BLASTX nr result

ID: Glycyrrhiza23_contig00024238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00024238
         (925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540267.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   541   e-151
ref|XP_003543403.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   540   e-151
ref|XP_003596922.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   498   e-139
ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   482   e-134
ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putat...   470   e-130

>ref|XP_003540267.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Glycine max]
          Length = 874

 Score =  541 bits (1393), Expect = e-151
 Identities = 268/308 (87%), Positives = 276/308 (89%)
 Frame = -2

Query: 924  FGVRISKKDNAVELYKRACKMFSVDSEMLRIWDFSGQITLFFMNDKNHVPIDCQRQPDQE 745
            FGVRISKKDNAVEL+KRACKMFSVDSEML IWD+S QIT F MND N VP+DCQRQ DQE
Sbjct: 154  FGVRISKKDNAVELFKRACKMFSVDSEMLCIWDYSDQIT-FLMNDNNQVPVDCQRQSDQE 212

Query: 744  ILLELQVYGLSDSMRCKEGKKDETGNFSGSASLKMNGTADILNSDYMRANSLTFSSGPGE 565
            ILLELQVYGLSDS+RC+EGKKDE  NFSGSASLKMNGT D  NSD M ANSLTFSSGPGE
Sbjct: 213  ILLELQVYGLSDSIRCREGKKDEMANFSGSASLKMNGTYDGANSDCMNANSLTFSSGPGE 272

Query: 564  AXXXXXXXXXXXXXTCFMNSSLQCLAHTPKLVDYFLEDYGREINHDNPLGMNGEIALAFG 385
            A             TCFMNSSLQCLAHTPKLVDYFLEDY REINHDNPLGMNGEIALAFG
Sbjct: 273  AGSLGLTGLQNLGNTCFMNSSLQCLAHTPKLVDYFLEDYIREINHDNPLGMNGEIALAFG 332

Query: 384  ELLRNLWAPGASPVAPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKP 205
            +LLR LWAPGASPV+PR FKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKP
Sbjct: 333  DLLRKLWAPGASPVSPRIFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKP 392

Query: 204  YMEAKDGDGRPDEEVADEYWHNHLARNDSVIVDVCQGQYKSTLVCPVCRKVSVTFDPFMY 25
            Y+E KDGDGR DEEVADEYWHNHLARNDSVIVDVCQGQYKSTLVCPVCRKVSVTFDPFMY
Sbjct: 393  YIEVKDGDGRRDEEVADEYWHNHLARNDSVIVDVCQGQYKSTLVCPVCRKVSVTFDPFMY 452

Query: 24   LSLPLPST 1
            LSLPLPST
Sbjct: 453  LSLPLPST 460


>ref|XP_003543403.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Glycine max]
          Length = 872

 Score =  540 bits (1390), Expect = e-151
 Identities = 267/308 (86%), Positives = 276/308 (89%)
 Frame = -2

Query: 924  FGVRISKKDNAVELYKRACKMFSVDSEMLRIWDFSGQITLFFMNDKNHVPIDCQRQPDQE 745
            FGVRISKKDNAVEL+KRACKMFSVDSE L +WD+S QIT F MNDKN VP+DCQRQ DQE
Sbjct: 153  FGVRISKKDNAVELFKRACKMFSVDSETLCMWDYSDQIT-FLMNDKNQVPVDCQRQSDQE 211

Query: 744  ILLELQVYGLSDSMRCKEGKKDETGNFSGSASLKMNGTADILNSDYMRANSLTFSSGPGE 565
            ILLELQVYGLSDS+RC+EGKKDE  NFSGSASLKMN T D  NSD M +NSLTFSSGPGE
Sbjct: 212  ILLELQVYGLSDSIRCREGKKDEMANFSGSASLKMNDTYDGANSDCMNSNSLTFSSGPGE 271

Query: 564  AXXXXXXXXXXXXXTCFMNSSLQCLAHTPKLVDYFLEDYGREINHDNPLGMNGEIALAFG 385
            A             TCFMNSSLQCLAHTPKLVDYFLEDY REINHDNPLGMNGEIALAFG
Sbjct: 272  AGSLGLTGLQNLGNTCFMNSSLQCLAHTPKLVDYFLEDYIREINHDNPLGMNGEIALAFG 331

Query: 384  ELLRNLWAPGASPVAPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKP 205
            +LLR LWAPGASPVAPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKP
Sbjct: 332  DLLRKLWAPGASPVAPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKP 391

Query: 204  YMEAKDGDGRPDEEVADEYWHNHLARNDSVIVDVCQGQYKSTLVCPVCRKVSVTFDPFMY 25
            Y+E KDGD RPDEEVADEYWHNHLARNDSVIVDVCQGQYKSTLVCPVCRKVSVTFDPFMY
Sbjct: 392  YIEVKDGDDRPDEEVADEYWHNHLARNDSVIVDVCQGQYKSTLVCPVCRKVSVTFDPFMY 451

Query: 24   LSLPLPST 1
            LSLPLPST
Sbjct: 452  LSLPLPST 459


>ref|XP_003596922.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
            gi|355485970|gb|AES67173.1| Ubiquitin carboxyl-terminal
            hydrolase [Medicago truncatula]
          Length = 871

 Score =  498 bits (1283), Expect = e-139
 Identities = 253/308 (82%), Positives = 263/308 (85%)
 Frame = -2

Query: 924  FGVRISKKDNAVELYKRACKMFSVDSEMLRIWDFSGQITLFFMNDKNHVPIDCQRQPDQE 745
            F VRISKKDN VELYKRACK+FSVDSEMLRI D+SG ITL F + +NHVP D QRQ DQE
Sbjct: 155  FEVRISKKDNTVELYKRACKLFSVDSEMLRILDYSGHITLLFSDGENHVPTDFQRQSDQE 214

Query: 744  ILLELQVYGLSDSMRCKEGKKDETGNFSGSASLKMNGTADILNSDYMRANSLTFSSGPGE 565
             LLELQVYGLSDSMRC+EGKKD     SGSAS+KMNGTAD       RA+SLTF  GPGE
Sbjct: 215  NLLELQVYGLSDSMRCREGKKD-----SGSASMKMNGTADCT-----RASSLTFCLGPGE 264

Query: 564  AXXXXXXXXXXXXXTCFMNSSLQCLAHTPKLVDYFLEDYGREINHDNPLGMNGEIALAFG 385
            A             TCFMNSSLQCL HTPKLVDYFLEDY REIN DNPLGMNGEIA AFG
Sbjct: 265  AGSLGLTGLQNLGNTCFMNSSLQCLTHTPKLVDYFLEDYSREINSDNPLGMNGEIASAFG 324

Query: 384  ELLRNLWAPGASPVAPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKP 205
            +LLR LWAPGASPVAPR FKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKP
Sbjct: 325  DLLRKLWAPGASPVAPRMFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKP 384

Query: 204  YMEAKDGDGRPDEEVADEYWHNHLARNDSVIVDVCQGQYKSTLVCPVCRKVSVTFDPFMY 25
            Y+EAKDGDGRPDEEVADEYW+ HLARNDSVIVDVCQGQYKSTLVCPVCRKVSVTFDPFMY
Sbjct: 385  YVEAKDGDGRPDEEVADEYWNYHLARNDSVIVDVCQGQYKSTLVCPVCRKVSVTFDPFMY 444

Query: 24   LSLPLPST 1
            LSLPLPST
Sbjct: 445  LSLPLPST 452


>ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Vitis
            vinifera]
          Length = 882

 Score =  482 bits (1240), Expect = e-134
 Identities = 237/314 (75%), Positives = 264/314 (84%), Gaps = 7/314 (2%)
 Frame = -2

Query: 921  GVRISKKDNAVELYKRACKMFSVDSEMLRIWDFSGQITLFFMNDKNHVPIDCQRQPDQEI 742
            GV+I+KKDNAVE ++RACK+FSV+SE+L IWDFSGQ TLFF+NDKN +P DCQRQ DQEI
Sbjct: 152  GVKITKKDNAVEFFRRACKIFSVESELLHIWDFSGQTTLFFINDKNKLPKDCQRQSDQEI 211

