BLASTX nr result

ID: Glycyrrhiza23_contig00024276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024276
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524107.1| PREDICTED: small RNA 2'-O-methyltransferase-...   184   9e-45
ref|XP_003532646.1| PREDICTED: small RNA 2'-O-methyltransferase-...   183   1e-44
ref|XP_002300565.1| hypothetical protein POPTRDRAFT_177484 [Popu...   103   1e-20
ref|XP_002330552.1| hypothetical protein POPTRDRAFT_270173 [Popu...   100   9e-20
ref|XP_002523181.1| conserved hypothetical protein [Ricinus comm...    98   6e-19

>ref|XP_003524107.1| PREDICTED: small RNA 2'-O-methyltransferase-like [Glycine max]
          Length = 945

 Score =  184 bits (466), Expect = 9e-45
 Identities = 91/115 (79%), Positives = 100/115 (86%)
 Frame = +2

Query: 5   FKSVIVPSEQLYETADNFSIQIFSKNLFREILAGQSIHNCQLNAIQCNKLLESIYMNSSH 184
           F+S+I+P EQLYETADNF+IQI+ KN+ R+ILAGQS HN QLN IQCN L+ESIYMNSS 
Sbjct: 500 FRSMILPFEQLYETADNFNIQIYFKNIIRDILAGQSTHNGQLNGIQCNNLVESIYMNSSC 559

Query: 185 DMLGNGVCSLKIEGPDSGVCPCNGSLPCISYSVSLVVEGENMKEVIEVCSEFEFE 349
           DMLGN V SLKIEGP SGVCP NGSLPCI YSVSL VEGEN+KEVIEVC EFEFE
Sbjct: 560 DMLGNIVHSLKIEGPYSGVCPSNGSLPCIRYSVSLAVEGENLKEVIEVCDEFEFE 614


>ref|XP_003532646.1| PREDICTED: small RNA 2'-O-methyltransferase-like [Glycine max]
          Length = 945

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/115 (77%), Positives = 100/115 (86%)
 Frame = +2

Query: 5   FKSVIVPSEQLYETADNFSIQIFSKNLFREILAGQSIHNCQLNAIQCNKLLESIYMNSSH 184
           FKS+I+P EQLYET DNF+IQI+SKN+ R++LAGQS HN QLN I CNK +ESIYMNSS+
Sbjct: 499 FKSMILPFEQLYETVDNFNIQIYSKNIIRDLLAGQSTHNGQLNGIHCNKFVESIYMNSSY 558

Query: 185 DMLGNGVCSLKIEGPDSGVCPCNGSLPCISYSVSLVVEGENMKEVIEVCSEFEFE 349
           DMLGN V SLKIEGP SGVCP +GSLPCI YSVSL VEGEN+KEVIEVC EFEFE
Sbjct: 559 DMLGNIVDSLKIEGPYSGVCPSSGSLPCIRYSVSLAVEGENLKEVIEVCDEFEFE 613


>ref|XP_002300565.1| hypothetical protein POPTRDRAFT_177484 [Populus trichocarpa]
           gi|222847823|gb|EEE85370.1| hypothetical protein
           POPTRDRAFT_177484 [Populus trichocarpa]
          Length = 926

 Score =  103 bits (257), Expect = 1e-20
 Identities = 57/116 (49%), Positives = 72/116 (62%)
 Frame = +2

Query: 2   YFKSVIVPSEQLYETADNFSIQIFSKNLFREILAGQSIHNCQLNAIQCNKLLESIYMNSS 181
           YFK + +P E+L  +AD   I + S+N  +E    QS+HN Q +  Q +KL ES   N  
Sbjct: 502 YFKDLGMPLEKLKCSADALDISLSSENFLKEFALCQSLHNVQQSRCQGSKLPESKSTNME 561

Query: 182 HDMLGNGVCSLKIEGPDSGVCPCNGSLPCISYSVSLVVEGENMKEVIEVCSEFEFE 349
           + + G  VC   IEG  SGVCP NGSL CISY+VSLV EG + KE+IE   EFEFE
Sbjct: 562 YTLSGQDVCLPNIEGSYSGVCPSNGSLLCISYTVSLVTEGGHTKELIESKDEFEFE 617


>ref|XP_002330552.1| hypothetical protein POPTRDRAFT_270173 [Populus trichocarpa]
           gi|222872110|gb|EEF09241.1| hypothetical protein
           POPTRDRAFT_270173 [Populus trichocarpa]
          Length = 916

 Score =  100 bits (250), Expect = 9e-20
 Identities = 57/116 (49%), Positives = 70/116 (60%)
 Frame = +2

Query: 2   YFKSVIVPSEQLYETADNFSIQIFSKNLFREILAGQSIHNCQLNAIQCNKLLESIYMNSS 181
           YFK + +P E+L  +AD   I    +N  +E    QSIHN Q +  Q +KL ES   +  
Sbjct: 490 YFKDLGMPLEKLNCSADALDISFSLENFHKEFALSQSIHNVQQSGTQGSKLPESKSTDMQ 549

Query: 182 HDMLGNGVCSLKIEGPDSGVCPCNGSLPCISYSVSLVVEGENMKEVIEVCSEFEFE 349
           + + G  VC   IEG DSGV P NGSL CISYSVSLV EG + KE+IE   EFEFE
Sbjct: 550 YTLSGQDVCLPNIEGSDSGVFPSNGSLLCISYSVSLVTEGGHTKELIESKDEFEFE 605


>ref|XP_002523181.1| conserved hypothetical protein [Ricinus communis]
           gi|223537588|gb|EEF39212.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 970

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/116 (47%), Positives = 69/116 (59%)
 Frame = +2

Query: 2   YFKSVIVPSEQLYETADNFSIQIFSKNLFREILAGQSIHNCQLNAIQCNKLLESIYMNSS 181
           YFK   +P E+L  +A    IQ   +N F+E     S+H  Q    Q   L E+I +N  
Sbjct: 523 YFKDPGMPVEKLNHSASVLDIQFCPENFFKEFSLCPSVHTLQHEGKQEGTLPEAISVNVP 582

Query: 182 HDMLGNGVCSLKIEGPDSGVCPCNGSLPCISYSVSLVVEGENMKEVIEVCSEFEFE 349
           +  LG  V S  IEG DSGVCP NGSL CISY VSLV EG++ KE++E  +EFEFE
Sbjct: 583 YASLGQNVFSFNIEGSDSGVCPSNGSLLCISYFVSLVSEGKHTKELLESNAEFEFE 638


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