbjct: 476  TKLSSHSAPKQNGHKNFKQQFTRKASRELFVKKFSCKAPVYHNCRIYANDGRLLCYCDKR 535

Query: 125  KLEWYLIRDLAKLIDEEPPAIMLLFEPKGRPEDEDNDFYIQ 3
            KLEWYL R LAKL++E PPAIMLLFEPKGRPEDE NDFYIQ
Sbjct: 536  KLEWYLNRGLAKLVEENPPAIMLLFEPKGRPEDEGNDFYIQ 576


Top