Query: 741  LLELQVYGLSDSMRCKEGKKDETG----NFSGS---ASLKMNGTADILNSDYMRANSLTF 583
            LLELQVYGLSDS+RC+EGKKDE      N +GS   ASL MNG+   +NS+ +  NS  F
Sbjct: 212  LLELQVYGLSDSLRCREGKKDEMAAQHSNLAGSSCGASLMMNGSLACMNSNSVHTNSPVF 271

Query: 582  SSGPGEAXXXXXXXXXXXXXTCFMNSSLQCLAHTPKLVDYFLEDYGREINHDNPLGMNGE 403
                GEA             TCFMNSSLQCLAHTPKLVDYFL DY REINH+N LGM+GE
Sbjct: 272  YGSSGEAGSLGLTGLQNLGNTCFMNSSLQCLAHTPKLVDYFLGDYSREINHENALGMDGE 331

Query: 402  IALAFGELLRNLWAPGASPVAPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLN 223
            IALAFG+L+R LWAPGA+PVAPR FKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLN
Sbjct: 332  IALAFGDLIRKLWAPGATPVAPRMFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLN 391

Query: 222  RVKCKPYMEAKDGDGRPDEEVADEYWHNHLARNDSVIVDVCQGQYKSTLVCPVCRKVSVT 43
            RVKCKPY+EAKDG+G PDEEVADEYW NHLARNDS+IVDV QGQY+STLVCPVC+KVS+T
Sbjct: 392  RVKCKPYIEAKDGEGWPDEEVADEYWRNHLARNDSIIVDVSQGQYRSTLVCPVCKKVSIT 451

Query: 42   FDPFMYLSLPLPST 1
            FDPFMYLSLPLPST
Sbjct: 452  FDPFMYLSLPLPST 465


>ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
            gi|223545031|gb|EEF46545.1| Ubiquitin carboxyl-terminal
            hydrolase, putative [Ricinus communis]
          Length = 889

 Score =  470 bits (1209), Expect = e-130
 Identities = 230/313 (73%), Positives = 261/313 (83%), Gaps = 6/313 (1%)
 Frame = -2

Query: 921  GVRISKKDNAVELYKRACKMFSVDSEMLRIWDFSGQITLFFMNDKNHVPIDCQRQPDQEI 742
            GV+ISKK+NA EL++RACK+FSVDSEMLRIWDFSGQ TLFF+NDK+  P + QRQ DQEI
Sbjct: 159  GVKISKKENATELFRRACKIFSVDSEMLRIWDFSGQTTLFFVNDKSKSPKESQRQLDQEI 218

Query: 741  LLELQVYGLSDSMRCKEGKKDET------GNFSGSASLKMNGTADILNSDYMRANSLTFS 580
            +LELQVYGLSD+M+C++GKKD+       G  S   SL MNG+    ++ + R +S    
Sbjct: 219  VLELQVYGLSDNMKCRDGKKDDAVAQNCNGTHSSGTSL-MNGSVSNTSTSFFRCDSSALF 277

Query: 579  SGPGEAXXXXXXXXXXXXXTCFMNSSLQCLAHTPKLVDYFLEDYGREINHDNPLGMNGEI 400
               GEA             TCFMNS++QCLAHTPKLVDYFL DYGREINHDNPLGM+GEI
Sbjct: 278  GKSGEAGSLGLTGLQNLGNTCFMNSAIQCLAHTPKLVDYFLGDYGREINHDNPLGMDGEI 337

Query: 399  ALAFGELLRNLWAPGASPVAPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNR 220
            ALAFG+LLR LWAPGA+PVAPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNR
Sbjct: 338  ALAFGDLLRKLWAPGATPVAPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNR 397

Query: 219  VKCKPYMEAKDGDGRPDEEVADEYWHNHLARNDSVIVDVCQGQYKSTLVCPVCRKVSVTF 40
            VK KPY+EAKDG+GR DEEVADEYW NH+ARNDS+IVD+CQGQYKSTLVCP+C+KVSVTF
Sbjct: 398  VKSKPYVEAKDGEGRLDEEVADEYWQNHVARNDSIIVDICQGQYKSTLVCPICKKVSVTF 457

Query: 39   DPFMYLSLPLPST 1
            DPFMYLSLPLPST
Sbjct: 458  DPFMYLSLPLPST 470


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