BLASTX nr result

ID: Glycyrrhiza23_contig00024266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024266
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608458.1| hypothetical protein MTR_4g095320 [Medicago ...    94   2e-17
ref|XP_002303381.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002307294.1| predicted protein [Populus trichocarpa] gi|2...    62   9e-08

>ref|XP_003608458.1| hypothetical protein MTR_4g095320 [Medicago truncatula]
           gi|355509513|gb|AES90655.1| hypothetical protein
           MTR_4g095320 [Medicago truncatula]
          Length = 339

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 74/174 (42%), Positives = 95/174 (54%), Gaps = 7/174 (4%)
 Frame = -1

Query: 558 NRGRKSSSLELFRLGVVPAPEIIGMQDLNNVRSTTNSSVVNGLNANSTTT-------SVK 400
           ++ RKSS  E+FRLGVVP PEI G+QDL    S++N + V+  +++S++        S K
Sbjct: 183 SQSRKSSVWEIFRLGVVPTPEI-GLQDLKVRSSSSNKNCVSRNSSSSSSNNSTFNDKSGK 241

Query: 399 MSYDNDTNHSGKRNRFFKQLVGKGGGLWSGCKCSVETVQSNNVIMIRSXXXXXXXXXXXX 220
           MS  N+  +  K N   K LVG  GGL SGC CS+ETV       I+S            
Sbjct: 242 MSKKNE--NGDKSNHVLKNLVGIRGGLLSGCDCSIETV-------IKS------GYKTEN 286

Query: 219 XXXHAVKEKVFELXXXXXXXXXXXKTMLRHRTLEWIKELSHVSYPEDEALLSNS 58
              HAVKEKV E            K M R RT EW+KEL H S+ ++EALLSNS
Sbjct: 287 TTKHAVKEKV-EWKKQKQRQKQGKKVMSRRRTFEWLKEL-HASHADEEALLSNS 338


>ref|XP_002303381.1| predicted protein [Populus trichocarpa] gi|222840813|gb|EEE78360.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 66/195 (33%), Positives = 97/195 (49%), Gaps = 30/195 (15%)
 Frame = -1

Query: 570 SSFGN----RGRKSSSLELFRLGVVPAPEIIGMQDL--------NNVRSTTNSSV----- 442
           +S GN    + R SS  + FRLG+V  PEI   QDL        N+  S++NSS+     
Sbjct: 191 ASLGNAASSKPRNSSVWDFFRLGLVRTPEI-EFQDLKVRNYVSRNSSSSSSNSSINKCSK 249

Query: 441 VNGLNANSTTT-SVKMSYDNDTNHSGKRNRFFKQLVGKGGGLWSGCKCSVETVQ----SN 277
           +N  N NS ++  +K    +++N SGK+    + L+ K GGL SGC CSV TV+    +N
Sbjct: 250 INVSNGNSKSSRKIKNESRHNSNDSGKKMGK-RSLLEKRGGLLSGCSCSVSTVKPVPLNN 308

Query: 276 NVIMI-----RSXXXXXXXXXXXXXXXHAVKEKVFELXXXXXXXXXXXK---TMLRHRTL 121
           N++++     RS                 ++EK+ EL           +    M RHRT 
Sbjct: 309 NIVVVKSSNSRSHSAGNGNNDKGERGSMELEEKLQELKMKKRMVQKQQEGKQAMSRHRTF 368

Query: 120 EWIKELSHVSYPEDE 76
           EWIK+LSH +Y + E
Sbjct: 369 EWIKDLSHATYLDHE 383


>ref|XP_002307294.1| predicted protein [Populus trichocarpa] gi|222856743|gb|EEE94290.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 53/181 (29%), Positives = 76/181 (41%), Gaps = 24/181 (13%)
 Frame = -1

Query: 558 NRGRKSSSLELFRLGVVPAPEIIGMQDLNNVRSTTNSSVVNGLNANSTTTSV-KMSYDND 382
           NR R SS  +LFRLG++  PEI  +QDL    S + +S  +   +NS+     K++  +D
Sbjct: 195 NRPRNSSFWDLFRLGLIRTPEI-ELQDLKVRNSVSRNSSSSSSKSNSSIKKCGKINVSSD 253

Query: 381 TNHSGKR-----------------NRFFKQLVGKGGGLWSGCKCSVETVQSNNVIMIRSX 253
           ++ SG +                  R  + L+ K  GL SGC CSV  V+   +      
Sbjct: 254 SSKSGCKIKNMSRHNSNDCGKNMEKRRKQSLLQKREGLLSGCSCSVSAVKPFPLKSSNDR 313

Query: 252 XXXXXXXXXXXXXXHAVKEKVFELXXXXXXXXXXXK------TMLRHRTLEWIKELSHVS 91
                          + +EK+ EL                   M RHRT EWIKEL H +
Sbjct: 314 SRSAGNGNNDKSERGSTEEKLQELKMKRRIVKKQLMQQQGKQAMSRHRTFEWIKELPHAT 373

Query: 90  Y 88
           Y
Sbjct: 374 Y 374


Top